FiT-DB / Search/ Help/ Sample detail

Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os01g0657100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Mycorrhiza-inducible inorganic phosphate transporter (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.18 (0.022) R2 : 0.0285
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.17 (0.0463) R2dN8 : 0.0369 R2N8 : 0.0285
σ : 0.414
deviance : 78.86
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
72.36 0.4 3.14 0.522 0.191 -0.294 -0.024 2.67 0.277 7.42 25.1 89 -- --
74.85 0.406 3.18 0.197 0.217 -0.0234 -0.422 -- 0.186 5.83 25.1 89 -- --
72.36 0.396 3.14 0.523 0.19 -0.295 -- 2.68 0.278 7.45 25.1 89 -- --
75.09 0.406 3.17 0.187 0.234 0.106 -- -- 0.191 6.38 30.2 593 -- --
73.48 0.399 3.13 0.603 -- -0.481 -- 3.33 0.291 -- 25.6 251 -- --
74.86 0.406 3.18 0.194 0.223 -- -0.425 -- 0.185 5.76 -- -- -- --
75.19 0.406 3.18 0.192 0.225 -- -- -- 0.187 6.51 -- -- -- --
76.49 0.407 3.17 0.245 -- -0.22 -- -- 0.222 -- 23.1 558 -- --
76.01 0.408 3.18 -- 0.239 0.137 -- -- 0.171 6.3 30.2 593 -- --
77.82 0.412 3.18 0.198 -- -- -- -- 0.192 -- -- -- -- --
76.16 0.408 3.18 -- 0.228 -- -- -- 0.165 6.46 -- -- -- --
77.92 0.411 3.18 -- -- -0.179 -- -- 0.177 -- 25.2 509 -- --
78.86 0.414 3.18 -- -- -- -- -- 0.17 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 67.73 wind 1.0 10 < th dose dependent rect. 9 1
3 68.01 wind 1.0 30 < th dose independent rect. 9 1
4 68.05 radiation 10.0 10 < th dose independent rect. 8 3
5 68.06 radiation 10.0 10 < th dose independent rect. 9 1
12 68.14 radiation 10.0 10 < th dose dependent rect. 10 1
44 70.26 atmosphere 1005.0 10 > th dose dependent rect. 2 3
51 70.71 temperature 25.0 720 > th dose independent rect. 5 5
52 70.71 temperature 25.0 720 > th dose dependent rect. 4 6
63 70.82 temperature 25.0 270 > th dose independent rect. 1 1
71 70.90 temperature 25.0 90 > th dose independent rect. 1 3
74 70.91 temperature 25.0 90 > th dose dependent rect. 2 2
76 70.93 atmosphere 995.0 720 > th dose independent rect. 23 16
79 70.96 temperature 25.0 720 > th dose independent rect. 8 1
86 71.00 temperature 25.0 90 > th dose dependent rect. 1 4
110 71.18 atmosphere 1000.0 30 > th dose independent rect. 3 23
118 71.23 atmosphere 1015.0 30 < th dose dependent rect. 2 1
125 71.26 wind 3.0 30 < th dose independent rect. 2 1
129 71.27 wind 3.0 30 < th dose dependent rect. 2 1
133 71.27 temperature 10.0 30 > th dose dependent rect. 2 1
136 71.27 humidity 80.0 30 > th dose dependent rect. 2 1
141 71.28 temperature 10.0 30 > th dose independent rect. 2 1
143 71.28 temperature 30.0 30 < th dose independent rect. 2 1
144 71.28 humidity 50.0 30 > th dose independent rect. 2 1
148 71.28 atmosphere 995.0 30 > th dose independent rect. 2 1
149 71.28 atmosphere 1010.0 30 < th dose independent rect. 2 1
151 71.28 radiation 1.0 30 < th dose independent rect. 2 1
156 71.28 precipitation 0.1 30 < th dose independent rect. 2 1
157 71.28 temperature 10.0 30 > th dose independent rect. 3 23
159 71.28 humidity 50.0 30 > th dose dependent rect. 2 1
162 71.28 radiation 1.0 30 < th dose dependent rect. 2 1
167 71.28 precipitation 0.1 30 < th dose dependent rect. 2 1
186 71.32 temperature 30.0 30 < th dose dependent rect. 2 1
187 71.32 atmosphere 995.0 30 > th dose dependent rect. 2 1
189 71.33 atmosphere 1005.0 30 > th dose independent rect. 2 1
190 71.33 wind 9.0 30 < th dose independent rect. 3 23
198 71.36 wind 1.0 30 > th dose independent rect. 2 1
220 71.36 temperature 10.0 720 > th dose independent rect. 15 8
221 71.36 temperature 10.0 720 > th dose independent rect. 23 16
244 71.41 radiation 10.0 10 < th dose independent rect. 6 5
251 71.43 temperature 25.0 90 > th dose independent rect. 8 3
259 71.49 humidity 90.0 270 < th dose independent rect. 1 1
261 71.50 temperature 10.0 720 > th dose independent rect. 3 8
262 71.50 atmosphere 995.0 720 > th dose independent rect. 3 8
263 71.50 temperature 10.0 720 > th dose independent rect. 11 16
264 71.51 wind 9.0 720 < th dose independent rect. 3 8
275 71.60 humidity 50.0 720 > th dose independent rect. 3 8
283 71.68 temperature 30.0 14400 > th dose independent rect. 17 1
291 71.74 temperature 30.0 14400 < th dose independent rect. 17 1
292 71.74 precipitation 0.1 720 < th dose independent rect. 3 8
294 71.74 precipitation 0.1 720 < th dose dependent rect. 3 8
296 71.75 precipitation 0.1 720 < th dose independent rect. 15 8
297 71.75 precipitation 0.1 720 < th dose dependent rect. 15 8
306 71.80 temperature 25.0 90 > th dose independent rect. 5 6
310 71.80 temperature 25.0 30 > th dose dependent rect. 16 21
324 71.81 temperature 30.0 14400 < th dose independent rect. 17 13
328 71.82 temperature 30.0 14400 < th dose independent rect. 17 7
330 71.82 temperature 30.0 14400 < th dose independent rect. 17 11
334 71.82 wind 3.0 14400 > th dose dependent rect. 12 1
337 71.83 temperature 30.0 14400 < th dose independent rect. 17 4
344 71.84 atmosphere 1005.0 10 > th dose independent rect. 2 3
349 71.86 precipitation 0.1 720 < th dose independent rect. 23 16
353 71.86 precipitation 0.1 720 < th dose dependent rect. 23 16
359 71.88 humidity 90.0 90 < th dose independent rect. 1 4
361 71.89 temperature 25.0 90 > th dose dependent rect. 14 23
363 71.90 atmosphere 1000.0 10 > th dose independent rect. 5 21
364 71.90 temperature 30.0 14400 > th dose dependent rect. 17 1
367 71.93 atmosphere 995.0 4320 > th dose independent rect. 11 3
387 71.98 atmosphere 1000.0 10 > th dose independent rect. 16 10
389 71.98 radiation 1.0 4320 < th dose dependent rect. 24 2
392 71.99 wind 3.0 43200 < th dose independent rect. 9 4
393 71.99 wind 3.0 43200 > th dose independent rect. 9 5
394 71.99 atmosphere 1015.0 720 < th dose independent rect. 3 8
398 72.00 wind 3.0 43200 < th dose independent rect. 10 2
426 72.01 temperature 25.0 90 > th dose dependent rect. 23 20
456 72.02 temperature 10.0 30 > th dose dependent rect. 5 21
457 72.03 atmosphere 995.0 4320 > th dose independent rect. 14 1
461 72.03 precipitation 0.1 30 < th dose independent rect. 3 23
465 72.03 precipitation 0.1 30 < th dose dependent rect. 3 23
466 72.04 wind 3.0 43200 > th dose independent rect. 11 1
469 72.04 atmosphere 995.0 4320 < th dose dependent rect. 14 1
481 72.05 atmosphere 1000.0 30 > th dose independent rect. 10 22
531 72.09 atmosphere 995.0 4320 > th dose independent rect. 14 3
532 72.09 wind 3.0 43200 < th dose independent rect. 20 4
533 72.09 temperature 25.0 90 > th dose independent rect. 24 11
534 72.09 precipitation 0.1 720 < th dose independent rect. 11 16
537 72.09 humidity 80.0 10 > th dose dependent rect. 10 1
541 72.09 wind 5.0 43200 < th dose dependent rect. 9 5
555 72.09 precipitation 0.1 720 < th dose dependent rect. 11 16
558 72.10 atmosphere 995.0 4320 < th dose independent rect. 14 1
569 72.10 wind 9.0 14400 < th dose dependent rect. 12 1
572 72.10 temperature 20.0 90 > th dose dependent rect. 9 2
576 72.11 atmosphere 995.0 4320 > th dose independent rect. 12 5
592 72.13 radiation 1.0 4320 < th dose dependent rect. 19 8
594 72.14 wind 3.0 43200 > th dose independent rect. 20 4
597 72.14 atmosphere 1000.0 10 > th dose independent rect. 10 16
598 72.14 humidity 80.0 4320 < th dose dependent rect. 1 1
599 72.14 humidity 60.0 10 > th dose dependent rect. 8 2
613 72.16 radiation 40.0 720 < th dose independent rect. 15 8
615 72.16 temperature 30.0 14400 > th dose dependent sin 12 NA
640 72.17 radiation 10.0 10 < th dose independent rect. 16 10
655 72.18 temperature 25.0 90 > th dose dependent rect. 5 14
667 72.20 wind 3.0 43200 < th dose dependent rect. 9 2
673 72.20 radiation 1.0 4320 < th dose dependent rect. 22 5
684 72.22 temperature 30.0 14400 > th dose independent sin 12 NA
693 72.23 temperature 30.0 14400 < th dose independent sin 12 NA
698 72.23 temperature 30.0 10 < th dose independent rect. 2 14
699 72.23 precipitation 0.1 10 < th dose independent rect. 2 14
701 72.23 temperature 25.0 720 > th dose dependent sin 7 NA
710 72.23 precipitation 0.1 10 < th dose dependent rect. 2 14
734 72.24 temperature 25.0 14400 > th dose dependent rect. 23 1
763 72.25 temperature 25.0 720 < th dose independent rect. 2 9
764 72.25 wind 9.0 10 < th dose independent rect. 16 10
775 72.25 wind 9.0 14400 > th dose dependent rect. 19 19
840 72.28 temperature 25.0 90 > th dose dependent rect. 8 23
848 72.29 wind 5.0 14400 > th dose dependent rect. 8 8
859 72.30 temperature 10.0 10 > th dose independent rect. 16 10
862 72.30 temperature 10.0 10 > th dose independent rect. 2 14
864 72.30 atmosphere 1000.0 10 > th dose independent rect. 2 14
865 72.30 atmosphere 1015.0 10 < th dose independent rect. 2 14
881 72.31 humidity 60.0 10 > th dose dependent rect. 10 1
923 72.32 radiation 40.0 10 < th dose dependent rect. 16 10
924 72.32 temperature 25.0 90 > th dose dependent rect. 8 11
930 72.32 temperature 25.0 90 > th dose dependent rect. 5 20
956 72.33 precipitation 0.1 10 < th dose independent rect. 16 10
959 72.33 temperature 25.0 270 > th dose dependent sin 3 NA
974 72.33 precipitation 0.1 10 < th dose dependent rect. 16 10
989 72.34 radiation 10.0 10 < th dose independent rect. 14 12
994 72.34 radiation 1.0 43200 < th dose dependent rect. 3 1