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Os01g0655800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Acyl-CoA synthetase (EC 6.2.1.3).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.7 (0.0139) R2 : 0.146
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.258 (0.0293) R2dN8 : 0.188 R2N8 : 0.146
σ : 0.262
deviance : 31.46
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
19.64 0.208 12.7 0.481 0.348 -0.255 0.00637 0.748 0.325 19.6 92.06 1223 -- --
20.36 0.21 12.7 0.413 0.351 -0.205 0.0716 -- 0.317 19.6 99.9 1216 -- --
19.64 0.206 12.7 0.482 0.349 -0.255 -- 0.752 0.325 19.6 91.56 1216 -- --
20.36 0.21 12.7 0.407 0.367 -0.215 -- -- 0.314 19.7 95.3 1116 -- --
25.82 0.237 12.7 0.499 -- -0.27 -- 0.767 0.324 -- 91.99 1344 -- --
21.13 0.215 12.7 0.396 0.346 -- -0.0134 -- 0.308 19.1 -- -- -- --
21.13 0.215 12.7 0.396 0.346 -- -- -- 0.308 19.2 -- -- -- --
26.49 0.24 12.7 0.407 -- -0.205 -- -- 0.307 -- 92 1378 -- --
20.67 0.212 12.7 -- 0.373 -0.491 -- -- 0.29 19.4 76.26 35430 -- --
27.46 0.245 12.7 0.389 -- -- -- -- 0.302 -- -- -- -- --
25.26 0.235 12.8 -- 0.342 -- -- -- 0.264 19.2 -- -- -- --
26.75 0.241 12.7 -- -- -0.494 -- -- 0.274 -- 75.37 34508 -- --
31.46 0.262 12.7 -- -- -- -- -- 0.258 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 19.33 wind 3 14400 < th dose dependent rect. 9 2
2 19.39 atmosphere 1005 30 > th dose independent rect. 22 9
4 19.40 atmosphere 1005 90 > th dose independent rect. 22 11
5 19.41 atmosphere 1005 270 > th dose independent rect. 22 8
9 19.43 atmosphere 1005 270 > th dose independent sin 9 NA
11 19.43 atmosphere 995 43200 > th dose independent rect. 23 1
12 19.43 atmosphere 995 43200 < th dose independent rect. 21 1
15 19.43 atmosphere 995 43200 > th dose independent rect. 20 2
28 19.43 atmosphere 995 43200 < th dose dependent rect. 21 1
66 19.51 wind 3 14400 < th dose independent rect. 9 2
76 19.53 wind 1 14400 < th dose dependent rect. 1 1
87 19.55 humidity 90 720 < th dose independent rect. 22 1
93 19.56 wind 3 14400 > th dose independent rect. 9 2
115 19.59 atmosphere 1005 270 > th dose dependent rect. 23 7
126 19.61 atmosphere 1010 30 < th dose dependent rect. 5 6
129 19.62 atmosphere 1005 270 < th dose independent rect. 1 7
147 19.63 atmosphere 1010 30 < th dose independent rect. 5 17
150 19.64 radiation 10 1440 < th dose independent rect. 15 1
156 19.65 humidity 90 720 < th dose independent rect. 21 4
175 19.66 humidity 90 720 < th dose independent sin 14 NA
190 19.67 radiation 40 43200 > th dose independent rect. 14 1
192 19.67 atmosphere 1005 270 < th dose independent rect. 3 4
204 19.67 humidity 50 10 > th dose dependent rect. 7 15
206 19.68 humidity 70 1440 > th dose independent rect. 11 2
207 19.68 radiation 10 1440 > th dose independent rect. 15 2
210 19.68 humidity 90 720 < th dose independent rect. 17 8
218 19.68 humidity 90 720 < th dose independent rect. 17 14
219 19.68 radiation 30 43200 > th dose independent rect. 15 17
276 19.71 humidity 90 720 < th dose independent rect. 13 18
279 19.71 atmosphere 1010 270 < th dose dependent rect. 5 1
285 19.72 atmosphere 1005 270 < th dose independent rect. 5 1
312 19.72 radiation 30 1440 > th dose independent rect. 15 17
350 19.74 wind 7 30 < th dose independent rect. 7 15
353 19.74 radiation 10 43200 > th dose independent rect. 15 16
363 19.74 wind 9 30 < th dose dependent rect. 7 15
364 19.74 humidity 90 1440 < th dose dependent rect. 10 21
365 19.75 radiation 10 43200 > th dose independent sin 14 NA
367 19.75 radiation 10 43200 > th dose independent rect. 15 2
373 19.75 humidity 90 720 < th dose independent rect. 13 13
384 19.75 radiation 30 1440 < th dose dependent rect. 15 2
390 19.75 atmosphere 1015 30 < th dose dependent rect. 5 17
395 19.76 atmosphere 995 43200 > th dose independent rect. 5 1
431 19.76 radiation 1 1440 > th dose dependent rect. 15 2
435 19.76 humidity 90 1440 < th dose dependent rect. 10 18
440 19.77 atmosphere 995 43200 > th dose independent rect. 3 1
444 19.77 radiation 30 1440 > th dose independent rect. 15 2
476 19.77 humidity 90 1440 < th dose dependent rect. 10 16
479 19.77 humidity 50 1440 > th dose dependent rect. 10 20
482 19.77 humidity 90 1440 < th dose dependent rect. 19 22
484 19.78 atmosphere 995 43200 > th dose independent rect. 1 1
486 19.78 atmosphere 995 43200 < th dose independent rect. 1 1
492 19.78 temperature 30 4320 > th dose independent rect. 14 2
522 19.78 radiation 10 43200 > th dose independent rect. 13 5
559 19.78 atmosphere 1000 30 > th dose independent rect. 7 15
561 19.78 radiation 10 1440 > th dose independent rect. 15 15
567 19.78 atmosphere 995 43200 < th dose dependent rect. 1 1
606 19.79 temperature 30 4320 < th dose independent rect. 15 1
608 19.79 radiation 20 1440 > th dose independent rect. 10 2
654 19.79 atmosphere 1005 10 > th dose independent rect. 22 14
661 19.79 radiation 40 10 < th dose independent rect. 7 15
666 19.79 atmosphere 995 270 > th dose dependent sin 8 NA
668 19.79 temperature 20 720 > th dose dependent rect. 5 6
686 19.80 humidity 90 720 > th dose independent rect. 21 4
715 19.80 wind 7 90 < th dose independent rect. 5 17
725 19.80 humidity 50 1440 > th dose dependent rect. 10 16
747 19.81 humidity 70 1440 > th dose independent rect. 10 10
765 19.81 humidity 70 1440 > th dose independent rect. 10 21
767 19.81 atmosphere 995 30 > th dose dependent sin 6 NA
775 19.81 humidity 80 1440 < th dose dependent rect. 10 12
806 19.82 radiation 20 1440 > th dose independent rect. 10 7
843 19.82 humidity 90 1440 < th dose dependent no NA NA
844 19.82 wind 1 4320 < th dose dependent rect. 6 1
853 19.82 radiation 20 1440 < th dose dependent rect. 10 7
857 19.82 radiation 30 1440 < th dose dependent rect. 13 9
881 19.82 humidity 90 1440 < th dose dependent rect. 2 23
888 19.83 radiation 20 1440 > th dose independent sin 15 NA
897 19.83 wind 1 4320 > th dose independent rect. 5 6
898 19.83 wind 3 14400 > th dose independent rect. 8 6
900 19.83 atmosphere 1005 10 < th dose independent rect. 4 6
942 19.83 humidity 90 1440 < th dose dependent rect. 11 6
977 19.83 humidity 90 1440 < th dose dependent rect. 4 21
989 19.83 humidity 90 1440 < th dose dependent rect. 13 23