Os01g0653200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycosyl transferase, group 1 domain containing protein.
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Os01g0653200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glycosyl transferase, group 1 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 49.82 | 0.332 | 2.89 | -0.0152 | 0.024 | -0.228 | -0.033 | 1.42 | -0.0189 | 20.1 | 1.1 | 16 | -- | -- |
| 51.41 | 0.337 | 2.87 | 0.0415 | 0.00761 | -0.108 | -0.187 | -- | -0.00389 | 2.53 | 1.1 | 16 | -- | -- |
| 49.82 | 0.329 | 2.89 | -0.0143 | 0.0248 | -0.23 | -- | 1.42 | -0.0187 | 19.6 | 1.1 | 16 | -- | -- |
| 51.53 | 0.337 | 2.87 | 0.0466 | 0.0123 | -0.106 | -- | -- | -0.0027 | 22.7 | 1 | 16 | -- | -- |
| 49.86 | 0.329 | 2.89 | -0.0129 | -- | -0.22 | -- | 1.41 | -0.0191 | -- | 1.086 | 16 | -- | -- |
| 51.79 | 0.337 | 2.87 | 0.0541 | 0.0363 | -- | -0.168 | -- | -0.00549 | 2.71 | -- | -- | -- | -- |
| 51.89 | 0.337 | 2.87 | 0.0582 | 0.036 | -- | -- | -- | -0.00452 | 2.86 | -- | -- | -- | -- |
| 51.54 | 0.336 | 2.87 | 0.0467 | -- | -0.108 | -- | -- | -0.00261 | -- | 1 | 16 | -- | -- |
| 51.59 | 0.336 | 2.87 | -- | 0.0125 | -0.111 | -- | -- | -0.00776 | 22.6 | 1.1 | 16 | -- | -- |
| 51.96 | 0.337 | 2.87 | 0.0598 | -- | -- | -- | -- | -0.00359 | -- | -- | -- | -- | -- |
| 51.98 | 0.337 | 2.87 | -- | 0.0371 | -- | -- | -- | -0.011 | 2.87 | -- | -- | -- | -- |
| 51.6 | 0.336 | 2.87 | -- | -- | -0.112 | -- | -- | -0.00771 | -- | 1.019 | 16 | -- | -- |
| 52.06 | 0.337 | 2.87 | -- | -- | -- | -- | -- | -0.0102 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 41.67 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 3 | 41.71 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 5 | 41.73 | temperature | 20.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 6 | 41.74 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 9 | 41.76 | wind | 5.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 10 | 41.78 | wind | 3.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 18 | 41.84 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 20 | 41.84 | temperature | 30.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 21 | 41.84 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 26 | 41.84 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 28 | 41.84 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 33 | 41.84 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 34 | 41.84 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 35 | 41.84 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 40 | 41.84 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 41 | 41.85 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 48 | 42.15 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 50 | 42.33 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 53 | 42.64 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 99 | 44.01 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 101 | 44.32 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 110 | 44.36 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 111 | 44.36 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 114 | 44.36 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 118 | 44.36 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 127 | 44.36 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 128 | 44.36 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 148 | 44.36 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 164 | 45.21 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 169 | 45.61 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 23 |
| 170 | 45.61 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 203 | 47.98 | humidity | 50.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 204 | 48.08 | temperature | 30.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 257 | 48.77 | wind | 1.0 | 30 | < th | dose independent | rect. | 24 | 3 |
| 260 | 48.79 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 23 | 4 |
| 298 | 49.20 | temperature | 25.0 | 10 | > th | dose independent | rect. | 23 | 1 |
| 329 | 49.43 | humidity | 90.0 | 90 | < th | dose independent | rect. | 2 | 1 |
| 330 | 49.43 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 334 | 49.47 | wind | 1.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 439 | 49.81 | wind | 1.0 | 10 | > th | dose independent | sin | 7 | NA |
| 481 | 49.94 | wind | 1.0 | 10 | < th | dose independent | rect. | 2 | 10 |
| 514 | 50.02 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 4 | 1 |
| 529 | 50.05 | wind | 3.0 | 30 | < th | dose dependent | rect. | 22 | 5 |
| 589 | 50.14 | humidity | 50.0 | 4320 | > th | dose dependent | rect. | 4 | 1 |
| 606 | 50.16 | wind | 1.0 | 10 | > th | dose independent | no | NA | NA |
| 639 | 50.18 | radiation | 10.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 650 | 50.18 | radiation | 20.0 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 657 | 50.19 | wind | 3.0 | 30 | < th | dose dependent | rect. | 17 | 10 |
| 696 | 50.25 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 725 | 50.29 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 4 | 2 |
| 729 | 50.29 | wind | 1.0 | 10 | > th | dose independent | rect. | 21 | 23 |
| 738 | 50.31 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 1 | 1 |
| 739 | 50.31 | humidity | 90.0 | 10 | < th | dose independent | rect. | 23 | 1 |
| 885 | 50.43 | wind | 9.0 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 891 | 50.44 | atmosphere | 995.0 | 4320 | < th | dose dependent | rect. | 14 | 1 |
| 918 | 50.46 | atmosphere | 995.0 | 4320 | < th | dose independent | rect. | 14 | 1 |
| 949 | 50.47 | temperature | 25.0 | 270 | > th | dose independent | sin | 11 | NA |
| 986 | 50.47 | wind | 1.0 | 10 | > th | dose independent | rect. | 15 | 23 |
| 996 | 50.48 | wind | 3.0 | 4320 | < th | dose independent | rect. | 3 | 2 |
| 999 | 50.48 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 12 | 4 |