Os01g0653100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF231, plant domain containing protein.
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Os01g0653100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF231, plant domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 495.83 | 1.05 | 3.48 | -0.593 | 0.0467 | 4.7 | -0.941 | -18.8 | -0.244 | 21 | 998.8 | 1468 | -- | -- |
| 499.57 | 1.05 | 3.4 | -0.17 | 0.00703 | 1.94 | 0.967 | -- | -0.265 | 8.07 | 997.3 | 2144 | -- | -- |
| 498.5 | 1.04 | 3.49 | -0.638 | 0.0508 | 5.39 | -- | -22.7 | -0.256 | 23 | 998.8 | 1380 | -- | -- |
| 499.22 | 1.04 | 3.4 | -0.0854 | 0.0358 | 1.49 | -- | -- | -0.251 | 19.7 | 996.4 | 2018 | -- | -- |
| 498.48 | 1.04 | 3.48 | -0.582 | -- | 5.92 | -- | -25.1 | -0.241 | -- | 998.3 | 1415 | -- | -- |
| 515.97 | 1.06 | 3.41 | -0.0992 | 0.0163 | -- | -0.886 | -- | -0.294 | 20.3 | -- | -- | -- | -- |
| 518.39 | 1.07 | 3.41 | -0.0735 | 0.0219 | -- | -- | -- | -0.295 | 23.1 | -- | -- | -- | -- |
| 499.29 | 1.04 | 3.4 | -0.0909 | -- | 1.47 | -- | -- | -0.251 | -- | 996.3 | 2014 | -- | -- |
| 499.42 | 1.04 | 3.4 | -- | 0.0428 | 1.45 | -- | -- | -0.246 | 20.5 | 996.4 | 2031 | -- | -- |
| 518.42 | 1.06 | 3.41 | -0.073 | -- | -- | -- | -- | -0.294 | -- | -- | -- | -- | -- |
| 518.53 | 1.07 | 3.41 | -- | 0.0213 | -- | -- | -- | -0.286 | 22.9 | -- | -- | -- | -- |
| 499.5 | 1.04 | 3.4 | -- | -- | 1.45 | -- | -- | -0.242 | -- | 996.3 | 2019 | -- | -- |
| 518.56 | 1.06 | 3.41 | -- | -- | -- | -- | -- | -0.286 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 490.05 | wind | 1 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 2 | 491.41 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 12 | 4 |
| 3 | 492.23 | wind | 5 | 10 | > th | dose dependent | rect. | 9 | 1 |
| 4 | 492.24 | wind | 5 | 30 | > th | dose dependent | rect. | 7 | 4 |
| 15 | 492.79 | humidity | 60 | 10 | > th | dose independent | rect. | 4 | 12 |
| 16 | 492.91 | wind | 5 | 10 | > th | dose independent | rect. | 9 | 2 |
| 23 | 493.24 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 23 | 17 |
| 34 | 493.83 | wind | 5 | 30 | > th | dose independent | rect. | 7 | 4 |
| 36 | 493.91 | humidity | 90 | 14400 | > th | dose dependent | rect. | 22 | 1 |
| 39 | 493.93 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 12 | 18 |
| 55 | 494.29 | atmosphere | 1000 | 1440 | < th | dose dependent | rect. | 19 | 7 |
| 56 | 494.30 | temperature | 20 | 1440 | < th | dose independent | rect. | 6 | 1 |
| 63 | 494.52 | temperature | 20 | 90 | < th | dose independent | rect. | 20 | 8 |
| 64 | 494.54 | temperature | 20 | 30 | > th | dose dependent | rect. | 24 | 3 |
| 67 | 494.59 | atmosphere | 1000 | 1440 | < th | dose dependent | rect. | 20 | 18 |
| 75 | 494.77 | wind | 1 | 4320 | < th | dose dependent | rect. | 16 | 5 |
| 79 | 494.81 | wind | 7 | 10 | > th | dose independent | rect. | 19 | 15 |
| 85 | 494.90 | atmosphere | 1000 | 1440 | < th | dose independent | rect. | 20 | 3 |
| 95 | 495.01 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 12 | 14 |
| 96 | 495.02 | humidity | 90 | 14400 | > th | dose dependent | rect. | 6 | 2 |
| 103 | 495.18 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 24 | 2 |
| 112 | 495.36 | temperature | 20 | 1440 | > th | dose independent | rect. | 6 | 2 |
| 114 | 495.42 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 4 | 12 |
| 125 | 495.60 | atmosphere | 1000 | 1440 | < th | dose dependent | sin | 12 | NA |
| 129 | 495.65 | wind | 1 | 14400 | < th | dose independent | rect. | 2 | 1 |
| 131 | 495.66 | humidity | 90 | 14400 | > th | dose dependent | rect. | 18 | 7 |
| 132 | 495.68 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 24 | 1 |
| 139 | 495.74 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 24 | 1 |
| 145 | 495.77 | atmosphere | 1000 | 1440 | < th | dose dependent | rect. | 17 | 15 |
| 150 | 495.81 | atmosphere | 1000 | 1440 | < th | dose dependent | sin | 6 | NA |
| 155 | 495.84 | humidity | 90 | 14400 | > th | dose dependent | rect. | 15 | 10 |
| 172 | 495.97 | radiation | 1 | 4320 | > th | dose independent | rect. | 4 | 4 |
| 185 | 495.99 | radiation | 1 | 4320 | < th | dose independent | rect. | 23 | 9 |
| 189 | 496.01 | radiation | 1 | 4320 | < th | dose independent | rect. | 4 | 4 |
| 192 | 496.02 | radiation | 1 | 4320 | < th | dose independent | rect. | 21 | 11 |
| 197 | 496.04 | radiation | 1 | 4320 | < th | dose independent | rect. | 19 | 13 |
| 243 | 496.21 | atmosphere | 1000 | 1440 | < th | dose dependent | rect. | 5 | 8 |
| 251 | 496.24 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 21 | 19 |
| 264 | 496.32 | atmosphere | 1000 | 1440 | > th | dose independent | rect. | 20 | 4 |
| 276 | 496.41 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 12 | 8 |
| 280 | 496.43 | wind | 7 | 10 | > th | dose dependent | rect. | 20 | 14 |
| 292 | 496.51 | humidity | 90 | 14400 | > th | dose dependent | rect. | 4 | 21 |
| 342 | 496.67 | wind | 1 | 4320 | < th | dose independent | rect. | 16 | 6 |
| 346 | 496.69 | temperature | 20 | 10 | > th | dose independent | rect. | 23 | 12 |
| 371 | 496.78 | atmosphere | 1000 | 1440 | < th | dose dependent | rect. | 4 | 22 |
| 402 | 496.86 | humidity | 90 | 14400 | > th | dose dependent | sin | 16 | NA |
| 435 | 496.92 | humidity | 60 | 10 | > th | dose independent | sin | 4 | NA |
| 437 | 496.92 | atmosphere | 1000 | 1440 | < th | dose dependent | no | NA | NA |
| 449 | 496.95 | atmosphere | 1000 | 1440 | < th | dose dependent | rect. | 10 | 23 |
| 462 | 496.99 | temperature | 20 | 10 | > th | dose independent | rect. | 21 | 14 |
| 485 | 497.05 | atmosphere | 1000 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 509 | 497.09 | atmosphere | 1000 | 1440 | < th | dose dependent | rect. | 1 | 23 |
| 518 | 497.12 | humidity | 60 | 10 | > th | dose independent | rect. | 4 | 10 |
| 543 | 497.15 | atmosphere | 1000 | 1440 | < th | dose dependent | rect. | 23 | 2 |
| 574 | 497.22 | atmosphere | 1000 | 1440 | < th | dose independent | rect. | 19 | 7 |
| 581 | 497.23 | wind | 5 | 1440 | < th | dose independent | rect. | 14 | 1 |
| 586 | 497.24 | atmosphere | 1000 | 1440 | < th | dose dependent | rect. | 22 | 4 |
| 629 | 497.32 | wind | 5 | 1440 | > th | dose independent | rect. | 14 | 1 |
| 638 | 497.37 | humidity | 90 | 14400 | > th | dose dependent | rect. | 12 | 22 |
| 639 | 497.38 | temperature | 30 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 654 | 497.40 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 1 |
| 667 | 497.42 | atmosphere | 1000 | 1440 | < th | dose independent | rect. | 19 | 18 |
| 704 | 497.47 | temperature | 20 | 10 | > th | dose independent | rect. | 15 | 20 |
| 727 | 497.52 | temperature | 20 | 90 | < th | dose independent | rect. | 17 | 11 |
| 736 | 497.54 | humidity | 90 | 14400 | > th | dose dependent | no | NA | NA |
| 740 | 497.55 | humidity | 90 | 14400 | > th | dose independent | rect. | 18 | 6 |
| 759 | 497.56 | humidity | 90 | 14400 | > th | dose dependent | rect. | 9 | 23 |
| 770 | 497.59 | humidity | 90 | 14400 | > th | dose dependent | rect. | 20 | 23 |
| 790 | 497.63 | humidity | 90 | 14400 | > th | dose dependent | rect. | 18 | 23 |
| 844 | 497.74 | humidity | 90 | 14400 | > th | dose independent | rect. | 21 | 2 |
| 846 | 497.75 | atmosphere | 1000 | 1440 | < th | dose independent | rect. | 6 | 7 |
| 869 | 497.81 | atmosphere | 995 | 720 | < th | dose independent | rect. | 14 | 1 |
| 968 | 497.84 | humidity | 90 | 14400 | > th | dose independent | rect. | 12 | 20 |
| 978 | 497.86 | humidity | 90 | 14400 | > th | dose independent | rect. | 12 | 22 |
| 989 | 497.88 | atmosphere | 1000 | 1440 | > th | dose independent | rect. | 19 | 17 |