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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os01g0652100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function DUF231, plant domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3 (0.0377) R2 : 0.00061
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0419 (0.0794) R2dN8 : 0.000788 R2N8 : 0.00061
σ : 0.71
deviance : 231.26
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
217.69 0.693 3 -0.0655 0.385 0.58 0.253 -1.14 -0.103 3.79 1001 721 -- --
217.89 0.687 3.01 -0.115 0.391 0.399 0.295 -- -0.103 3.87 1001 736 -- --
217.85 0.687 3 -0.0747 0.384 0.568 -- -1.07 -0.105 3.62 1001 720 -- --
218.06 0.688 3.01 -0.139 0.38 0.391 -- -- -0.105 3.64 1001 700 -- --
226 0.7 3 -0.0741 -- 0.525 -- -0.827 -0.0958 -- 1001 675 -- --
222.07 0.699 3 -0.188 0.383 -- 0.299 -- -0.07 3.97 -- -- -- --
222.3 0.698 3 -0.192 0.384 -- -- -- -0.0716 3.75 -- -- -- --
226.07 0.7 3.01 -0.114 -- 0.393 -- -- -0.095 -- 1001 670 -- --
218.56 0.689 3.01 -- 0.377 0.408 -- -- -0.0905 3.64 1001 700 -- --
230.44 0.709 3 -0.176 -- -- -- -- -0.0614 -- -- -- -- --
223.27 0.699 3 -- 0.38 -- -- -- -0.0503 3.75 -- -- -- --
226.47 0.701 3.01 -- -- 0.404 -- -- -0.0826 -- 1001 670 -- --
231.26 0.71 3 -- -- -- -- -- -0.0419 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 204.37 wind 3.0 10 > th dose dependent rect. 2 2
3 205.64 wind 3.0 10 > th dose independent rect. 2 2
8 211.95 humidity 80.0 270 < th dose independent rect. 24 1
9 211.95 humidity 80.0 10 < th dose independent rect. 24 5
11 211.95 humidity 80.0 270 < th dose dependent rect. 24 1
12 212.04 atmosphere 1000.0 90 > th dose independent rect. 1 8
13 212.06 atmosphere 1000.0 270 > th dose independent rect. 23 9
16 212.39 atmosphere 1000.0 10 > th dose independent rect. 2 7
19 212.50 wind 5.0 90 > th dose dependent rect. 22 11
23 212.72 temperature 15.0 30 > th dose independent rect. 22 4
24 212.74 wind 7.0 90 > th dose independent rect. 22 11
26 212.78 atmosphere 995.0 10 > th dose dependent rect. 2 7
33 212.90 wind 3.0 10 > th dose independent rect. 24 5
34 212.92 wind 5.0 90 > th dose dependent rect. 22 6
35 212.97 humidity 80.0 10 < th dose dependent rect. 24 5
37 212.98 wind 5.0 90 > th dose dependent rect. 22 4
41 213.07 humidity 80.0 90 < th dose independent rect. 22 6
48 213.19 wind 5.0 30 < th dose dependent rect. 22 4
49 213.21 wind 3.0 10 < th dose independent rect. 22 4
52 213.23 atmosphere 1000.0 30 > th dose independent rect. 2 20
53 213.26 atmosphere 1000.0 270 > th dose independent rect. 12 18
56 213.28 wind 7.0 90 > th dose independent rect. 22 4
57 213.28 atmosphere 995.0 270 > th dose dependent rect. 24 6
70 213.39 temperature 15.0 30 > th dose independent rect. 9 17
79 213.43 temperature 15.0 10 > th dose independent rect. 22 16
99 213.68 atmosphere 1000.0 10 > th dose dependent rect. 2 4
102 213.70 atmosphere 1000.0 90 > th dose independent rect. 14 19
109 213.75 wind 1.0 10 > th dose independent rect. 22 16
116 213.82 atmosphere 1010.0 90 < th dose dependent rect. 15 7
119 213.90 wind 9.0 1440 < th dose independent rect. 23 4
125 213.94 atmosphere 1000.0 270 > th dose dependent rect. 2 1
127 213.95 temperature 25.0 30 < th dose independent rect. 2 6
129 213.95 atmosphere 1000.0 10 > th dose independent rect. 15 18
148 214.04 humidity 80.0 90 < th dose dependent rect. 22 1
154 214.09 atmosphere 1000.0 10 > th dose independent rect. 15 15
157 214.12 temperature 15.0 270 > th dose independent rect. 20 16
159 214.13 humidity 80.0 90 < th dose independent rect. 22 2
162 214.14 wind 5.0 270 < th dose dependent rect. 22 1
163 214.14 radiation 10.0 14400 < th dose dependent rect. 23 4
164 214.17 humidity 80.0 90 < th dose independent rect. 2 2
168 214.18 humidity 80.0 90 < th dose dependent rect. 2 2
176 214.19 atmosphere 1010.0 10 < th dose dependent rect. 16 6
178 214.20 humidity 90.0 10 < th dose dependent rect. 3 1
194 214.25 wind 3.0 90 > th dose dependent rect. 1 6
204 214.28 temperature 25.0 30 < th dose independent rect. 2 4
241 214.39 humidity 80.0 90 < th dose dependent rect. 22 6
245 214.41 wind 1.0 270 > th dose independent rect. 24 7
247 214.41 radiation 40.0 10 < th dose dependent rect. 2 8
251 214.43 atmosphere 1000.0 270 > th dose independent rect. 1 2
256 214.44 temperature 25.0 270 > th dose independent rect. 14 13
258 214.45 temperature 15.0 270 > th dose independent rect. 22 1
267 214.48 radiation 40.0 10 < th dose independent rect. 2 8
272 214.49 temperature 25.0 270 > th dose independent rect. 14 18
276 214.50 temperature 30.0 30 < th dose dependent rect. 2 7
279 214.52 wind 5.0 90 < th dose independent rect. 19 16
280 214.52 humidity 90.0 10 < th dose independent rect. 21 18
284 214.53 atmosphere 1000.0 270 > th dose independent rect. 24 19
289 214.54 precipitation 0.1 10 < th dose independent rect. 22 16
291 214.54 precipitation 0.1 10 < th dose dependent rect. 22 16
308 214.59 atmosphere 1015.0 10 < th dose dependent rect. 14 8
313 214.61 temperature 30.0 270 < th dose dependent rect. 24 6
314 214.61 temperature 10.0 90 > th dose dependent rect. 14 8
334 214.65 atmosphere 1000.0 270 > th dose independent rect. 24 17
365 214.74 temperature 25.0 270 > th dose independent sin 13 NA
375 214.75 humidity 80.0 30 > th dose independent rect. 22 4
384 214.77 wind 5.0 90 < th dose independent rect. 21 14
388 214.78 wind 3.0 270 < th dose independent rect. 22 1
418 214.83 wind 9.0 30 < th dose dependent rect. 17 9
420 214.84 wind 3.0 90 < th dose independent rect. 18 4
424 214.84 temperature 10.0 10 > th dose dependent rect. 15 7
432 214.86 temperature 15.0 270 > th dose independent rect. 19 5
444 214.89 humidity 80.0 720 < th dose independent rect. 21 2
452 214.90 wind 3.0 30 < th dose independent rect. 20 6
462 214.91 wind 7.0 1440 < th dose independent rect. 22 2
465 214.91 temperature 10.0 1440 > th dose independent rect. 3 7
468 214.91 atmosphere 995.0 1440 > th dose independent rect. 3 7
469 214.91 atmosphere 1000.0 90 > th dose independent rect. 14 8
473 214.91 temperature 10.0 1440 > th dose independent rect. 10 17
484 214.93 wind 7.0 10 < th dose independent rect. 2 7
486 214.93 temperature 10.0 30 > th dose independent rect. 2 7
489 214.93 humidity 50.0 30 > th dose independent rect. 2 7
492 214.93 atmosphere 1015.0 30 < th dose independent rect. 2 7
498 214.94 atmosphere 1000.0 10 > th dose independent rect. 14 8
500 214.94 wind 9.0 10 < th dose independent rect. 9 17
503 214.95 atmosphere 1010.0 30 < th dose independent rect. 22 4
507 214.95 wind 9.0 90 < th dose dependent rect. 22 15
510 214.96 wind 1.0 270 > th dose independent rect. 13 15
532 214.98 temperature 10.0 30 > th dose dependent rect. 22 4
544 215.00 humidity 50.0 30 > th dose dependent rect. 22 4
545 215.00 atmosphere 1015.0 30 < th dose dependent rect. 22 4
557 215.02 wind 5.0 1440 > th dose dependent rect. 22 1
564 215.03 humidity 80.0 30 > th dose independent rect. 18 10
581 215.06 temperature 10.0 1440 > th dose independent rect. 23 4
584 215.06 temperature 30.0 1440 < th dose independent rect. 23 4
588 215.06 humidity 50.0 1440 > th dose independent rect. 23 4
598 215.06 atmosphere 995.0 1440 > th dose independent rect. 23 4
599 215.06 radiation 1.0 1440 < th dose independent rect. 23 4
620 215.06 temperature 25.0 270 < th dose independent rect. 21 9
623 215.06 temperature 10.0 1440 > th dose independent rect. 3 20
627 215.06 radiation 1.0 1440 < th dose dependent rect. 23 4
641 215.08 temperature 25.0 10 < th dose independent rect. 24 6
672 215.10 temperature 30.0 30 < th dose independent rect. 22 4
673 215.10 humidity 50.0 30 > th dose independent rect. 22 4
676 215.10 atmosphere 995.0 30 > th dose independent rect. 22 4
677 215.10 radiation 1.0 30 < th dose independent rect. 22 4
685 215.10 temperature 10.0 30 > th dose independent rect. 2 20
687 215.10 atmosphere 1015.0 30 < th dose independent rect. 2 20
689 215.10 radiation 1.0 30 < th dose dependent rect. 22 4
696 215.11 wind 9.0 30 < th dose independent rect. 22 4
706 215.12 wind 9.0 30 < th dose independent rect. 2 20
712 215.12 radiation 10.0 10 < th dose dependent rect. 2 20
714 215.13 precipitation 0.1 30 < th dose independent rect. 22 4
720 215.13 precipitation 0.1 30 < th dose dependent rect. 22 4
723 215.13 wind 9.0 270 < th dose dependent rect. 20 15
733 215.15 temperature 10.0 270 > th dose dependent rect. 12 8
747 215.17 temperature 30.0 270 < th dose dependent rect. 1 2
783 215.19 humidity 50.0 10 > th dose dependent rect. 2 8
793 215.21 radiation 20.0 30 < th dose independent rect. 14 8
797 215.22 atmosphere 1005.0 10 < th dose independent rect. 3 1
812 215.23 precipitation 0.1 10 < th dose independent rect. 9 17
814 215.23 precipitation 0.1 10 < th dose dependent rect. 9 17
818 215.25 temperature 20.0 10 > th dose independent rect. 14 8
865 215.32 radiation 40.0 90 < th dose independent rect. 14 8
892 215.34 wind 9.0 14400 > th dose dependent rect. 12 1
930 215.38 humidity 50.0 10 > th dose independent rect. 9 17
944 215.39 radiation 20.0 14400 < th dose dependent rect. 19 8
948 215.40 temperature 15.0 270 > th dose independent rect. 17 7
949 215.40 wind 3.0 30 < th dose independent rect. 20 8
957 215.40 temperature 10.0 90 > th dose dependent rect. 22 15
969 215.42 wind 1.0 270 > th dose independent rect. 24 19
997 215.45 wind 3.0 10 < th dose independent rect. 20 2
999 215.45 precipitation 0.1 90 < th dose independent rect. 14 8