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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os01g0650900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Lipolytic enzyme, G-D-S-L family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.22 (0.035) R2 : 0.000153
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0194 (0.0737) R2dN8 : 0.000197 R2N8 : 0.000153
σ : 0.66
deviance : 199.7
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
188.76 0.646 3.21 -0.0717 0.511 0.468 0.047 -0.647 -0.0956 9.53 89 653 -- --
189.63 0.641 3.22 -0.0164 0.505 0.483 0.34 -- -0.0938 9.49 89 656 -- --
188.75 0.64 3.21 -0.0721 0.511 0.468 -- -0.671 -0.0964 9.5 88.93 647 -- --
190.07 0.642 3.22 -0.00754 0.507 0.462 -- -- -0.0892 9.48 88.91 647 -- --
196.33 0.653 3.22 -0.0981 -- 0.406 -- -0.849 -0.0779 -- 88.37 1431 -- --
194.64 0.654 3.21 -0.0717 0.275 -- 0.296 -- -0.0263 10.5 -- -- -- --
195 0.654 3.21 -0.0595 0.273 -- -- -- -0.0253 10.6 -- -- -- --
197.43 0.654 3.23 -0.0141 -- 0.366 -- -- -0.0677 -- 88.49 1438 -- --
190.07 0.642 3.22 -- 0.508 0.463 -- -- -0.0878 9.47 88.93 647 -- --
199.59 0.66 3.22 -0.0646 -- -- -- -- -0.0266 -- -- -- -- --
195.09 0.653 3.21 -- 0.274 -- -- -- -0.0187 10.6 -- -- -- --
197.44 0.654 3.23 -- -- 0.369 -- -- -0.0665 -- 88.49 1438 -- --
199.7 0.66 3.22 -- -- -- -- -- -0.0194 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 187.12 humidity 90.0 720 < th dose independent rect. 1 5
2 187.16 atmosphere 1005.0 10 > th dose dependent rect. 1 2
4 187.17 temperature 25.0 30 > th dose independent rect. 18 17
7 187.44 humidity 80.0 30 < th dose independent rect. 23 5
9 187.51 humidity 80.0 30 < th dose independent rect. 23 3
17 187.56 atmosphere 1015.0 10 < th dose independent rect. 3 23
18 187.58 humidity 80.0 30 < th dose dependent rect. 23 5
22 187.65 humidity 80.0 30 < th dose dependent rect. 23 3
34 187.82 wind 7.0 10 < th dose independent rect. 3 23
43 188.06 temperature 30.0 30 < th dose independent rect. 3 23
45 188.08 temperature 25.0 10 > th dose dependent rect. 18 17
50 188.20 temperature 25.0 30 < th dose dependent rect. 2 1
51 188.23 humidity 90.0 720 < th dose independent sin 8 NA
78 188.67 temperature 25.0 30 > th dose independent rect. 22 13
79 188.68 humidity 90.0 720 < th dose independent rect. 22 19
83 188.75 temperature 25.0 30 < th dose dependent rect. 9 3
88 188.78 atmosphere 1005.0 30 > th dose independent rect. 1 2
93 188.81 humidity 90.0 720 < th dose independent rect. 22 22
96 188.83 humidity 70.0 30 > th dose independent rect. 3 22
97 188.83 temperature 10.0 30 > th dose dependent rect. 3 23
100 188.86 temperature 25.0 4320 > th dose independent rect. 6 1
110 188.90 temperature 30.0 10 > th dose independent rect. 11 1
111 188.90 temperature 30.0 90 > th dose independent rect. 11 1
114 188.91 humidity 80.0 30 < th dose independent rect. 1 3
120 188.92 temperature 25.0 4320 < th dose independent rect. 5 2
126 188.93 humidity 80.0 30 < th dose dependent rect. 1 3
135 188.96 humidity 50.0 30 > th dose dependent rect. 3 22
138 188.98 humidity 80.0 30 < th dose independent rect. 1 1
146 188.98 humidity 80.0 30 < th dose dependent rect. 1 1
153 188.99 temperature 20.0 30 > th dose dependent rect. 3 8
180 189.09 temperature 25.0 90 > th dose independent rect. 3 8
183 189.10 temperature 30.0 10 > th dose dependent rect. 11 1
194 189.13 humidity 60.0 30 > th dose independent rect. 3 8
198 189.14 radiation 1.0 14400 < th dose dependent rect. 1 3
203 189.16 wind 3.0 10 < th dose independent rect. 1 2
213 189.19 humidity 90.0 720 < th dose independent rect. 14 22
217 189.21 humidity 90.0 720 < th dose independent rect. 14 17
219 189.22 temperature 25.0 30 > th dose independent rect. 15 20
221 189.23 humidity 60.0 30 > th dose independent rect. 3 11
228 189.23 wind 9.0 30 < th dose dependent rect. 3 23
231 189.24 humidity 90.0 720 < th dose independent rect. 10 22
249 189.28 humidity 90.0 720 < th dose independent rect. 5 1
273 189.29 temperature 25.0 10 > th dose dependent sin 10 NA
279 189.30 temperature 30.0 10 > th dose dependent rect. 17 19
303 189.36 temperature 25.0 10 < th dose independent rect. 2 1
324 189.37 humidity 80.0 720 > th dose dependent rect. 22 8
331 189.39 wind 1.0 30 > th dose independent rect. 2 1
333 189.39 temperature 10.0 10 > th dose independent rect. 2 1
336 189.39 humidity 50.0 10 > th dose independent rect. 2 1
340 189.39 atmosphere 1010.0 10 < th dose independent rect. 2 1
342 189.39 radiation 1.0 10 < th dose independent rect. 2 1
347 189.39 precipitation 0.1 10 < th dose independent rect. 2 1
354 189.39 temperature 10.0 10 > th dose independent rect. 3 23
356 189.39 radiation 1.0 10 < th dose dependent rect. 2 1
361 189.39 precipitation 0.1 10 < th dose dependent rect. 2 1
405 189.42 humidity 90.0 720 < th dose independent no NA NA
424 189.45 atmosphere 1015.0 10 < th dose dependent rect. 2 1
433 189.46 temperature 20.0 270 > th dose dependent rect. 3 6
441 189.48 wind 9.0 10 < th dose dependent rect. 2 1
442 189.48 atmosphere 1000.0 1440 < th dose dependent rect. 10 1
445 189.49 humidity 90.0 4320 < th dose independent rect. 3 1
446 189.49 humidity 90.0 720 < th dose independent rect. 18 14
455 189.50 humidity 90.0 720 < th dose dependent sin 9 NA
469 189.52 humidity 50.0 10 > th dose dependent rect. 2 1
508 189.55 temperature 25.0 10 < th dose independent rect. 22 15
521 189.56 humidity 80.0 270 > th dose independent rect. 3 19
530 189.57 temperature 10.0 10 > th dose dependent rect. 2 1
537 189.58 humidity 90.0 30 > th dose independent rect. 2 1
538 189.58 atmosphere 995.0 14400 > th dose independent rect. 12 1
554 189.61 temperature 25.0 270 > th dose independent rect. 3 5
565 189.62 precipitation 0.1 10 < th dose independent rect. 3 23
567 189.62 radiation 1.0 14400 < th dose dependent rect. 3 1
569 189.62 precipitation 0.1 10 < th dose dependent rect. 3 23
613 189.66 temperature 30.0 30 < th dose independent rect. 3 11
618 189.67 humidity 90.0 4320 < th dose independent rect. 3 3
626 189.68 humidity 70.0 270 > th dose independent rect. 3 10
629 189.69 atmosphere 995.0 10 > th dose independent rect. 3 23
637 189.71 temperature 25.0 4320 > th dose dependent rect. 6 1
638 189.71 radiation 40.0 90 > th dose dependent rect. 8 1
660 189.72 humidity 90.0 720 < th dose independent rect. 5 23
675 189.75 temperature 25.0 4320 > th dose dependent rect. 4 3
700 189.78 radiation 40.0 30 < th dose independent rect. 3 8
714 189.79 humidity 90.0 720 < th dose independent rect. 3 23
717 189.79 humidity 90.0 720 < th dose dependent rect. 22 9
718 189.80 atmosphere 995.0 14400 > th dose independent rect. 10 3
737 189.82 humidity 80.0 720 > th dose dependent rect. 22 19
747 189.83 humidity 90.0 720 < th dose dependent rect. 21 13
754 189.85 humidity 60.0 1440 > th dose independent rect. 4 6
758 189.85 humidity 90.0 720 < th dose dependent rect. 1 1
762 189.85 wind 5.0 90 > th dose dependent rect. 16 23
766 189.86 humidity 60.0 270 > th dose dependent rect. 3 19
767 189.87 temperature 25.0 30 > th dose independent sin 8 NA
784 189.89 humidity 60.0 1440 > th dose independent rect. 7 3
785 189.89 temperature 25.0 10 < th dose independent rect. 17 20
798 189.90 temperature 25.0 10 < th dose independent rect. 20 17
803 189.91 humidity 60.0 1440 < th dose independent rect. 9 1
804 189.91 atmosphere 1000.0 1440 < th dose independent rect. 12 1
811 189.92 humidity 60.0 10 < th dose independent sin 9 NA
814 189.92 humidity 60.0 1440 > th dose independent rect. 20 14
825 189.92 humidity 90.0 270 < th dose dependent rect. 21 18
871 189.96 humidity 80.0 720 > th dose dependent sin 10 NA
880 189.97 humidity 90.0 720 < th dose dependent rect. 22 11
884 189.98 wind 1.0 10 < th dose independent rect. 6 4
895 189.99 wind 1.0 10 > th dose independent rect. 3 8
898 189.99 wind 1.0 10 < th dose dependent rect. 6 4
910 190.00 humidity 60.0 720 < th dose dependent rect. 9 1
933 190.01 atmosphere 995.0 30 > th dose dependent rect. 14 13
936 190.02 atmosphere 1000.0 1440 > th dose independent rect. 10 1
944 190.03 humidity 60.0 270 < th dose independent rect. 8 1