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Os01g0648500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : TAFII55 protein conserved region domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.9 (0.0264) R2 : 0.198
β1 : -0.969 (0.0967) R2dD : 0.183 R2D : 0.131
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.3 (0.0564) R2dN8 : 0.0666 R2N8 : 0.0146
σ : 0.496
deviance : 112.54
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
94.3 0.456 6.8 0.189 0.423 -1.19 0.382 6.59 -0.355 17 29.72 4310 -- --
95.34 0.455 6.86 -0.707 0.404 -0.479 0.293 -- -0.0844 17 23.4 9508 -- --
94.67 0.453 6.8 0.185 0.425 -1.19 -- 6.52 -0.35 17 29.67 4305 -- --
95.59 0.455 6.87 -0.739 0.423 -0.461 -- -- -0.103 17.1 23.5 9535 -- --
104.1 0.475 6.81 0.0752 -- -1.16 -- 5.9 -0.368 -- 29.76 4296 -- --
102.16 0.474 6.91 -0.954 0.43 -- 0.415 -- -0.291 16.8 -- -- -- --
102.61 0.474 6.91 -0.953 0.433 -- -- -- -0.288 16.8 -- -- -- --
104.02 0.475 6.86 -0.767 -- -0.461 -- -- -0.128 -- 24.1 8460 -- --
100.57 0.467 6.82 -- 0.358 -0.874 -- -- 0.198 17.6 16.4 15832 -- --
112.54 0.496 6.9 -0.969 -- -- -- -- -0.3 -- -- -- -- --
126.53 0.526 6.88 -- 0.451 -- -- -- -0.182 16.7 -- -- -- --
108.21 0.484 6.81 -- -- -0.974 -- -- 0.135 -- 6.526 15691 -- --
137.3 0.547 6.88 -- -- -- -- -- -0.192 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 91.30 wind 1.0 1440 < th dose dependent rect. 4 1
2 91.86 radiation 10.0 43200 > th dose independent rect. 9 1
5 92.24 wind 1.0 43200 < th dose dependent rect. 1 1
7 92.42 wind 1.0 1440 < th dose independent rect. 4 1
9 92.50 radiation 10.0 43200 < th dose dependent rect. 9 1
11 92.70 temperature 25.0 4320 > th dose dependent rect. 8 1
14 92.84 temperature 30.0 4320 < th dose independent rect. 11 2
16 92.89 temperature 30.0 4320 > th dose independent rect. 11 2
17 92.92 wind 1.0 1440 > th dose independent rect. 4 1
19 92.95 atmosphere 1000.0 43200 < th dose dependent rect. 15 1
21 92.97 humidity 60.0 14400 > th dose independent rect. 17 1
22 92.97 atmosphere 1000.0 43200 < th dose independent rect. 4 5
29 92.99 temperature 30.0 4320 > th dose independent rect. 16 17
30 93.02 atmosphere 1000.0 43200 > th dose independent rect. 9 1
31 93.02 atmosphere 1000.0 43200 < th dose independent rect. 6 1
34 93.02 atmosphere 1000.0 43200 < th dose independent rect. 6 3
36 93.03 atmosphere 1000.0 43200 > th dose independent rect. 6 1
57 93.04 temperature 30.0 4320 < th dose independent rect. 16 17
70 93.10 humidity 80.0 43200 < th dose dependent rect. 22 1
72 93.11 radiation 20.0 1440 < th dose dependent rect. 18 11
73 93.12 temperature 30.0 4320 > th dose independent rect. 16 3
82 93.12 temperature 30.0 4320 < th dose independent rect. 16 11
91 93.14 temperature 30.0 4320 < th dose independent rect. 16 4
92 93.14 humidity 80.0 43200 > th dose independent rect. 22 5
106 93.17 wind 1.0 43200 < th dose independent rect. 1 1
107 93.17 humidity 60.0 14400 < th dose independent rect. 17 1
108 93.17 temperature 30.0 4320 < th dose independent rect. 16 6
112 93.18 humidity 80.0 43200 < th dose independent rect. 22 2
134 93.23 temperature 30.0 4320 < th dose independent rect. 16 21
143 93.27 atmosphere 995.0 43200 > th dose independent rect. 14 8
146 93.27 atmosphere 995.0 43200 < th dose dependent rect. 15 7
153 93.29 atmosphere 1000.0 43200 < th dose independent rect. 4 11
158 93.31 temperature 30.0 4320 > th dose independent rect. 16 21
165 93.32 atmosphere 1000.0 43200 > th dose independent rect. 4 11
185 93.33 wind 3.0 43200 > th dose dependent rect. 6 1
194 93.37 temperature 25.0 4320 > th dose independent rect. 7 2
195 93.37 temperature 25.0 4320 < th dose independent rect. 7 2
217 93.42 atmosphere 995.0 43200 < th dose independent rect. 14 8
221 93.43 atmosphere 1000.0 43200 < th dose independent rect. 14 1
250 93.50 humidity 60.0 14400 > th dose independent rect. 17 12
252 93.50 humidity 60.0 14400 > th dose independent rect. 17 15
254 93.51 humidity 60.0 14400 > th dose independent rect. 17 5
262 93.52 humidity 60.0 14400 > th dose independent rect. 17 9
264 93.52 atmosphere 995.0 43200 > th dose independent rect. 13 10
267 93.53 atmosphere 1000.0 43200 > th dose independent rect. 14 1
275 93.54 atmosphere 1000.0 43200 < th dose independent rect. 11 1
280 93.55 atmosphere 1000.0 43200 > th dose independent rect. 11 1
282 93.55 atmosphere 995.0 43200 < th dose independent rect. 13 10
284 93.56 wind 9.0 43200 < th dose dependent rect. 6 1
302 93.59 wind 9.0 43200 > th dose independent rect. 20 20
309 93.61 wind 9.0 43200 > th dose independent rect. 20 18
328 93.64 humidity 70.0 4320 < th dose dependent rect. 18 1
341 93.66 radiation 10.0 1440 < th dose dependent rect. 18 6
353 93.69 radiation 10.0 1440 < th dose dependent rect. 18 4
390 93.73 humidity 70.0 4320 < th dose dependent rect. 18 13
395 93.74 wind 9.0 43200 < th dose independent rect. 20 19
415 93.75 wind 9.0 43200 > th dose dependent rect. 13 19
436 93.80 wind 3.0 43200 > th dose independent rect. 6 1
448 93.81 atmosphere 1000.0 43200 < th dose dependent sin 22 NA
451 93.82 temperature 30.0 4320 < th dose independent sin 11 NA
453 93.82 temperature 30.0 4320 < th dose independent rect. 23 14
454 93.82 temperature 30.0 4320 < th dose independent rect. 21 16
471 93.84 temperature 30.0 4320 < th dose independent rect. 6 7
474 93.84 wind 9.0 43200 > th dose independent rect. 23 17
482 93.85 temperature 30.0 4320 > th dose independent sin 11 NA
518 93.88 wind 9.0 43200 > th dose independent rect. 2 14
527 93.89 wind 9.0 43200 < th dose independent rect. 23 16
534 93.89 wind 7.0 43200 > th dose dependent rect. 2 14
538 93.90 humidity 60.0 14400 < th dose independent rect. 17 15
541 93.90 wind 7.0 43200 > th dose dependent rect. 4 12
543 93.90 humidity 70.0 14400 < th dose dependent rect. 17 15
545 93.91 temperature 30.0 4320 > th dose independent rect. 8 5
562 93.91 wind 9.0 43200 > th dose independent rect. 13 21
568 93.92 wind 9.0 43200 > th dose independent rect. 4 12
592 93.93 wind 7.0 43200 > th dose dependent rect. 23 17
593 93.94 wind 9.0 43200 < th dose independent rect. 2 13
619 93.96 temperature 30.0 4320 > th dose dependent rect. 13 1
631 93.98 wind 1.0 43200 > th dose independent rect. 1 1
679 94.00 precipitation 0.1 43200 > th dose dependent rect. 3 15
683 94.01 wind 1.0 43200 < th dose dependent rect. 24 4
686 94.01 wind 7.0 43200 > th dose dependent rect. 20 20
706 94.02 wind 1.0 4320 > th dose independent rect. 10 13
753 94.06 wind 3.0 43200 < th dose independent rect. 6 1
803 94.10 wind 9.0 43200 < th dose independent rect. 13 21
840 94.15 wind 3.0 43200 > th dose independent rect. 20 11
860 94.17 wind 9.0 43200 > th dose independent rect. 8 6
870 94.17 wind 9.0 43200 > th dose independent rect. 23 22
893 94.19 atmosphere 1000.0 43200 < th dose dependent rect. 8 1
901 94.20 wind 7.0 43200 > th dose dependent sin 2 NA
922 94.22 wind 9.0 43200 > th dose independent rect. 2 19
945 94.23 temperature 30.0 4320 > th dose dependent rect. 12 21
946 94.24 atmosphere 995.0 43200 > th dose independent sin 19 NA
954 94.24 temperature 30.0 4320 > th dose dependent rect. 12 7
980 94.25 radiation 1.0 1440 < th dose dependent rect. 3 2