Os01g0647700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Epoxide hydrolase family protein.
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Os01g0647700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Epoxide hydrolase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25.64 | 0.238 | 8.42 | 0.289 | 0.524 | -10.5 | -0.23 | -25.2 | 0.203 | 0.717 | 14.99 | 4331 | -- | -- |
| 36.84 | 0.285 | 8.85 | 0.887 | 0.484 | 1.34 | 0.0513 | -- | 0.125 | 0.521 | 15.2 | 1468 | -- | -- |
| 25.86 | 0.237 | 8.42 | 0.303 | 0.525 | -10.4 | -- | -25 | 0.205 | 0.621 | 15 | 4343 | -- | -- |
| 27.26 | 0.243 | 8.84 | 1.11 | 0.535 | 1.41 | -- | -- | 0.195 | 0.452 | 15.61 | 2329 | -- | -- |
| 42.86 | 0.305 | 8.42 | 0.324 | -- | -10.5 | -- | -25.3 | 0.209 | -- | 15 | 4697 | -- | -- |
| 40.21 | 0.297 | 8.86 | 0.83 | 0.507 | -- | -0.11 | -- | 0.11 | 0.553 | -- | -- | -- | -- |
| 40.26 | 0.297 | 8.86 | 0.834 | 0.507 | -- | -- | -- | 0.111 | 0.516 | -- | -- | -- | -- |
| 42.98 | 0.305 | 8.83 | 1.14 | -- | 1.91 | -- | -- | 0.194 | -- | 15 | 1963 | -- | -- |
| 54.33 | 0.343 | 8.88 | -- | 0.529 | 0.932 | -- | -- | 0.0335 | 0.643 | 14.26 | 2872 | -- | -- |
| 56.39 | 0.351 | 8.85 | 0.852 | -- | -- | -- | -- | 0.119 | -- | -- | -- | -- | -- |
| 58.59 | 0.358 | 8.88 | -- | 0.52 | -- | -- | -- | 0.0179 | 0.596 | -- | -- | -- | -- |
| 71.61 | 0.394 | 8.87 | -- | -- | 0.972 | -- | -- | 0.0323 | -- | 14.3 | 3052 | -- | -- |
| 75.52 | 0.406 | 8.87 | -- | -- | -- | -- | -- | 0.0248 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 23.65 | radiation | 20 | 4320 | < th | dose independent | rect. | 21 | 9 |
| 3 | 24.41 | temperature | 15 | 4320 | > th | dose independent | rect. | 18 | 3 |
| 4 | 24.44 | temperature | 15 | 4320 | > th | dose independent | rect. | 19 | 1 |
| 12 | 24.78 | temperature | 15 | 4320 | > th | dose independent | rect. | 7 | 5 |
| 14 | 24.85 | temperature | 15 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 17 | 24.93 | temperature | 10 | 43200 | > th | dose independent | rect. | 17 | 4 |
| 21 | 24.99 | humidity | 50 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 22 | 25.00 | temperature | 10 | 43200 | > th | dose independent | rect. | 8 | 13 |
| 39 | 25.17 | temperature | 10 | 43200 | > th | dose independent | rect. | 7 | 5 |
| 55 | 25.30 | radiation | 20 | 4320 | < th | dose independent | rect. | 2 | 4 |
| 61 | 25.34 | humidity | 60 | 43200 | < th | dose dependent | rect. | 23 | 2 |
| 62 | 25.35 | humidity | 60 | 43200 | < th | dose independent | rect. | 23 | 2 |
| 64 | 25.36 | temperature | 10 | 43200 | < th | dose independent | rect. | 8 | 14 |
| 67 | 25.37 | temperature | 15 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 71 | 25.37 | humidity | 60 | 43200 | < th | dose independent | rect. | 23 | 8 |
| 86 | 25.39 | temperature | 10 | 43200 | < th | dose independent | rect. | 20 | 2 |
| 92 | 25.40 | humidity | 70 | 43200 | < th | dose independent | rect. | 2 | 1 |
| 106 | 25.40 | humidity | 70 | 43200 | < th | dose dependent | rect. | 2 | 1 |
| 107 | 25.41 | wind | 9 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 108 | 25.41 | temperature | 15 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 164 | 25.41 | wind | 9 | 14400 | > th | dose dependent | rect. | 24 | 1 |
| 165 | 25.41 | temperature | 15 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 170 | 25.41 | temperature | 10 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 234 | 25.44 | temperature | 15 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 252 | 25.45 | temperature | 15 | 4320 | > th | dose independent | rect. | 7 | 17 |
| 341 | 25.56 | humidity | 60 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 355 | 25.58 | temperature | 15 | 4320 | < th | dose independent | rect. | 23 | 1 |
| 362 | 25.58 | temperature | 15 | 4320 | > th | dose independent | rect. | 18 | 18 |
| 363 | 25.58 | temperature | 15 | 4320 | > th | dose independent | rect. | 16 | 20 |
| 378 | 25.60 | temperature | 15 | 4320 | < th | dose independent | rect. | 18 | 20 |
| 382 | 25.61 | temperature | 15 | 4320 | > th | dose independent | sin | 18 | NA |
| 386 | 25.61 | temperature | 15 | 14400 | > th | dose independent | rect. | 15 | 2 |
| 393 | 25.61 | temperature | 15 | 4320 | < th | dose independent | rect. | 18 | 17 |
| 424 | 25.63 | temperature | 15 | 4320 | < th | dose independent | rect. | 18 | 13 |
| 447 | 25.63 | temperature | 15 | 4320 | < th | dose independent | rect. | 3 | 23 |
| 470 | 25.64 | temperature | 15 | 4320 | < th | dose independent | rect. | 13 | 22 |
| 473 | 25.64 | temperature | 15 | 4320 | < th | dose independent | rect. | 5 | 23 |
| 479 | 25.64 | humidity | 50 | 43200 | < th | dose dependent | rect. | 20 | 9 |
| 480 | 25.64 | humidity | 50 | 43200 | < th | dose dependent | rect. | 17 | 15 |
| 482 | 25.65 | temperature | 15 | 4320 | < th | dose independent | no | NA | NA |
| 501 | 25.65 | temperature | 15 | 4320 | < th | dose independent | rect. | 13 | 18 |
| 507 | 25.65 | temperature | 15 | 4320 | < th | dose independent | rect. | 10 | 20 |
| 524 | 25.65 | temperature | 15 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 555 | 25.66 | temperature | 15 | 4320 | < th | dose independent | rect. | 5 | 21 |
| 566 | 25.66 | temperature | 15 | 4320 | < th | dose independent | rect. | 1 | 23 |
| 571 | 25.66 | temperature | 15 | 4320 | < th | dose independent | rect. | 23 | 23 |
| 587 | 25.67 | temperature | 15 | 4320 | < th | dose independent | sin | 9 | NA |
| 627 | 25.67 | humidity | 50 | 43200 | < th | dose dependent | rect. | 16 | 17 |
| 628 | 25.68 | temperature | 15 | 4320 | > th | dose independent | no | NA | NA |
| 631 | 25.68 | humidity | 50 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 656 | 25.68 | temperature | 15 | 4320 | > th | dose independent | rect. | 24 | 23 |
| 686 | 25.69 | temperature | 15 | 4320 | > th | dose independent | rect. | 22 | 23 |
| 690 | 25.69 | humidity | 50 | 43200 | < th | dose dependent | rect. | 19 | 11 |
| 716 | 25.70 | temperature | 15 | 4320 | > th | dose independent | rect. | 10 | 23 |
| 767 | 25.72 | temperature | 15 | 4320 | < th | dose independent | rect. | 13 | 12 |
| 789 | 25.72 | humidity | 50 | 43200 | < th | dose dependent | rect. | 18 | 13 |
| 858 | 25.75 | humidity | 50 | 43200 | < th | dose independent | rect. | 17 | 14 |
| 920 | 25.78 | temperature | 15 | 4320 | > th | dose independent | sin | 7 | NA |
| 950 | 25.79 | temperature | 15 | 4320 | > th | dose independent | rect. | 24 | 12 |
| 976 | 25.80 | temperature | 10 | 43200 | > th | dose independent | sin | 20 | NA |
| 977 | 25.80 | temperature | 15 | 4320 | < th | dose independent | rect. | 2 | 2 |
| 980 | 25.80 | temperature | 15 | 4320 | < th | dose independent | rect. | 1 | 4 |