Os01g0644900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0644900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 116.81 | 0.508 | 3.38 | -1.16 | 0.317 | 2.57 | -1.18 | -3.39 | -0.168 | 6.48 | 93.43 | 621 | 13.4 | -- |
| 125.8 | 0.522 | 3.37 | -1.21 | 0.25 | 2.63 | -1.37 | -- | -0.15 | 6.1 | 93.45 | 638 | 13.2 | -- |
| 119.96 | 0.51 | 3.38 | -1.18 | 0.306 | 2.62 | -- | -3.8 | -0.16 | 6.71 | 93.48 | 616 | 13.3 | -- |
| 131.04 | 0.533 | 3.37 | -1.27 | 0.286 | 2.52 | -- | -- | -0.173 | 7.17 | 93.73 | 614 | 12.8 | -- |
| 124.68 | 0.52 | 3.38 | -1.15 | -- | 2.66 | -- | -3.7 | -0.165 | -- | 93.49 | 616 | 13.2 | -- |
| 176.34 | 0.623 | 3.41 | -1.22 | 0.532 | -- | -1.7 | -- | -0.36 | 6.37 | -- | -- | -- | -- |
| 183.49 | 0.634 | 3.4 | -1.24 | 0.525 | -- | -- | -- | -0.354 | 6.37 | -- | -- | -- | -- |
| 134.76 | 0.541 | 3.37 | -1.25 | -- | 2.85 | -- | -- | -0.161 | -- | 93.78 | 590 | 12.4 | -- |
| 167.62 | 0.603 | 3.35 | -- | 0.262 | 3.32 | -- | -- | -0.0786 | 6.63 | 94.82 | 525 | 12.4 | -- |
| 197.8 | 0.657 | 3.41 | -1.23 | -- | -- | -- | -- | -0.343 | -- | -- | -- | -- | -- |
| 224.06 | 0.7 | 3.37 | -- | 0.508 | -- | -- | -- | -0.216 | 6.51 | -- | -- | -- | -- |
| 171.23 | 0.609 | 3.35 | -- | -- | 3.72 | -- | -- | -0.0623 | -- | 94.83 | 512 | 12.4 | -- |
| 237.51 | 0.719 | 3.38 | -- | -- | -- | -- | -- | -0.207 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 137.45 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 3 |
| 10 | 139.85 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 11 | 139.85 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 24 | 142.85 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 8 | 18 |
| 42 | 144.62 | humidity | 90.0 | 720 | > th | dose dependent | sin | 17 | NA |
| 61 | 146.04 | humidity | 90.0 | 720 | < th | dose independent | rect. | 21 | 1 |
| 64 | 146.11 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 8 | 9 |
| 65 | 146.15 | wind | 1.0 | 270 | < th | dose independent | rect. | 3 | 1 |
| 70 | 146.49 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 6 |
| 89 | 147.04 | atmosphere | 1005.0 | 720 | < th | dose independent | rect. | 21 | 2 |
| 102 | 148.02 | humidity | 90.0 | 720 | > th | dose independent | rect. | 21 | 2 |
| 117 | 148.74 | atmosphere | 1005.0 | 720 | > th | dose independent | rect. | 21 | 1 |
| 121 | 148.83 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 9 | 13 |
| 122 | 148.83 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 9 | 15 |
| 123 | 148.83 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 9 | 18 |
| 139 | 148.92 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 16 |
| 140 | 148.93 | radiation | 1.0 | 1440 | < th | dose dependent | sin | 22 | NA |
| 141 | 148.93 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 11 |
| 142 | 148.93 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 13 |
| 201 | 149.83 | wind | 1.0 | 720 | < th | dose independent | rect. | 23 | 1 |
| 202 | 149.85 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 2 |
| 203 | 149.91 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 205 | 149.93 | atmosphere | 1005.0 | 720 | > th | dose independent | rect. | 19 | 6 |
| 211 | 150.08 | wind | 7.0 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 245 | 150.67 | wind | 7.0 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 269 | 151.06 | radiation | 1.0 | 1440 | < th | dose independent | sin | 22 | NA |
| 274 | 151.13 | radiation | 1.0 | 1440 | > th | dose independent | sin | 22 | NA |
| 278 | 151.18 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 11 |
| 279 | 151.18 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 13 |
| 281 | 151.19 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 16 |
| 282 | 151.20 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 9 |
| 285 | 151.21 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 11 | 8 |
| 308 | 151.28 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 316 | 151.37 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 9 | 13 |
| 317 | 151.37 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 9 | 15 |
| 318 | 151.38 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 9 | 18 |
| 319 | 151.39 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 9 | 11 |
| 328 | 151.41 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 9 | 10 |
| 395 | 151.57 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 7 | 14 |
| 410 | 151.62 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 18 | 8 |
| 494 | 152.13 | humidity | 80.0 | 1440 | > th | dose independent | sin | 22 | NA |
| 519 | 152.31 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 21 | 21 |
| 521 | 152.32 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 2 | 16 |
| 525 | 152.33 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 19 | 23 |
| 528 | 152.34 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 23 | 19 |
| 530 | 152.35 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 7 | 13 |
| 571 | 152.48 | atmosphere | 1005.0 | 90 | < th | dose dependent | rect. | 1 | 8 |
| 605 | 152.58 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 12 | 18 |
| 606 | 152.59 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 10 |
| 630 | 152.63 | wind | 1.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 640 | 152.63 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 12 | 21 |
| 648 | 152.66 | humidity | 50.0 | 1440 | > th | dose dependent | sin | 14 | NA |
| 710 | 152.81 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 23 |
| 721 | 152.83 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 13 | 2 |
| 724 | 152.84 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 726 | 152.84 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 728 | 152.84 | radiation | 20.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 779 | 152.84 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 781 | 152.84 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 783 | 152.84 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 893 | 153.02 | humidity | 80.0 | 1440 | < th | dose independent | sin | 23 | NA |
| 934 | 153.12 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 23 |
| 952 | 153.15 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 2 | 20 |
| 969 | 153.17 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 23 | 23 |
| 982 | 153.19 | radiation | 1.0 | 1440 | < th | dose dependent | no | NA | NA |