Os01g0644200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0644200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 205.19 | 0.673 | 3.87 | 0.269 | 0.217 | 1.79 | -0.053 | 1.01 | -0.141 | 7.56 | 25.5 | 829 | -- | -- |
| 206.21 | 0.669 | 3.85 | 0.442 | 0.183 | 1.72 | 0.107 | -- | -0.0927 | 7.46 | 26.49 | 826 | -- | -- |
| 205.2 | 0.667 | 3.87 | 0.271 | 0.219 | 1.79 | -- | 0.994 | -0.14 | 7.46 | 25.5 | 831 | -- | -- |
| 206.24 | 0.669 | 3.84 | 0.457 | 0.185 | 1.72 | -- | -- | -0.0882 | 7.29 | 26.46 | 831 | -- | -- |
| 206.79 | 0.67 | 3.86 | 0.339 | -- | 1.83 | -- | 0.713 | -0.101 | -- | 26.7 | 764 | -- | -- |
| 249.28 | 0.74 | 3.92 | -0.0363 | 0.446 | -- | -0.0224 | -- | -0.47 | 9.31 | -- | -- | -- | -- |
| 249.28 | 0.739 | 3.92 | -0.0372 | 0.446 | -- | -- | -- | -0.471 | 9.31 | -- | -- | -- | -- |
| 207.35 | 0.671 | 3.85 | 0.471 | -- | 1.78 | -- | -- | -0.0761 | -- | 27.12 | 745 | -- | -- |
| 211.01 | 0.677 | 3.86 | -- | 0.216 | 1.51 | -- | -- | -0.179 | 7.75 | 26.21 | 817 | -- | -- |
| 260.88 | 0.755 | 3.93 | -0.0393 | -- | -- | -- | -- | -0.469 | -- | -- | -- | -- | -- |
| 249.32 | 0.739 | 3.92 | -- | 0.446 | -- | -- | -- | -0.466 | 9.31 | -- | -- | -- | -- |
| 212.51 | 0.679 | 3.87 | -- | -- | 1.59 | -- | -- | -0.165 | -- | 27.2 | 729 | -- | -- |
| 260.92 | 0.754 | 3.93 | -- | -- | -- | -- | -- | -0.464 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 199.11 | temperature | 20 | 720 | > th | dose dependent | sin | 9 | NA |
| 3 | 199.64 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 5 |
| 4 | 199.64 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 7 |
| 19 | 200.27 | temperature | 20 | 720 | > th | dose dependent | rect. | 19 | 16 |
| 112 | 202.51 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 17 |
| 133 | 202.72 | temperature | 30 | 720 | < th | dose dependent | rect. | 19 | 15 |
| 174 | 203.40 | temperature | 30 | 720 | < th | dose dependent | sin | 9 | NA |
| 257 | 204.02 | temperature | 20 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 489 | 205.50 | temperature | 25 | 1440 | < th | dose independent | rect. | 16 | 19 |
| 499 | 205.55 | temperature | 25 | 720 | < th | dose dependent | rect. | 20 | 22 |
| 522 | 205.70 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 1 |
| 524 | 205.70 | temperature | 25 | 720 | < th | dose dependent | rect. | 6 | 23 |
| 544 | 205.76 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 575 | 205.89 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 576 | 205.89 | temperature | 25 | 720 | < th | dose dependent | rect. | 24 | 23 |
| 591 | 206.01 | temperature | 25 | 1440 | < th | dose independent | rect. | 16 | 5 |
| 592 | 206.01 | temperature | 25 | 1440 | > th | dose independent | rect. | 16 | 20 |
| 602 | 206.08 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 632 | 206.23 | temperature | 25 | 1440 | > th | dose independent | rect. | 16 | 4 |
| 635 | 206.25 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 660 | 206.37 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 667 | 206.41 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 4 |
| 685 | 206.49 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 11 |
| 702 | 206.59 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 3 |
| 707 | 206.61 | temperature | 25 | 4320 | > th | dose dependent | rect. | 6 | 8 |
| 731 | 206.72 | temperature | 25 | 4320 | > th | dose dependent | rect. | 12 | 1 |
| 744 | 206.75 | temperature | 25 | 4320 | > th | dose dependent | sin | 3 | NA |
| 769 | 206.81 | temperature | 25 | 4320 | > th | dose dependent | rect. | 10 | 3 |
| 774 | 206.84 | temperature | 25 | 4320 | > th | dose dependent | rect. | 6 | 12 |
| 827 | 206.93 | temperature | 25 | 4320 | > th | dose dependent | rect. | 24 | 18 |
| 937 | 207.10 | temperature | 25 | 4320 | < th | dose independent | rect. | 16 | 8 |