Os01g0644000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Twin-arginine translocation pathway signal domain containing protein.
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Os01g0644000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Twin-arginine translocation pathway signal domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 758 | 1.29 | 6.51 | 3.39 | 0.855 | 2.5 | -1.54 | 7.53 | 1.23 | 6.34 | 994.2 | 10283 | -- | -- |
| 820.87 | 1.33 | 6.35 | 4.79 | 0.846 | 3.11 | -1.62 | -- | 1.49 | 6.46 | 991.4 | 11034 | -- | -- |
| 763.03 | 1.29 | 6.51 | 3.36 | 0.856 | 2.51 | -- | 7.6 | 1.23 | 6.85 | 993.1 | 10204 | -- | -- |
| 826.52 | 1.34 | 6.35 | 4.77 | 0.847 | 3.11 | -- | -- | 1.5 | 7 | 991.3 | 11047 | -- | -- |
| 801.06 | 1.32 | 6.53 | 3.39 | -- | 2.47 | -- | 7.49 | 1.25 | -- | 992.7 | 10413 | -- | -- |
| 1013.75 | 1.49 | 6.36 | 4.09 | 0.814 | -- | -1.68 | -- | 1.48 | 6.39 | -- | -- | -- | -- |
| 1019.46 | 1.5 | 6.35 | 4.08 | 0.816 | -- | -- | -- | 1.49 | 7.07 | -- | -- | -- | -- |
| 864 | 1.37 | 6.37 | 4.79 | -- | 3.08 | -- | -- | 1.51 | -- | 984.6 | 10918 | -- | -- |
| 1389.29 | 1.74 | 6.46 | -- | 0.884 | 1.8 | -- | -- | 0.998 | 6.75 | 988.1 | 11297 | -- | -- |
| 1054.56 | 1.52 | 6.37 | 4.09 | -- | -- | -- | -- | 1.5 | -- | -- | -- | -- | -- |
| 1457.19 | 1.79 | 6.45 | -- | 0.863 | -- | -- | -- | 1.03 | 6.77 | -- | -- | -- | -- |
| 1430.15 | 1.76 | 6.48 | -- | -- | 1.77 | -- | -- | 1.01 | -- | 990 | 11408 | -- | -- |
| 1496.1 | 1.81 | 6.47 | -- | -- | -- | -- | -- | 1.05 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 734.35 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 21 | 2 |
| 2 | 735.56 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 2 | 3 |
| 3 | 740.93 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 5 | 744.82 | wind | 1.0 | 43200 | < th | dose independent | rect. | 3 | 2 |
| 6 | 745.00 | wind | 1.0 | 43200 | > th | dose independent | rect. | 3 | 2 |
| 7 | 748.33 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 4 | 1 |
| 11 | 751.69 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 3 | 5 |
| 12 | 751.96 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 20 | 4 |
| 13 | 752.23 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 14 | 752.87 | radiation | 10.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 15 | 752.88 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 16 | 753.05 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 20 | 3 |
| 20 | 754.24 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 21 | 754.27 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 22 | 754.42 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 23 | 754.42 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 28 | 756.39 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 3 | 5 |
| 29 | 756.65 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 3 | 5 |
| 30 | 756.65 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 3 | 5 |
| 38 | 757.68 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 24 | 1 |
| 40 | 758.09 | temperature | 25.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 41 | 758.97 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 44 | 759.82 | radiation | 30.0 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 61 | 760.22 | temperature | 30.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 67 | 760.45 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 24 | 7 |
| 68 | 760.56 | radiation | 10.0 | 14400 | > th | dose independent | rect. | 10 | 4 |
| 69 | 760.81 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 3 | 14 |
| 73 | 761.35 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 75 | 761.42 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 78 | 761.61 | atmosphere | 1010.0 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 79 | 761.78 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 4 | 11 |
| 80 | 761.78 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 2 | 13 |
| 81 | 761.79 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 6 | 9 |
| 85 | 761.80 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 8 | 7 |
| 88 | 761.82 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 23 | 5 |
| 97 | 762.29 | temperature | 30.0 | 43200 | > th | dose independent | rect. | 8 | 7 |
| 111 | 762.45 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 11 | 4 |
| 116 | 762.58 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 20 | 3 |
| 119 | 762.67 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 20 | 5 |
| 122 | 762.77 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 10 | 4 |
| 137 | 763.15 | temperature | 30.0 | 43200 | < th | dose independent | sin | 5 | NA |
| 178 | 763.68 | temperature | 30.0 | 43200 | > th | dose independent | sin | 5 | NA |
| 186 | 763.88 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 11 | 3 |
| 192 | 763.99 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 220 | 764.37 | atmosphere | 1010.0 | 14400 | > th | dose independent | rect. | 19 | 5 |
| 224 | 764.54 | temperature | 25.0 | 43200 | > th | dose dependent | rect. | 19 | 16 |
| 233 | 764.74 | temperature | 25.0 | 43200 | > th | dose dependent | rect. | 7 | 4 |
| 234 | 764.74 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 3 | 11 |
| 245 | 764.80 | temperature | 30.0 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 278 | 764.99 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 304 | 765.04 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 13 | 2 |
| 321 | 765.15 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 20 | 5 |
| 346 | 765.46 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 20 | 3 |
| 395 | 765.87 | atmosphere | 1010.0 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 442 | 766.32 | temperature | 25.0 | 43200 | > th | dose dependent | sin | 9 | NA |
| 459 | 766.47 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 13 | 5 |
| 481 | 766.58 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 504 | 766.69 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 13 | 23 |
| 554 | 766.73 | temperature | 30.0 | 43200 | < th | dose independent | no | NA | NA |
| 576 | 766.73 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 8 | 23 |
| 609 | 766.86 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 8 | 10 |
| 610 | 766.87 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 2 | 18 |
| 611 | 766.87 | temperature | 30.0 | 43200 | > th | dose independent | rect. | 14 | 22 |
| 639 | 766.99 | temperature | 30.0 | 43200 | > th | dose independent | no | NA | NA |
| 735 | 767.02 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 23 | 18 |
| 739 | 767.06 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 2 | 18 |
| 740 | 767.06 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 2 | 18 |
| 742 | 767.08 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 11 | 23 |
| 745 | 767.14 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 9 | 6 |
| 770 | 767.24 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 13 | 12 |
| 798 | 767.41 | temperature | 30.0 | 43200 | > th | dose independent | rect. | 11 | 23 |
| 799 | 767.43 | radiation | 10.0 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 887 | 768.19 | radiation | 20.0 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 942 | 768.61 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 14 | 2 |
| 950 | 768.65 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 9 | 9 |
| 982 | 768.78 | atmosphere | 1010.0 | 14400 | > th | dose independent | rect. | 19 | 9 |
| 999 | 768.93 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 24 | 7 |