Os01g0643900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Oleosin family protein.
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Os01g0643900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Oleosin family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 17.48 | 0.196 | 2.85 | -0.0694 | 0.0759 | -0.0523 | -0.593 | 0.684 | -0.0524 | 7.81 | 83 | 848 | -- | -- |
| 17.88 | 0.198 | 2.85 | -0.00697 | 0.0784 | -0.091 | -0.397 | -- | -0.0532 | 6.32 | 82.55 | 1590 | -- | -- |
| 17.9 | 0.197 | 2.85 | -0.1 | 0.0621 | -0.111 | -- | 0.788 | -0.0572 | 7.76 | 73 | 1333 | -- | -- |
| 18.22 | 0.2 | 2.85 | -0.00777 | 0.0789 | -0.0996 | -- | -- | -0.0547 | 7.3 | 87.96 | 1824 | -- | -- |
| 18.08 | 0.198 | 2.85 | -0.0967 | -- | -0.104 | -- | 0.739 | -0.0586 | -- | 72 | 1336 | -- | -- |
| 18.27 | 0.2 | 2.85 | -0.0171 | 0.046 | -- | -0.411 | -- | -0.037 | 6.57 | -- | -- | -- | -- |
| 18.49 | 0.201 | 2.85 | -0.021 | 0.0711 | -- | -- | -- | -0.0348 | 10.1 | -- | -- | -- | -- |
| 18.51 | 0.201 | 2.85 | -0.0188 | -- | -0.0672 | -- | -- | -0.0411 | -- | 72 | 1336 | -- | -- |
| 18.22 | 0.2 | 2.85 | -- | 0.079 | -0.101 | -- | -- | -0.0541 | 7.28 | 87.96 | 1824 | -- | -- |
| 18.8 | 0.203 | 2.85 | -0.022 | -- | -- | -- | -- | -0.0349 | -- | -- | -- | -- | -- |
| 18.5 | 0.201 | 2.85 | -- | 0.0712 | -- | -- | -- | -0.0324 | 10.1 | -- | -- | -- | -- |
| 18.52 | 0.201 | 2.85 | -- | -- | -0.0676 | -- | -- | -0.0391 | -- | 72 | 1336 | -- | -- |
| 18.81 | 0.202 | 2.85 | -- | -- | -- | -- | -- | -0.0325 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 13.69 | humidity | 70 | 90 | < th | dose dependent | rect. | 6 | 3 |
| 12 | 13.70 | humidity | 70 | 90 | < th | dose dependent | rect. | 18 | 15 |
| 14 | 13.75 | humidity | 70 | 1440 | > th | dose independent | rect. | 22 | 9 |
| 19 | 13.76 | humidity | 70 | 1440 | > th | dose independent | rect. | 24 | 7 |
| 29 | 13.78 | humidity | 70 | 4320 | < th | dose independent | rect. | 6 | 1 |
| 30 | 13.78 | humidity | 70 | 270 | < th | dose independent | rect. | 7 | 1 |
| 64 | 13.78 | humidity | 70 | 4320 | < th | dose dependent | rect. | 6 | 1 |
| 101 | 13.79 | humidity | 70 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 121 | 13.79 | radiation | 20 | 270 | > th | dose dependent | rect. | 6 | 1 |
| 165 | 13.82 | radiation | 20 | 270 | > th | dose independent | rect. | 6 | 1 |
| 168 | 13.82 | humidity | 70 | 1440 | > th | dose independent | rect. | 3 | 4 |
| 376 | 14.40 | radiation | 40 | 10 | < th | dose independent | sin | 12 | NA |
| 395 | 14.48 | humidity | 80 | 1440 | > th | dose independent | rect. | 1 | 1 |
| 396 | 14.49 | humidity | 80 | 720 | < th | dose independent | rect. | 1 | 1 |
| 400 | 14.49 | humidity | 80 | 720 | < th | dose dependent | rect. | 1 | 1 |
| 499 | 14.86 | humidity | 70 | 10 | < th | dose dependent | rect. | 7 | 3 |
| 511 | 14.87 | radiation | 30 | 1440 | < th | dose independent | rect. | 22 | 9 |
| 515 | 14.89 | radiation | 30 | 1440 | < th | dose independent | rect. | 19 | 12 |
| 516 | 14.89 | radiation | 20 | 10 | > th | dose dependent | sin | 11 | NA |
| 519 | 14.91 | radiation | 30 | 1440 | < th | dose independent | rect. | 6 | 1 |
| 579 | 15.06 | humidity | 90 | 10 | < th | dose dependent | rect. | 1 | 7 |
| 639 | 15.14 | humidity | 70 | 10 | < th | dose dependent | sin | 11 | NA |
| 660 | 15.15 | humidity | 70 | 10 | < th | dose independent | rect. | 7 | 1 |
| 735 | 15.15 | humidity | 70 | 10 | < th | dose dependent | rect. | 7 | 1 |