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Os01g0643800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Mitogen-activated protein kinase.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.61 (0.0221) R2 : 0.0208
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.145 (0.0466) R2dN8 : 0.0269 R2N8 : 0.0208
σ : 0.417
deviance : 79.77
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
53.71 0.344 8.61 -0.57 0.303 -0.101 -0.0758 0.841 -0.173 0.935 20.5 16 -- --
55.18 0.346 8.62 -0.641 0.307 -0.326 -0.469 -- -0.181 0.343 19.5 302 -- --
53.73 0.344 8.6 -0.562 0.304 -0.0986 -- 0.867 -0.171 0.969 20.5 16 -- --
55.73 0.348 8.62 -0.624 0.293 -0.356 -- -- -0.174 0.463 19.5 279 -- --
59.05 0.36 8.6 -0.535 -- -0.197 -- 0.816 -0.15 -- 20.5 16 -- --
57.85 0.357 8.63 -0.77 0.323 -- -0.442 -- -0.236 0.817 -- -- -- --
58.67 0.359 8.63 -0.754 0.325 -- -- -- -0.234 0.916 -- -- -- --
60.71 0.364 8.61 -0.67 -- -0.267 -- -- -0.155 -- 21.8 7 -- --
62.72 0.369 8.61 -- 0.313 -0.637 -- -- -0.0646 0.365 19.8 3074 -- --
65.24 0.377 8.62 -0.742 -- -- -- -- -0.227 -- -- -- -- --
73.67 0.401 8.61 -- 0.313 -- -- -- -0.15 0.812 -- -- -- --
65.65 0.377 8.58 -- -- -0.657 -- -- -0.0366 -- 16 46321 -- --
79.77 0.417 8.61 -- -- -- -- -- -0.145 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 53.13 temperature 20 10 > th dose independent rect. 17 19
5 53.33 humidity 80 720 < th dose independent rect. 19 14
8 53.38 temperature 20 30 > th dose independent rect. 19 17
15 53.49 humidity 80 720 < th dose dependent rect. 20 5
17 53.51 humidity 80 720 > th dose independent rect. 19 14
35 53.67 temperature 20 10 > th dose independent rect. 11 23
38 53.69 humidity 80 720 < th dose dependent rect. 19 13
53 53.81 temperature 20 10 > th dose independent rect. 6 22
64 53.89 humidity 80 1440 < th dose independent rect. 23 10
71 53.94 temperature 20 10 > th dose independent rect. 2 23
77 53.97 temperature 20 10 < th dose independent rect. 12 23
82 54.00 temperature 20 270 < th dose independent rect. 22 21
100 54.10 humidity 80 720 > th dose independent sin 10 NA
101 54.10 temperature 20 30 > th dose independent rect. 22 14
129 54.19 temperature 20 10 > th dose independent no NA NA
139 54.21 wind 3 43200 < th dose dependent rect. 9 2
149 54.24 humidity 80 1440 > th dose independent rect. 23 10
153 54.24 temperature 20 30 < th dose independent rect. 22 23
156 54.25 humidity 80 720 < th dose independent sin 10 NA
157 54.25 humidity 80 720 > th dose independent rect. 19 8
160 54.25 temperature 20 10 < th dose independent rect. 9 22
164 54.26 radiation 20 1440 > th dose independent rect. 13 1
172 54.27 humidity 80 720 < th dose independent rect. 19 9
180 54.28 temperature 20 10 < th dose independent rect. 1 23
182 54.29 humidity 80 1440 < th dose independent sin 8 NA
184 54.29 radiation 10 1440 < th dose independent rect. 16 12
188 54.29 radiation 20 1440 < th dose independent rect. 12 21
191 54.30 temperature 20 30 > th dose independent sin 7 NA
192 54.30 radiation 10 1440 < th dose independent rect. 16 6
204 54.31 humidity 80 720 > th dose independent rect. 20 2
205 54.31 radiation 10 1440 < th dose independent rect. 16 3
214 54.32 temperature 20 270 > th dose independent rect. 4 21
224 54.34 temperature 20 10 < th dose independent no NA NA
226 54.34 radiation 20 1440 < th dose independent rect. 12 4
232 54.34 temperature 20 10 < th dose independent rect. 17 23
234 54.35 humidity 80 720 < th dose independent rect. 21 1
239 54.35 temperature 20 10 > th dose independent rect. 19 23
241 54.35 temperature 20 10 < th dose independent rect. 19 23
249 54.37 temperature 20 10 < th dose independent rect. 15 23
263 54.39 temperature 20 30 > th dose independent rect. 22 23
264 54.39 temperature 20 10 < th dose independent rect. 3 23
265 54.39 radiation 1 1440 > th dose dependent rect. 17 2
280 54.40 temperature 20 10 < th dose independent rect. 5 23
289 54.41 temperature 20 10 > th dose independent rect. 24 23
314 54.45 wind 7 1440 < th dose independent rect. 14 2
348 54.49 wind 7 1440 > th dose independent rect. 14 2
352 54.50 temperature 20 270 > th dose independent sin 7 NA
354 54.50 radiation 20 1440 < th dose independent rect. 12 10
359 54.50 radiation 20 1440 < th dose independent rect. 12 16
367 54.51 radiation 20 1440 < th dose independent rect. 12 6
387 54.52 humidity 80 1440 > th dose independent rect. 19 20
389 54.53 wind 3 43200 < th dose independent rect. 9 2
394 54.53 radiation 10 1440 < th dose independent rect. 14 8
395 54.53 radiation 10 1440 < th dose independent rect. 14 10
398 54.53 radiation 10 1440 < th dose independent rect. 14 14
407 54.54 radiation 10 1440 < th dose independent rect. 14 5
416 54.54 humidity 80 1440 < th dose independent rect. 19 19
422 54.55 radiation 10 1440 < th dose independent sin 15 NA
486 54.58 humidity 80 1440 > th dose independent rect. 12 22
487 54.58 humidity 80 1440 < th dose dependent sin 11 NA
522 54.61 radiation 40 1440 < th dose dependent rect. 17 11
526 54.62 humidity 70 1440 < th dose independent rect. 17 1
531 54.62 temperature 20 270 < th dose independent rect. 22 12
543 54.63 wind 3 43200 > th dose independent rect. 9 2
554 54.64 temperature 20 4320 > th dose independent rect. 12 7
557 54.64 wind 5 720 > th dose independent rect. 23 19
568 54.64 radiation 20 1440 < th dose dependent rect. 17 9
586 54.65 radiation 20 1440 < th dose dependent rect. 17 7
599 54.66 temperature 20 30 > th dose independent rect. 4 17
617 54.67 temperature 20 30 > th dose independent rect. 2 10
636 54.67 radiation 20 1440 < th dose dependent rect. 17 5
683 54.69 radiation 20 1440 < th dose dependent rect. 17 1
696 54.70 temperature 20 270 < th dose independent rect. 6 13
700 54.70 temperature 20 10 < th dose independent rect. 12 18
717 54.71 temperature 20 1440 > th dose independent rect. 6 6
757 54.73 temperature 20 4320 > th dose independent rect. 17 2
768 54.73 humidity 80 1440 < th dose independent rect. 13 21
775 54.74 temperature 20 1440 > th dose independent rect. 7 12
783 54.74 atmosphere 1005 270 > th dose independent rect. 24 17
806 54.75 wind 5 720 > th dose dependent rect. 23 17
812 54.76 temperature 20 1440 < th dose independent rect. 6 6
826 54.76 radiation 20 1440 > th dose independent rect. 12 20
838 54.77 temperature 20 4320 < th dose independent rect. 12 7
856 54.78 radiation 20 14400 < th dose independent rect. 5 1
872 54.79 temperature 20 270 < th dose independent sin 6 NA
875 54.79 temperature 20 4320 < th dose independent rect. 17 2
879 54.79 wind 5 43200 < th dose independent rect. 10 6
938 54.80 wind 9 14400 > th dose dependent rect. 14 6
939 54.80 wind 5 43200 < th dose dependent rect. 8 6
941 54.81 temperature 20 4320 < th dose independent rect. 15 4
944 54.81 wind 5 43200 > th dose independent rect. 10 6
961 54.81 temperature 20 10 > th dose independent rect. 9 23
987 54.82 temperature 20 270 > th dose independent rect. 3 9