Os01g0641800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : AAA ATPase domain containing protein.
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Os01g0641800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : AAA ATPase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 108.31 | 0.489 | 7.97 | 1.44 | 0.628 | 0.108 | -0.124 | -1.88 | -0.781 | 12.7 | 0.6889 | 4142 | -- | -- |
| 112.42 | 0.494 | 7.94 | 1.25 | 0.608 | 0.356 | -0.0775 | -- | -0.751 | 12.8 | 3.704 | 5984 | -- | -- |
| 107.97 | 0.484 | 7.97 | 1.45 | 0.632 | 0.0893 | -- | -1.97 | -0.785 | 12.6 | 0.6944 | 4334 | -- | -- |
| 112.21 | 0.493 | 7.93 | 1.19 | 0.601 | 0.489 | -- | -- | -0.719 | 12.9 | 3.762 | 6009 | -- | -- |
| 129.54 | 0.53 | 7.96 | 1.21 | -- | 0.743 | -- | -1.8 | -0.64 | -- | 1.898 | 5205 | -- | -- |
| 115.71 | 0.504 | 7.94 | 1.37 | 0.632 | -- | -0.239 | -- | -0.818 | 12.7 | -- | -- | -- | -- |
| 115.95 | 0.504 | 7.94 | 1.36 | 0.632 | -- | -- | -- | -0.819 | 12.7 | -- | -- | -- | -- |
| 131.16 | 0.533 | 7.91 | 1.08 | -- | 0.801 | -- | -- | -0.633 | -- | 3.4 | 5307 | -- | -- |
| 138.29 | 0.548 | 7.92 | -- | 0.586 | 1.21 | -- | -- | -0.718 | 12.8 | 3.899 | 5969 | -- | -- |
| 140.98 | 0.555 | 7.95 | 1.34 | -- | -- | -- | -- | -0.83 | -- | -- | -- | -- | -- |
| 164.96 | 0.601 | 7.98 | -- | 0.612 | -- | -- | -- | -0.971 | 12.6 | -- | -- | -- | -- |
| 152.05 | 0.574 | 7.93 | -- | -- | 1.59 | -- | -- | -0.693 | -- | 3.8 | 6631 | -- | -- |
| 188.43 | 0.641 | 7.99 | -- | -- | -- | -- | -- | -0.979 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 101.54 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 17 | 3 |
| 3 | 102.91 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 4 | 102.91 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 17 | 1 |
| 7 | 103.78 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 8 | 103.94 | wind | 1.0 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 10 | 104.05 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 16 | 3 |
| 11 | 104.05 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 16 | 3 |
| 12 | 104.08 | wind | 9.0 | 4320 | < th | dose dependent | rect. | 17 | 1 |
| 13 | 104.27 | wind | 9.0 | 4320 | < th | dose independent | rect. | 17 | 2 |
| 23 | 104.56 | humidity | 90.0 | 10 | < th | dose independent | rect. | 19 | 12 |
| 24 | 104.58 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 20 | 4 |
| 27 | 104.69 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 28 | 104.70 | wind | 9.0 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 38 | 105.14 | wind | 5.0 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 44 | 105.25 | wind | 5.0 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 64 | 105.55 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 15 | 6 |
| 98 | 105.95 | wind | 9.0 | 4320 | < th | dose independent | rect. | 16 | 11 |
| 101 | 105.98 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 109 | 106.06 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 23 | 4 |
| 110 | 106.06 | wind | 9.0 | 4320 | < th | dose dependent | rect. | 13 | 16 |
| 129 | 106.17 | wind | 1.0 | 4320 | > th | dose dependent | rect. | 13 | 16 |
| 156 | 106.40 | atmosphere | 1000.0 | 1440 | < th | dose independent | rect. | 8 | 3 |
| 186 | 106.55 | wind | 1.0 | 4320 | > th | dose dependent | rect. | 17 | 4 |
| 195 | 106.58 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 11 | 7 |
| 197 | 106.60 | humidity | 90.0 | 10 | < th | dose independent | rect. | 19 | 20 |
| 203 | 106.65 | wind | 9.0 | 4320 | < th | dose dependent | rect. | 17 | 4 |
| 210 | 106.67 | wind | 1.0 | 4320 | < th | dose dependent | rect. | 7 | 1 |
| 214 | 106.68 | wind | 1.0 | 4320 | > th | dose dependent | rect. | 13 | 9 |
| 216 | 106.69 | atmosphere | 1000.0 | 1440 | > th | dose independent | rect. | 7 | 4 |
| 217 | 106.69 | wind | 9.0 | 4320 | < th | dose dependent | rect. | 13 | 9 |
| 220 | 106.70 | wind | 1.0 | 4320 | > th | dose dependent | rect. | 14 | 7 |
| 225 | 106.71 | wind | 9.0 | 4320 | < th | dose dependent | rect. | 14 | 7 |
| 235 | 106.74 | atmosphere | 1000.0 | 1440 | < th | dose dependent | rect. | 8 | 3 |
| 250 | 106.79 | atmosphere | 1000.0 | 1440 | > th | dose independent | rect. | 9 | 2 |
| 285 | 106.88 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 294 | 106.89 | wind | 1.0 | 270 | > th | dose independent | rect. | 17 | 14 |
| 297 | 106.91 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 300 | 106.91 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 17 | 14 |
| 303 | 106.92 | wind | 7.0 | 4320 | < th | dose dependent | rect. | 14 | 4 |
| 309 | 106.93 | wind | 1.0 | 4320 | > th | dose dependent | rect. | 14 | 4 |
| 319 | 106.96 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 12 | 13 |
| 331 | 106.99 | wind | 5.0 | 4320 | > th | dose independent | rect. | 13 | 5 |
| 344 | 107.00 | radiation | 10.0 | 270 | < th | dose independent | rect. | 17 | 14 |
| 351 | 107.01 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 369 | 107.05 | humidity | 50.0 | 270 | > th | dose independent | rect. | 17 | 14 |
| 372 | 107.05 | atmosphere | 1005.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 375 | 107.05 | atmosphere | 1000.0 | 1440 | < th | dose dependent | rect. | 22 | 14 |
| 420 | 107.12 | wind | 9.0 | 4320 | < th | dose dependent | sin | 16 | NA |
| 434 | 107.14 | atmosphere | 1005.0 | 14400 | < th | dose independent | sin | 17 | NA |
| 468 | 107.17 | wind | 5.0 | 4320 | < th | dose independent | rect. | 13 | 5 |
| 483 | 107.19 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 9 | 5 |
| 490 | 107.19 | wind | 1.0 | 4320 | > th | dose dependent | sin | 16 | NA |
| 497 | 107.20 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 8 | 9 |
| 500 | 107.20 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 11 | 14 |
| 501 | 107.20 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 9 | 16 |
| 518 | 107.21 | atmosphere | 1010.0 | 14400 | < th | dose dependent | rect. | 23 | 1 |
| 539 | 107.23 | atmosphere | 1000.0 | 1440 | > th | dose independent | rect. | 24 | 1 |
| 577 | 107.25 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 17 | 14 |
| 604 | 107.27 | wind | 5.0 | 4320 | > th | dose independent | rect. | 13 | 8 |
| 617 | 107.27 | atmosphere | 1010.0 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 618 | 107.27 | atmosphere | 1010.0 | 14400 | < th | dose dependent | rect. | 21 | 3 |
| 636 | 107.28 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 20 | 22 |
| 664 | 107.30 | wind | 1.0 | 4320 | > th | dose independent | rect. | 10 | 1 |
| 666 | 107.30 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 674 | 107.30 | atmosphere | 1000.0 | 1440 | < th | dose independent | rect. | 1 | 11 |
| 688 | 107.30 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 765 | 107.33 | wind | 9.0 | 4320 | > th | dose dependent | sin | 16 | NA |
| 777 | 107.34 | atmosphere | 1005.0 | 14400 | > th | dose independent | sin | 18 | NA |
| 779 | 107.34 | atmosphere | 1005.0 | 14400 | < th | dose independent | no | NA | NA |
| 787 | 107.34 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 14 | 14 |
| 791 | 107.34 | atmosphere | 1010.0 | 14400 | < th | dose dependent | rect. | 10 | 1 |
| 797 | 107.34 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 17 | 10 |
| 800 | 107.34 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 14 | 14 |
| 828 | 107.36 | wind | 5.0 | 4320 | < th | dose independent | rect. | 13 | 8 |
| 839 | 107.36 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 15 | 23 |
| 860 | 107.37 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 20 | 22 |
| 929 | 107.39 | atmosphere | 1010.0 | 14400 | < th | dose dependent | rect. | 10 | 14 |
| 934 | 107.40 | atmosphere | 1000.0 | 1440 | > th | dose independent | rect. | 23 | 13 |
| 953 | 107.40 | atmosphere | 1010.0 | 14400 | < th | dose dependent | rect. | 14 | 11 |
| 954 | 107.40 | atmosphere | 1010.0 | 14400 | < th | dose dependent | rect. | 12 | 13 |
| 960 | 107.41 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 15 | 10 |