Os01g0641600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ubiquitin domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0641600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Ubiquitin domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 167.96 | 0.609 | 2.68 | 0.527 | 0.0896 | -4.81 | -0.617 | 50.4 | 0.024 | 17.9 | 33.7 | 71 | -- | -- |
| 182.7 | 0.634 | 2.75 | -0.00586 | 0.109 | 1.91 | -0.521 | -- | 0.0225 | 18.3 | 33.7 | 71 | -- | -- |
| 168.52 | 0.605 | 2.68 | 0.52 | 0.123 | -4.88 | -- | 51.1 | 0.0193 | 20.5 | 33.74 | 69 | -- | -- |
| 176.38 | 0.619 | 2.76 | 0.0457 | 0.136 | 2.3 | -- | -- | -0.0132 | 18.8 | 35.05 | 90 | -- | -- |
| 169.29 | 0.606 | 2.68 | 0.523 | -- | -4.84 | -- | 50.8 | 0.0196 | -- | 33.71 | 69 | -- | -- |
| 190.64 | 0.647 | 2.75 | 0.0202 | 0.143 | -- | -0.427 | -- | 0.00851 | 18.3 | -- | -- | -- | -- |
| 191.04 | 0.647 | 2.75 | 0.0245 | 0.143 | -- | -- | -- | 0.00663 | 19.1 | -- | -- | -- | -- |
| 172.5 | 0.612 | 2.76 | -0.0226 | -- | 2.88 | -- | -- | 0.0188 | -- | 35.1 | 94 | -- | -- |
| 171.65 | 0.61 | 2.74 | -- | 0.123 | 2.96 | -- | -- | 0.0331 | 20.1 | 35.1 | 95 | -- | -- |
| 192.12 | 0.648 | 2.75 | 0.0218 | -- | -- | -- | -- | 0.00406 | -- | -- | -- | -- | -- |
| 191.05 | 0.647 | 2.76 | -- | 0.143 | -- | -- | -- | 0.0039 | 19.1 | -- | -- | -- | -- |
| 172.43 | 0.612 | 2.75 | -- | -- | 2.98 | -- | -- | 0.0321 | -- | 35.1 | 95 | -- | -- |
| 192.14 | 0.647 | 2.75 | -- | -- | -- | -- | -- | 0.00165 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 168.03 | humidity | 50 | 270 | < th | dose independent | rect. | 13 | 1 |
| 2 | 168.03 | humidity | 50 | 270 | < th | dose dependent | rect. | 13 | 1 |
| 3 | 168.03 | atmosphere | 1000 | 270 | < th | dose dependent | rect. | 12 | 1 |
| 6 | 168.05 | atmosphere | 1000 | 270 | < th | dose independent | rect. | 12 | 1 |
| 9 | 168.90 | atmosphere | 1000 | 30 | < th | dose dependent | rect. | 13 | 3 |
| 42 | 173.56 | wind | 1 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 44 | 173.64 | temperature | 30 | 10 | > th | dose dependent | sin | 14 | NA |
| 45 | 173.71 | temperature | 30 | 30 | > th | dose dependent | rect. | 12 | 7 |
| 136 | 174.91 | wind | 1 | 90 | < th | dose independent | rect. | 4 | 1 |
| 155 | 175.55 | temperature | 30 | 270 | > th | dose dependent | rect. | 12 | 1 |
| 160 | 175.79 | wind | 1 | 10 | < th | dose independent | rect. | 22 | 1 |
| 162 | 175.79 | wind | 1 | 10 | < th | dose dependent | rect. | 22 | 1 |
| 202 | 176.87 | wind | 1 | 10 | < th | dose dependent | rect. | 15 | 8 |
| 204 | 176.88 | wind | 1 | 10 | < th | dose dependent | rect. | 17 | 6 |
| 262 | 177.80 | temperature | 30 | 270 | > th | dose dependent | rect. | 18 | 20 |
| 310 | 178.49 | temperature | 30 | 90 | > th | dose dependent | rect. | 17 | 23 |
| 330 | 178.63 | temperature | 30 | 90 | > th | dose dependent | no | NA | NA |
| 549 | 179.43 | temperature | 20 | 90 | < th | dose independent | rect. | 5 | 2 |
| 562 | 179.67 | atmosphere | 995 | 10 | > th | dose independent | sin | 6 | NA |
| 603 | 179.85 | temperature | 30 | 270 | > th | dose dependent | sin | 6 | NA |
| 615 | 179.91 | atmosphere | 995 | 90 | > th | dose independent | rect. | 7 | 22 |
| 782 | 180.15 | atmosphere | 995 | 10 | < th | dose independent | sin | 6 | NA |
| 783 | 180.15 | atmosphere | 995 | 10 | < th | dose dependent | sin | 6 | NA |
| 786 | 180.16 | atmosphere | 995 | 10 | < th | dose independent | rect. | 15 | 1 |