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Os01g0641100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.2 (0.0159) R2 : 0.000268
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0117 (0.0336) R2dN8 : 0.000346 R2N8 : 0.000268
σ : 0.3
deviance : 41.41
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
25.75 0.238 9.19 0.205 0.364 -1.26 0.344 -0.396 0.0134 10.5 15.18 4064 -- --
25.64 0.236 9.19 0.2 0.365 -1.05 0.338 -- 0.0104 10.5 15.2 3742 -- --
26.09 0.238 9.19 0.21 0.363 -1.21 -- -0.213 0.0118 10.4 15.16 3764 -- --
26.09 0.238 9.19 0.211 0.366 -1.12 -- -- 0.0107 10.4 15.15 3765 -- --
34.18 0.272 9.2 0.21 -- -1.07 -- -0.215 0.0114 -- 15.3 4213 -- --
29.53 0.255 9.18 0.362 0.349 -- 0.444 -- 0.0533 10.5 -- -- -- --
30.32 0.258 9.18 0.379 0.349 -- -- -- 0.0541 10.3 -- -- -- --
34.15 0.272 9.2 0.204 -- -0.97 -- -- 0.00856 -- 15.18 3550 -- --
27 0.242 9.2 -- 0.363 -1.23 -- -- -0.0214 10.4 15.34 3767 -- --
37.72 0.287 9.19 0.374 -- -- -- -- 0.0532 -- -- -- -- --
34.1 0.273 9.19 -- 0.347 -- -- -- 0.0119 10.2 -- -- -- --
35.01 0.276 9.21 -- -- -0.98 -- -- -0.018 -- 14.83 3293 -- --
41.41 0.3 9.2 -- -- -- -- -- 0.0117 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 21.46 humidity 50.0 270 > th dose dependent rect. 7 7
3 21.50 atmosphere 995.0 30 > th dose dependent rect. 8 21
8 22.02 temperature 10.0 30 > th dose dependent rect. 5 3
15 22.18 atmosphere 1010.0 90 < th dose independent rect. 5 2
17 22.19 atmosphere 995.0 30 > th dose independent rect. 8 21
18 22.19 humidity 50.0 30 > th dose dependent rect. 8 21
23 22.26 precipitation 0.1 30 < th dose independent rect. 5 3
24 22.26 precipitation 0.1 30 < th dose dependent rect. 5 3
25 22.27 wind 9.0 30 < th dose independent rect. 5 3
26 22.27 temperature 10.0 30 > th dose independent rect. 5 3
28 22.27 temperature 30.0 30 < th dose independent rect. 5 3
29 22.27 humidity 50.0 30 > th dose independent rect. 5 3
31 22.27 atmosphere 995.0 30 > th dose independent rect. 5 3
33 22.27 temperature 10.0 30 > th dose independent rect. 8 21
35 22.28 radiation 40.0 30 < th dose independent rect. 5 3
36 22.29 atmosphere 1015.0 90 < th dose dependent rect. 5 2
37 22.29 humidity 50.0 270 > th dose dependent rect. 7 19
53 22.34 temperature 15.0 270 > th dose independent rect. 3 14
55 22.34 wind 9.0 30 < th dose dependent rect. 5 3
60 22.40 wind 9.0 30 < th dose independent rect. 8 21
63 22.46 wind 3.0 90 < th dose dependent rect. 5 2
72 22.53 precipitation 0.1 10 < th dose independent rect. 8 21
75 22.53 precipitation 0.1 10 < th dose dependent rect. 8 21
85 22.57 radiation 1.0 30 > th dose independent sin 11 NA
87 22.59 wind 9.0 270 < th dose independent rect. 7 20
88 22.60 radiation 1.0 30 > th dose independent rect. 5 3
99 22.61 wind 9.0 270 < th dose independent rect. 6 22
100 22.61 radiation 10.0 10 < th dose dependent sin 11 NA
105 22.63 temperature 20.0 30 > th dose independent rect. 5 13
119 22.66 radiation 40.0 90 < th dose dependent rect. 5 3
120 22.67 atmosphere 1010.0 270 < th dose independent rect. 3 4
123 22.69 temperature 10.0 270 > th dose dependent rect. 4 2
131 22.71 wind 9.0 270 < th dose dependent rect. 3 4
156 22.76 precipitation 0.1 270 < th dose independent rect. 3 4
158 22.76 precipitation 0.1 270 < th dose dependent rect. 3 4
159 22.77 radiation 20.0 270 < th dose independent rect. 3 4
167 22.79 wind 9.0 270 < th dose independent rect. 3 4
168 22.79 temperature 10.0 270 > th dose independent rect. 3 4
170 22.79 temperature 30.0 270 < th dose independent rect. 3 4
171 22.79 humidity 50.0 270 > th dose independent rect. 3 4
173 22.79 atmosphere 995.0 270 > th dose independent rect. 3 4
178 22.79 temperature 10.0 270 > th dose independent rect. 7 20
185 22.80 humidity 50.0 30 > th dose dependent rect. 5 3
187 22.80 radiation 40.0 270 < th dose dependent rect. 3 4
253 22.87 wind 1.0 90 > th dose independent rect. 8 21
255 22.87 temperature 10.0 270 > th dose dependent rect. 3 4
278 22.90 radiation 40.0 270 < th dose independent rect. 7 20
298 22.92 humidity 50.0 270 > th dose independent rect. 14 17
315 22.95 humidity 50.0 270 > th dose dependent rect. 3 4
316 22.96 radiation 1.0 30 < th dose independent sin 11 NA
317 22.96 temperature 20.0 30 > th dose independent rect. 5 15
330 22.99 wind 3.0 270 < th dose independent rect. 3 4
334 23.00 atmosphere 1015.0 10 < th dose dependent rect. 5 3
395 23.12 humidity 50.0 30 > th dose independent rect. 8 21
403 23.14 precipitation 0.1 270 < th dose independent rect. 7 20
404 23.14 atmosphere 1015.0 30 < th dose independent rect. 8 21
408 23.14 precipitation 0.1 270 < th dose dependent rect. 7 20
419 23.15 atmosphere 995.0 30 > th dose dependent rect. 5 3
428 23.17 radiation 40.0 270 < th dose independent rect. 7 6
459 23.21 temperature 15.0 720 > th dose independent rect. 19 12
489 23.24 humidity 70.0 270 > th dose independent rect. 7 6
512 23.26 temperature 15.0 4320 > th dose independent rect. 7 2
521 23.27 atmosphere 1015.0 270 < th dose dependent rect. 3 3
551 23.33 wind 1.0 10 > th dose independent rect. 5 3
553 23.33 wind 7.0 270 < th dose independent rect. 17 10
582 23.37 temperature 15.0 270 > th dose independent rect. 13 18
586 23.39 humidity 50.0 270 > th dose independent rect. 3 15
638 23.45 temperature 15.0 720 > th dose independent rect. 19 21
647 23.47 wind 9.0 4320 < th dose independent rect. 6 3
650 23.47 temperature 30.0 270 < th dose independent rect. 7 6
719 23.60 wind 1.0 270 > th dose independent rect. 7 6
726 23.61 temperature 10.0 43200 > th dose independent rect. 9 7
742 23.63 precipitation 0.1 270 < th dose independent rect. 13 18
744 23.63 humidity 70.0 270 > th dose independent rect. 7 19
746 23.63 temperature 15.0 270 > th dose independent rect. 11 21
748 23.63 precipitation 0.1 270 < th dose dependent rect. 13 18
753 23.64 humidity 50.0 1440 > th dose independent rect. 6 3
755 23.64 atmosphere 995.0 1440 > th dose independent rect. 6 3
756 23.64 atmosphere 1015.0 1440 < th dose independent rect. 6 3
760 23.64 temperature 10.0 1440 > th dose independent rect. 9 21
767 23.65 temperature 10.0 270 > th dose independent rect. 7 6
768 23.65 atmosphere 995.0 270 > th dose independent rect. 7 6
769 23.65 atmosphere 1015.0 270 < th dose independent rect. 7 6
770 23.65 temperature 20.0 30 > th dose independent rect. 5 18
772 23.65 radiation 1.0 10 > th dose dependent rect. 18 13
836 23.71 temperature 30.0 30 < th dose dependent rect. 9 20
849 23.73 radiation 1.0 10 > th dose dependent rect. 5 2
863 23.74 precipitation 0.1 270 < th dose independent rect. 7 6
864 23.74 radiation 40.0 30 < th dose independent rect. 8 21
867 23.74 precipitation 0.1 270 < th dose dependent rect. 7 6
894 23.77 radiation 1.0 30 > th dose independent rect. 15 17
927 23.81 precipitation 0.1 270 < th dose independent rect. 3 14
931 23.81 precipitation 0.1 270 < th dose dependent rect. 3 14
935 23.82 wind 9.0 270 < th dose independent rect. 7 6
936 23.82 temperature 15.0 1440 > th dose independent rect. 9 7
961 23.85 temperature 15.0 4320 > th dose independent rect. 10 3
970 23.86 atmosphere 995.0 270 > th dose independent rect. 17 10
975 23.86 radiation 40.0 270 < th dose dependent rect. 7 19
985 23.87 atmosphere 995.0 30 > th dose dependent rect. 18 11