Os01g0639200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : NAD-dependent epimerase/dehydratase family protein.
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Os01g0639200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : NAD-dependent epimerase/dehydratase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 212.17 | 0.684 | 10.3 | -1.3 | 2.19 | 1.39 | 1.29 | 0.631 | -0.392 | 8.16 | 68.4 | 1208 | -- | -- |
| 212.88 | 0.68 | 10.3 | -1.37 | 2.18 | 1.43 | 1.21 | -- | -0.408 | 8.14 | 68.56 | 1218 | -- | -- |
| 217 | 0.686 | 10.3 | -1.28 | 2.17 | 1.39 | -- | 0.407 | -0.396 | 8.13 | 68.58 | 1221 | -- | -- |
| 217.3 | 0.687 | 10.3 | -1.33 | 2.18 | 1.41 | -- | -- | -0.41 | 8.13 | 68.55 | 1220 | -- | -- |
| 450.88 | 0.989 | 10.4 | -1.2 | -- | 1.32 | -- | 0.641 | -0.457 | -- | 70 | 1390 | -- | -- |
| 286.82 | 0.794 | 10.3 | -1.07 | 2.09 | -- | 1.1 | -- | -0.407 | 7.53 | -- | -- | -- | -- |
| 290.21 | 0.798 | 10.3 | -1.04 | 2.09 | -- | -- | -- | -0.408 | 7.54 | -- | -- | -- | -- |
| 451.29 | 0.989 | 10.4 | -1.32 | -- | 1.35 | -- | -- | -0.491 | -- | 69.24 | 1386 | -- | -- |
| 262.56 | 0.755 | 10.3 | -- | 2.13 | 1.27 | -- | -- | -0.207 | 8.11 | 67 | 1228 | -- | -- |
| 524.13 | 1.07 | 10.4 | -1.01 | -- | -- | -- | -- | -0.376 | -- | -- | -- | -- | -- |
| 318.7 | 0.835 | 10.3 | -- | 2.08 | -- | -- | -- | -0.292 | 7.57 | -- | -- | -- | -- |
| 495.58 | 1.04 | 10.4 | -- | -- | 1.15 | -- | -- | -0.333 | -- | 69.6 | 1390 | -- | -- |
| 550.98 | 1.1 | 10.3 | -- | -- | -- | -- | -- | -0.264 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 211.33 | humidity | 70 | 1440 | > th | dose independent | rect. | 18 | 19 |
| 2 | 212.25 | humidity | 70 | 1440 | < th | dose independent | rect. | 17 | 20 |
| 6 | 213.12 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 4 |
| 14 | 214.86 | humidity | 70 | 1440 | < th | dose independent | rect. | 9 | 4 |
| 15 | 214.88 | humidity | 80 | 1440 | < th | dose dependent | sin | 7 | NA |
| 20 | 215.42 | humidity | 80 | 1440 | < th | dose dependent | rect. | 20 | 17 |
| 22 | 215.56 | humidity | 90 | 1440 | < th | dose dependent | rect. | 3 | 11 |
| 29 | 215.97 | humidity | 80 | 1440 | < th | dose dependent | rect. | 24 | 13 |
| 50 | 216.70 | humidity | 70 | 1440 | > th | dose independent | rect. | 24 | 13 |
| 51 | 216.71 | humidity | 70 | 1440 | > th | dose independent | rect. | 2 | 11 |
| 72 | 217.09 | humidity | 80 | 1440 | < th | dose independent | rect. | 6 | 8 |
| 93 | 217.52 | humidity | 70 | 1440 | > th | dose independent | sin | 9 | NA |
| 98 | 217.74 | humidity | 70 | 1440 | < th | dose independent | sin | 9 | NA |
| 152 | 218.80 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 3 |
| 167 | 218.85 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 169 | 218.86 | radiation | 20 | 4320 | > th | dose dependent | rect. | 6 | 2 |
| 207 | 219.30 | humidity | 50 | 1440 | > th | dose dependent | rect. | 5 | 9 |
| 220 | 219.67 | humidity | 50 | 1440 | > th | dose dependent | rect. | 7 | 7 |
| 374 | 221.20 | humidity | 80 | 1440 | < th | dose dependent | rect. | 23 | 23 |
| 380 | 221.25 | humidity | 80 | 1440 | < th | dose dependent | no | NA | NA |
| 386 | 221.26 | humidity | 80 | 1440 | < th | dose dependent | rect. | 5 | 23 |
| 388 | 221.27 | humidity | 50 | 1440 | > th | dose dependent | sin | 3 | NA |
| 576 | 222.50 | humidity | 70 | 1440 | < th | dose independent | rect. | 9 | 23 |
| 585 | 222.57 | humidity | 70 | 1440 | < th | dose independent | rect. | 9 | 11 |
| 609 | 222.73 | humidity | 70 | 1440 | < th | dose independent | no | NA | NA |
| 610 | 222.73 | humidity | 70 | 1440 | < th | dose independent | rect. | 6 | 14 |
| 704 | 222.98 | humidity | 80 | 1440 | < th | dose dependent | rect. | 11 | 23 |
| 752 | 223.58 | radiation | 20 | 4320 | > th | dose independent | rect. | 6 | 2 |
| 767 | 223.59 | humidity | 70 | 1440 | > th | dose independent | rect. | 8 | 23 |
| 770 | 223.60 | humidity | 70 | 1440 | > th | dose independent | rect. | 8 | 19 |
| 771 | 223.61 | humidity | 70 | 1440 | > th | dose independent | rect. | 8 | 12 |
| 776 | 223.62 | humidity | 70 | 1440 | > th | dose independent | rect. | 8 | 17 |
| 788 | 223.68 | humidity | 70 | 1440 | > th | dose independent | rect. | 24 | 20 |
| 790 | 223.69 | humidity | 70 | 1440 | > th | dose independent | rect. | 2 | 18 |
| 791 | 223.69 | humidity | 70 | 1440 | > th | dose independent | rect. | 6 | 21 |
| 796 | 223.70 | humidity | 70 | 1440 | > th | dose independent | rect. | 6 | 14 |
| 802 | 223.70 | humidity | 70 | 1440 | > th | dose independent | rect. | 2 | 23 |
| 808 | 223.71 | humidity | 70 | 1440 | > th | dose independent | no | NA | NA |
| 813 | 223.71 | humidity | 70 | 1440 | > th | dose independent | rect. | 6 | 19 |
| 956 | 224.57 | humidity | 60 | 1440 | > th | dose dependent | rect. | 11 | 1 |