Os01g0633500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to NADPH-dependent reductase A1 (Fragment).
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Os01g0633500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to NADPH-dependent reductase A1 (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 101.69 | 0.474 | 7.07 | 0.504 | 1.49 | -0.748 | -0.022 | -0.407 | -0.343 | 8.13 | 21.4 | 761 | -- | -- |
| 100.86 | 0.468 | 7.05 | 0.555 | 1.5 | -0.661 | 0.152 | -- | -0.293 | 8.1 | 22.2 | 759 | -- | -- |
| 100.73 | 0.467 | 7.06 | 0.476 | 1.53 | -0.659 | -- | -0.281 | -0.303 | 8.11 | 22.2 | 741 | -- | -- |
| 100.93 | 0.468 | 7.05 | 0.558 | 1.5 | -0.66 | -- | -- | -0.298 | 8.11 | 22.22 | 761 | -- | -- |
| 195.77 | 0.652 | 7.03 | 0.772 | -- | -1.16 | -- | 0.224 | -0.0369 | -- | 25.01 | 588 | -- | -- |
| 120.26 | 0.514 | 7.1 | 0.342 | 1.62 | -- | 0.131 | -- | -0.519 | 8.26 | -- | -- | -- | -- |
| 120.32 | 0.514 | 7.1 | 0.346 | 1.62 | -- | -- | -- | -0.519 | 8.26 | -- | -- | -- | -- |
| 196.12 | 0.652 | 7.04 | 0.699 | -- | -1.15 | -- | -- | -0.0542 | -- | 25.01 | 593 | -- | -- |
| 108.58 | 0.485 | 7.07 | -- | 1.52 | -0.551 | -- | -- | -0.388 | 8.11 | 22.36 | 757 | -- | -- |
| 265.23 | 0.761 | 7.14 | 0.357 | -- | -- | -- | -- | -0.501 | -- | -- | -- | -- | -- |
| 123.47 | 0.52 | 7.11 | -- | 1.62 | -- | -- | -- | -0.558 | 8.24 | -- | -- | -- | -- |
| 208.3 | 0.672 | 7.07 | -- | -- | -1.06 | -- | -- | -0.162 | -- | 25 | 590 | -- | -- |
| 268.6 | 0.765 | 7.15 | -- | -- | -- | -- | -- | -0.541 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 97.54 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 3 | 98.99 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 21 | 2 |
| 7 | 99.49 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 9 | 99.73 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 12 | 99.79 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 13 | 99.79 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 14 | 99.83 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 20 | 6 |
| 15 | 99.84 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 20 | 3 |
| 16 | 99.84 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 20 | 3 |
| 17 | 99.86 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 21 | 12 |
| 18 | 99.92 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 20 | 3 |
| 26 | 100.33 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 30 | 100.46 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 1 | 15 |
| 32 | 100.49 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 45 | 100.69 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 1 | 11 |
| 46 | 100.69 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 24 | 22 |
| 58 | 100.79 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 70 | 100.86 | temperature | 10.0 | 270 | > th | dose dependent | sin | 8 | NA |
| 77 | 100.90 | temperature | 20.0 | 270 | > th | dose independent | rect. | 19 | 14 |
| 78 | 100.91 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 1 | 4 |
| 81 | 100.93 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 1 | 3 |
| 95 | 101.02 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 22 | 7 |
| 97 | 101.03 | temperature | 20.0 | 270 | > th | dose independent | rect. | 3 | 22 |
| 118 | 101.18 | wind | 5.0 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 120 | 101.18 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 10 |
| 125 | 101.21 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 24 | 19 |
| 137 | 101.31 | temperature | 20.0 | 720 | > th | dose independent | rect. | 21 | 10 |
| 168 | 101.47 | temperature | 15.0 | 30 | > th | dose dependent | sin | 6 | NA |
| 169 | 101.48 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 17 | 14 |
| 179 | 101.53 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 19 | 12 |
| 185 | 101.55 | wind | 5.0 | 4320 | > th | dose independent | rect. | 20 | 5 |
| 189 | 101.56 | temperature | 25.0 | 720 | < th | dose dependent | sin | 11 | NA |
| 195 | 101.58 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 20 | 10 |
| 201 | 101.63 | temperature | 30.0 | 270 | < th | dose dependent | sin | 8 | NA |
| 209 | 101.67 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 21 | 8 |
| 212 | 101.68 | wind | 5.0 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 254 | 101.86 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 4 | 9 |
| 288 | 102.02 | wind | 5.0 | 4320 | < th | dose independent | rect. | 20 | 5 |
| 332 | 102.13 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 6 | 2 |
| 335 | 102.13 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 1 | 12 |
| 352 | 102.19 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 6 | 2 |
| 359 | 102.21 | temperature | 20.0 | 720 | > th | dose independent | sin | 11 | NA |
| 385 | 102.30 | temperature | 20.0 | 720 | < th | dose independent | rect. | 19 | 12 |
| 399 | 102.34 | temperature | 20.0 | 720 | > th | dose independent | rect. | 15 | 18 |
| 402 | 102.35 | wind | 3.0 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 410 | 102.37 | wind | 9.0 | 14400 | < th | dose independent | rect. | 1 | 12 |
| 429 | 102.42 | temperature | 20.0 | 720 | > th | dose independent | rect. | 15 | 16 |
| 440 | 102.46 | wind | 9.0 | 14400 | > th | dose independent | rect. | 1 | 12 |
| 447 | 102.48 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 451 | 102.49 | wind | 9.0 | 14400 | > th | dose independent | rect. | 4 | 9 |
| 457 | 102.50 | temperature | 20.0 | 720 | > th | dose independent | rect. | 13 | 20 |
| 465 | 102.55 | temperature | 20.0 | 720 | > th | dose independent | rect. | 13 | 18 |
| 510 | 102.64 | temperature | 20.0 | 270 | < th | dose independent | rect. | 24 | 22 |
| 517 | 102.69 | temperature | 20.0 | 270 | > th | dose independent | sin | 8 | NA |
| 520 | 102.69 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 21 | 6 |
| 540 | 102.76 | temperature | 20.0 | 720 | > th | dose independent | rect. | 21 | 6 |
| 569 | 102.82 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 1 | 2 |
| 583 | 102.88 | temperature | 20.0 | 720 | < th | dose independent | sin | 10 | NA |
| 615 | 102.97 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 616 | 102.97 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 650 | 103.04 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 717 | 103.21 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 721 | 103.21 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 738 | 103.25 | temperature | 20.0 | 270 | < th | dose independent | sin | 7 | NA |
| 775 | 103.33 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 17 | 2 |
| 778 | 103.34 | temperature | 20.0 | 90 | < th | dose independent | rect. | 24 | 12 |
| 792 | 103.39 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 10 | 20 |
| 807 | 103.42 | temperature | 20.0 | 720 | > th | dose independent | rect. | 19 | 21 |
| 861 | 103.53 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 22 | 14 |
| 892 | 103.59 | atmosphere | 1005.0 | 14400 | < th | dose independent | sin | 11 | NA |
| 963 | 103.69 | atmosphere | 1005.0 | 43200 | < th | dose independent | sin | 9 | NA |
| 998 | 103.73 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 13 |