Os01g0632700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0632700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 76.55 | 0.411 | 5.53 | 0.19 | 0.257 | -1.08 | 0.113 | -0.78 | -0.0203 | 10.8 | 22.6 | 2244 | -- | -- |
| 77.9 | 0.411 | 5.54 | -0.058 | 0.255 | -1.07 | -0.0511 | -- | -0.0553 | 10.3 | 22.5 | 2193 | -- | -- |
| 76.43 | 0.407 | 5.53 | 0.189 | 0.25 | -1.09 | -- | -0.784 | -0.0157 | 10.7 | 22.5 | 2212 | -- | -- |
| 77.78 | 0.411 | 5.56 | -0.0895 | 0.253 | -1.09 | -- | -- | -0.0872 | 10.7 | 22.48 | 2233 | -- | -- |
| 79.39 | 0.415 | 5.53 | 0.206 | -- | -1.06 | -- | -0.784 | 0.00794 | -- | 22.38 | 1898 | -- | -- |
| 122.5 | 0.519 | 5.47 | 0.345 | 0.152 | -- | -0.0208 | -- | 0.316 | 10.1 | -- | -- | -- | -- |
| 122.5 | 0.518 | 5.47 | 0.344 | 0.152 | -- | -- | -- | 0.316 | 10.1 | -- | -- | -- | -- |
| 80.8 | 0.419 | 5.56 | -0.057 | -- | -1.05 | -- | -- | -0.0572 | -- | 22.5 | 1897 | -- | -- |
| 77.96 | 0.411 | 5.55 | -- | 0.247 | -1.07 | -- | -- | -0.0683 | 10.7 | 22.5 | 2204 | -- | -- |
| 123.9 | 0.52 | 5.47 | 0.342 | -- | -- | -- | -- | 0.315 | -- | -- | -- | -- | -- |
| 125.61 | 0.524 | 5.48 | -- | 0.151 | -- | -- | -- | 0.277 | 9.98 | -- | -- | -- | -- |
| 80.88 | 0.419 | 5.55 | -- | -- | -1.03 | -- | -- | -0.0503 | -- | 22.43 | 1893 | -- | -- |
| 126.98 | 0.526 | 5.48 | -- | -- | -- | -- | -- | 0.277 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 79.81 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 11 |
| 6 | 80.01 | temperature | 25 | 1440 | < th | dose dependent | sin | 5 | NA |
| 13 | 80.08 | temperature | 25 | 1440 | < th | dose dependent | rect. | 15 | 21 |
| 23 | 80.18 | temperature | 30 | 1440 | < th | dose dependent | rect. | 4 | 2 |
| 24 | 80.18 | temperature | 25 | 1440 | < th | dose dependent | rect. | 24 | 18 |
| 32 | 80.19 | temperature | 25 | 1440 | < th | dose dependent | rect. | 24 | 21 |
| 109 | 80.35 | temperature | 25 | 1440 | < th | dose dependent | rect. | 8 | 23 |
| 121 | 80.38 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 128 | 80.38 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 23 |
| 144 | 80.43 | temperature | 15 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 163 | 80.49 | temperature | 25 | 1440 | < th | dose dependent | rect. | 11 | 23 |
| 266 | 81.05 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 18 |
| 434 | 81.97 | temperature | 15 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 511 | 82.33 | temperature | 15 | 1440 | > th | dose dependent | sin | 9 | NA |
| 549 | 82.48 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 696 | 82.85 | temperature | 10 | 270 | > th | dose dependent | rect. | 2 | 23 |
| 776 | 83.03 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 23 |