Os01g0631900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Senescence-associated protein 4.
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Os01g0631900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Senescence-associated protein 4.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 213.64 | 0.687 | 3.16 | -0.484 | 0.0518 | -0.447 | -0.656 | 1.66 | 0.022 | 16.5 | 992.4 | 5190 | -- | -- |
| 216.21 | 0.685 | 3.14 | -0.304 | 0.0508 | -0.375 | -0.571 | -- | 0.0384 | 16.4 | 991.2 | 7863 | -- | -- |
| 214.79 | 0.683 | 3.17 | -0.487 | 0.0478 | -0.449 | -- | 1.62 | 0.0176 | 16.5 | 992.3 | 5209 | -- | -- |
| 217.1 | 0.686 | 3.14 | -0.31 | 0.0477 | -0.378 | -- | -- | 0.0351 | 16.4 | 991.5 | 7876 | -- | -- |
| 214.91 | 0.683 | 3.17 | -0.486 | -- | -0.445 | -- | 1.61 | 0.0174 | -- | 991.8 | 5216 | -- | -- |
| 219.2 | 0.694 | 3.14 | -0.205 | 0.0464 | -- | -0.583 | -- | 0.0389 | 16.2 | -- | -- | -- | -- |
| 220.16 | 0.695 | 3.14 | -0.211 | 0.0433 | -- | -- | -- | 0.0357 | 16.5 | -- | -- | -- | -- |
| 217.22 | 0.686 | 3.14 | -0.312 | -- | -0.378 | -- | -- | 0.0339 | -- | 991.2 | 7857 | -- | -- |
| 219.44 | 0.69 | 3.13 | -- | 0.0523 | -0.286 | -- | -- | 0.0673 | 16.2 | 992.1 | 7882 | -- | -- |
| 220.26 | 0.693 | 3.14 | -0.213 | -- | -- | -- | -- | 0.0346 | -- | -- | -- | -- | -- |
| 221.33 | 0.696 | 3.14 | -- | 0.0473 | -- | -- | -- | 0.0592 | 16.4 | -- | -- | -- | -- |
| 219.59 | 0.69 | 3.13 | -- | -- | -0.284 | -- | -- | 0.0659 | -- | 991.6 | 7860 | -- | -- |
| 221.45 | 0.695 | 3.14 | -- | -- | -- | -- | -- | 0.0582 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 209.13 | wind | 3.0 | 90 | > th | dose dependent | rect. | 22 | 2 |
| 6 | 210.09 | wind | 5.0 | 90 | > th | dose independent | rect. | 22 | 1 |
| 7 | 210.16 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 23 | 1 |
| 9 | 210.37 | wind | 3.0 | 10 | > th | dose independent | rect. | 23 | 1 |
| 15 | 210.84 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 18 | 14 |
| 16 | 210.84 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 16 | 11 |
| 18 | 210.88 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 16 | 16 |
| 19 | 210.90 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 18 | 10 |
| 23 | 210.92 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 18 | 9 |
| 26 | 210.92 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 17 | 8 |
| 31 | 210.95 | atmosphere | 995.0 | 43200 | < th | dose independent | sin | 11 | NA |
| 35 | 210.97 | wind | 9.0 | 4320 | < th | dose independent | rect. | 22 | 1 |
| 38 | 210.98 | atmosphere | 995.0 | 43200 | > th | dose independent | sin | 11 | NA |
| 39 | 210.98 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 18 | 14 |
| 44 | 211.03 | wind | 7.0 | 1440 | > th | dose independent | rect. | 2 | 1 |
| 49 | 211.03 | wind | 7.0 | 1440 | > th | dose dependent | rect. | 2 | 1 |
| 67 | 211.15 | wind | 1.0 | 10 | < th | dose dependent | rect. | 24 | 2 |
| 71 | 211.22 | wind | 9.0 | 270 | > th | dose independent | rect. | 22 | 4 |
| 80 | 211.22 | wind | 9.0 | 270 | > th | dose dependent | rect. | 22 | 4 |
| 90 | 211.24 | wind | 1.0 | 14400 | < th | dose independent | rect. | 1 | 2 |
| 95 | 211.27 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 18 | 5 |
| 97 | 211.31 | humidity | 90.0 | 90 | < th | dose independent | rect. | 23 | 1 |
| 100 | 211.34 | atmosphere | 995.0 | 43200 | < th | dose dependent | sin | 13 | NA |
| 133 | 211.43 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 2 | 1 |
| 137 | 211.45 | wind | 9.0 | 1440 | > th | dose independent | rect. | 22 | 1 |
| 141 | 211.45 | wind | 9.0 | 1440 | > th | dose dependent | rect. | 22 | 1 |
| 147 | 211.46 | humidity | 90.0 | 10 | < th | dose independent | rect. | 23 | 1 |
| 211 | 211.59 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 216 | 211.61 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 226 | 211.64 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 253 | 211.64 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 1 | 1 |
| 254 | 211.64 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 282 | 211.65 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 24 | 2 |
| 288 | 211.65 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 24 | 2 |
| 299 | 211.66 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 22 | 8 |
| 322 | 211.67 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 22 | 6 |
| 385 | 211.71 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 20 | 3 |
| 417 | 211.77 | temperature | 25.0 | 10 | > th | dose independent | rect. | 5 | 1 |
| 439 | 211.82 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 2 | 1 |
| 447 | 211.85 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 453 | 211.85 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 24 | 2 |
| 460 | 211.85 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 466 | 211.85 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 24 | 2 |
| 474 | 211.86 | wind | 1.0 | 14400 | > th | dose independent | rect. | 1 | 2 |
| 514 | 212.17 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 7 | 4 |
| 535 | 212.24 | wind | 9.0 | 720 | < th | dose independent | rect. | 2 | 16 |
| 543 | 212.33 | wind | 5.0 | 270 | > th | dose dependent | rect. | 20 | 5 |
| 559 | 212.37 | wind | 1.0 | 10 | < th | dose dependent | rect. | 11 | 15 |
| 561 | 212.38 | wind | 1.0 | 10 | < th | dose independent | rect. | 24 | 2 |
| 591 | 212.46 | wind | 3.0 | 10 | > th | dose independent | rect. | 23 | 6 |
| 604 | 212.50 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 22 | 1 |
| 645 | 212.59 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 20 | 3 |
| 663 | 212.62 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 20 | 1 |
| 695 | 212.69 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 2 | 1 |
| 743 | 212.78 | wind | 9.0 | 720 | < th | dose independent | rect. | 6 | 8 |
| 747 | 212.80 | temperature | 25.0 | 90 | < th | dose independent | rect. | 20 | 1 |
| 752 | 212.81 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 5 | 1 |
| 768 | 212.85 | wind | 1.0 | 270 | < th | dose dependent | rect. | 22 | 1 |
| 844 | 212.93 | temperature | 15.0 | 720 | > th | dose independent | rect. | 14 | 16 |
| 869 | 212.96 | wind | 3.0 | 90 | > th | dose dependent | rect. | 22 | 5 |
| 952 | 213.12 | atmosphere | 1000.0 | 30 | > th | dose dependent | rect. | 15 | 8 |
| 964 | 213.15 | wind | 5.0 | 90 | < th | dose independent | rect. | 12 | 22 |
| 984 | 213.18 | temperature | 30.0 | 90 | > th | dose independent | rect. | 10 | 1 |
| 987 | 213.19 | atmosphere | 1000.0 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 999 | 213.20 | wind | 1.0 | 270 | < th | dose independent | rect. | 22 | 1 |
| 1000 | 213.20 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 8 | 1 |