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Os01g0631800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.91 (0.0465) R2 : 0.161
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -1.05 (0.113) R2dE : 0.172 R2E : 0.157
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.125 (0.101) R2dN8 : 0.00394 R2N8 : -0.0106
σ : 0.863
deviance : 343.57
__
_____
C
peak time of C : --
E
wheather : temperature
threshold : 25.9
memory length : 487
response mode : > th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
323.87 0.846 6.9 -0.746 0.414 -0.733 -1.13 -0.497 0.0739 8.9 25.04 98 -- --
321.61 0.842 6.91 -0.617 0.578 -0.765 -1.06 -- -0.0164 9.98 25.91 72 -- --
323.35 0.844 6.94 -0.869 0.564 -0.743 -- -0.929 -0.0848 10.1 25.8 65 -- --
325.42 0.84 6.9 -0.569 0.503 -0.838 -- -- 0.0471 10.5 25.9 58 -- --
335.39 0.853 6.95 -0.836 -- -0.734 -- -0.847 -0.0545 -- 25.89 100 -- --
362.48 0.893 6.97 -0.841 0.703 -- -0.783 -- -0.261 6.44 -- -- -- --
363.71 0.893 6.97 -0.853 0.705 -- -- -- -0.26 6.07 -- -- -- --
335.31 0.853 6.91 -0.612 -- -0.873 -- -- 0.071 -- 25.73 306 -- --
334.03 0.851 6.89 -- 0.528 -0.93 -- -- 0.129 11.1 25.98 60 -- --
389.44 0.922 6.98 -0.833 -- -- -- -- -0.244 -- -- -- -- --
382.91 0.915 6.95 -- 0.692 -- -- -- -0.164 6.13 -- -- -- --
343.57 0.863 6.91 -- -- -1.05 -- -- 0.125 -- 25.9 487 -- --
407.76 0.943 6.96 -- -- -- -- -- -0.151 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 314.81 temperature 25 30 > th dose independent rect. 8 14
13 316.85 temperature 25 90 > th dose independent sin 21 NA
14 318.09 temperature 25 90 < th dose independent sin 20 NA
18 319.02 temperature 25 90 > th dose independent rect. 7 23
19 319.10 temperature 25 10 > th dose independent rect. 8 21
25 319.49 temperature 25 90 > th dose independent rect. 2 19
26 319.54 temperature 25 270 < th dose independent rect. 10 10
31 319.76 temperature 25 90 < th dose independent rect. 5 22
50 320.48 temperature 10 90 > th dose dependent rect. 7 23
56 320.67 temperature 20 30 > th dose dependent rect. 8 22
61 321.00 temperature 25 90 < th dose independent rect. 5 18
65 321.15 temperature 10 720 > th dose dependent rect. 8 11
66 321.15 temperature 30 30 < th dose dependent rect. 5 23
85 321.54 temperature 10 720 > th dose dependent rect. 7 13
114 322.28 temperature 25 90 < th dose independent rect. 5 16
133 322.78 radiation 1 720 < th dose independent rect. 8 5
134 322.78 radiation 1 720 < th dose dependent rect. 8 5
149 323.07 temperature 30 90 < th dose dependent rect. 9 23
166 323.31 temperature 20 10 > th dose dependent rect. 8 14
171 323.39 temperature 25 10 < th dose dependent sin 21 NA
204 323.73 humidity 70 90 > th dose dependent rect. 5 22
209 323.80 temperature 25 720 > th dose independent rect. 4 15
220 323.91 temperature 30 30 < th dose dependent sin 19 NA
225 323.94 temperature 30 90 < th dose dependent rect. 11 23
234 324.04 temperature 30 30 < th dose dependent rect. 17 23
236 324.11 temperature 25 90 > th dose independent no NA NA
243 324.20 temperature 30 90 < th dose dependent rect. 23 23
266 324.48 radiation 1 720 > th dose independent rect. 7 8
267 324.52 humidity 70 720 > th dose independent rect. 17 15
277 324.60 temperature 30 90 < th dose dependent no NA NA
283 324.72 temperature 15 720 > th dose dependent sin 23 NA
321 325.08 temperature 25 90 < th dose independent rect. 23 23
342 325.30 temperature 25 90 > th dose independent rect. 13 23
352 325.36 temperature 30 270 < th dose dependent rect. 11 10
365 325.45 humidity 90 720 < th dose dependent rect. 8 11
372 325.59 temperature 30 720 < th dose dependent rect. 9 12
381 325.63 temperature 25 90 < th dose independent rect. 9 23
385 325.65 temperature 30 720 < th dose dependent rect. 9 10
386 325.65 temperature 20 90 > th dose dependent rect. 2 23
387 325.67 temperature 25 90 > th dose independent rect. 10 23
389 325.68 temperature 25 30 > th dose independent rect. 11 11
400 325.73 temperature 20 30 > th dose dependent rect. 23 23
420 325.83 temperature 30 30 < th dose dependent rect. 13 23
422 325.84 temperature 30 30 < th dose dependent rect. 15 23
427 325.87 temperature 25 90 < th dose independent no NA NA
430 325.89 humidity 90 10 < th dose dependent rect. 8 13
441 325.96 temperature 20 270 > th dose dependent rect. 15 23
444 325.99 humidity 90 270 < th dose dependent rect. 11 23
446 326.00 temperature 30 720 < th dose dependent rect. 7 15
475 326.15 temperature 30 720 < th dose dependent sin 22 NA
502 326.29 humidity 80 30 < th dose independent rect. 8 13
508 326.32 humidity 60 720 > th dose independent sin 11 NA
510 326.32 humidity 90 720 < th dose dependent rect. 11 8
544 326.51 temperature 20 90 > th dose dependent rect. 13 23
550 326.56 temperature 20 30 > th dose dependent rect. 3 19
557 326.62 humidity 60 720 > th dose independent rect. 9 22
580 326.72 temperature 20 90 > th dose dependent no NA NA
584 326.73 humidity 50 720 > th dose dependent rect. 9 14
588 326.76 temperature 25 90 > th dose independent rect. 18 23
593 326.78 humidity 60 720 > th dose independent rect. 14 8
604 326.82 temperature 25 270 < th dose independent rect. 1 22
610 326.83 temperature 30 30 < th dose dependent rect. 19 23
612 326.84 humidity 70 10 > th dose dependent sin 19 NA
630 326.90 temperature 20 30 > th dose dependent rect. 11 23
638 326.95 temperature 25 10 < th dose independent rect. 12 8
642 326.96 humidity 50 720 > th dose dependent rect. 11 10
654 327.00 temperature 25 90 < th dose independent rect. 21 23
663 327.04 humidity 90 270 < th dose dependent rect. 7 17
673 327.10 temperature 25 90 > th dose independent rect. 15 23
692 327.16 humidity 90 720 < th dose dependent sin 22 NA
718 327.26 temperature 20 90 > th dose dependent rect. 18 23
722 327.27 temperature 10 90 > th dose dependent no NA NA
752 327.36 humidity 90 10 < th dose dependent rect. 8 16
779 327.44 humidity 50 270 > th dose dependent rect. 2 23
781 327.45 humidity 60 720 > th dose independent rect. 6 17
804 327.54 temperature 25 90 < th dose independent rect. 19 23
833 327.64 humidity 90 720 < th dose dependent rect. 13 6
835 327.64 humidity 50 720 > th dose dependent rect. 9 22
842 327.68 temperature 25 270 < th dose independent rect. 3 18
843 327.68 humidity 60 720 > th dose independent rect. 5 19
870 327.73 temperature 25 90 < th dose independent rect. 15 23
871 327.73 humidity 50 720 > th dose dependent rect. 11 7
873 327.74 radiation 1 720 < th dose independent sin 23 NA
905 327.84 radiation 1 720 < th dose independent rect. 6 17
906 327.84 temperature 25 90 < th dose independent rect. 13 23
907 327.84 humidity 80 720 < th dose dependent rect. 15 4
920 327.87 radiation 1 270 > th dose independent rect. 7 23
921 327.87 humidity 50 720 > th dose dependent sin 20 NA
925 327.88 humidity 60 720 > th dose independent rect. 14 21
926 327.88 humidity 80 720 < th dose dependent rect. 13 8
928 327.88 temperature 20 30 > th dose dependent rect. 21 23
948 327.95 humidity 60 720 > th dose independent sin 20 NA
953 327.96 temperature 25 90 < th dose independent rect. 17 23
956 327.97 humidity 90 720 < th dose dependent rect. 22 21
962 327.99 humidity 60 720 > th dose independent rect. 9 14