Os01g0631500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Beta-1,3-glucanase-like protein.
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Os01g0631500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Beta-1,3-glucanase-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 146.48 | 0.569 | 6.71 | -1.33 | 1.55 | -0.584 | 0.92 | -0.152 | -0.394 | 5.74 | 20.6 | 30 | -- | -- |
| 146.59 | 0.564 | 6.71 | -1.35 | 1.55 | -0.575 | 0.864 | -- | -0.4 | 5.76 | 20.6 | 28 | -- | -- |
| 148.41 | 0.567 | 6.71 | -1.34 | 1.56 | -0.562 | -- | -0.0104 | -0.4 | 5.82 | 20.6 | 32 | -- | -- |
| 148.2 | 0.567 | 6.71 | -1.36 | 1.56 | -0.561 | -- | -- | -0.405 | 5.8 | 20.9 | 46 | -- | -- |
| 272.24 | 0.773 | 6.73 | -1.28 | -- | -0.408 | -- | 0.125 | -0.339 | -- | 20.6 | 32 | -- | -- |
| 160.97 | 0.595 | 6.69 | -1.21 | 1.51 | -- | 0.684 | -- | -0.285 | 6.11 | -- | -- | -- | -- |
| 162.1 | 0.596 | 6.69 | -1.2 | 1.51 | -- | -- | -- | -0.287 | 6.15 | -- | -- | -- | -- |
| 272.32 | 0.772 | 6.73 | -1.26 | -- | -0.413 | -- | -- | -0.333 | -- | 20.64 | 39 | -- | -- |
| 194.31 | 0.653 | 6.67 | -- | 1.52 | -0.362 | -- | -- | -0.215 | 5.97 | 20.7 | 19 | -- | -- |
| 280.48 | 0.783 | 6.71 | -1.16 | -- | -- | -- | -- | -0.254 | -- | -- | -- | -- | -- |
| 200.28 | 0.662 | 6.66 | -- | 1.49 | -- | -- | -- | -0.153 | 6.19 | -- | -- | -- | -- |
| 312.79 | 0.826 | 6.69 | -- | -- | -0.257 | -- | -- | -0.168 | -- | 20.6 | 10 | -- | -- |
| 316.06 | 0.83 | 6.68 | -- | -- | -- | -- | -- | -0.125 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 135.64 | temperature | 20.0 | 90 | > th | dose independent | rect. | 4 | 19 |
| 2 | 137.35 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 17 | 15 |
| 3 | 138.22 | temperature | 20.0 | 90 | > th | dose independent | rect. | 18 | 15 |
| 6 | 138.44 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 19 | 14 |
| 9 | 138.56 | temperature | 20.0 | 270 | > th | dose independent | rect. | 15 | 7 |
| 15 | 139.47 | temperature | 20.0 | 30 | > th | dose independent | rect. | 4 | 21 |
| 23 | 139.92 | temperature | 20.0 | 270 | > th | dose independent | rect. | 17 | 4 |
| 31 | 140.50 | wind | 5.0 | 270 | < th | dose independent | rect. | 16 | 5 |
| 33 | 140.56 | temperature | 20.0 | 270 | > th | dose independent | rect. | 16 | 17 |
| 36 | 140.61 | temperature | 20.0 | 90 | > th | dose independent | rect. | 18 | 17 |
| 42 | 140.81 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 16 | 6 |
| 45 | 140.85 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 17 | 4 |
| 46 | 140.88 | wind | 7.0 | 270 | < th | dose dependent | rect. | 16 | 5 |
| 54 | 141.02 | temperature | 20.0 | 270 | > th | dose independent | rect. | 18 | 2 |
| 60 | 141.24 | wind | 9.0 | 14400 | < th | dose independent | rect. | 20 | 2 |
| 63 | 141.36 | wind | 9.0 | 270 | < th | dose dependent | rect. | 15 | 7 |
| 65 | 141.41 | wind | 1.0 | 270 | > th | dose independent | rect. | 22 | 18 |
| 67 | 141.43 | wind | 5.0 | 270 | < th | dose independent | rect. | 15 | 7 |
| 75 | 141.61 | temperature | 20.0 | 90 | > th | dose independent | rect. | 4 | 9 |
| 88 | 141.83 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 20 | 4 |
| 104 | 142.28 | wind | 7.0 | 270 | < th | dose dependent | rect. | 17 | 3 |
| 109 | 142.33 | wind | 9.0 | 14400 | < th | dose independent | rect. | 20 | 6 |
| 113 | 142.41 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 18 | 2 |
| 120 | 142.52 | wind | 9.0 | 14400 | > th | dose independent | rect. | 20 | 2 |
| 144 | 142.85 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 20 | 2 |
| 156 | 143.01 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 20 | 7 |
| 180 | 143.24 | wind | 9.0 | 270 | < th | dose dependent | rect. | 16 | 17 |
| 185 | 143.27 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 15 | 7 |
| 196 | 143.38 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 8 | 2 |
| 199 | 143.42 | wind | 7.0 | 14400 | > th | dose independent | rect. | 18 | 17 |
| 204 | 143.46 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 8 | 4 |
| 209 | 143.50 | wind | 7.0 | 14400 | < th | dose independent | rect. | 18 | 17 |
| 218 | 143.55 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 19 | 16 |
| 219 | 143.57 | wind | 9.0 | 14400 | > th | dose independent | rect. | 20 | 6 |
| 223 | 143.58 | wind | 9.0 | 14400 | < th | dose independent | rect. | 20 | 15 |
| 230 | 143.64 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 242 | 143.75 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 17 | 4 |
| 258 | 143.82 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 17 | 19 |
| 274 | 143.91 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 21 | 7 |
| 327 | 144.27 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 17 | 4 |
| 363 | 144.45 | temperature | 15.0 | 270 | > th | dose independent | rect. | 22 | 17 |
| 372 | 144.48 | wind | 9.0 | 270 | < th | dose independent | rect. | 22 | 17 |
| 376 | 144.49 | wind | 5.0 | 43200 | < th | dose independent | rect. | 17 | 6 |
| 391 | 144.57 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 15 | 7 |
| 393 | 144.57 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 15 | 7 |
| 400 | 144.58 | wind | 5.0 | 14400 | > th | dose independent | rect. | 18 | 21 |
| 411 | 144.62 | temperature | 10.0 | 270 | > th | dose independent | rect. | 15 | 7 |
| 412 | 144.62 | radiation | 40.0 | 270 | < th | dose independent | rect. | 15 | 7 |
| 423 | 144.65 | wind | 5.0 | 43200 | > th | dose independent | rect. | 17 | 6 |
| 431 | 144.67 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 18 | 2 |
| 447 | 144.74 | wind | 7.0 | 10 | < th | dose dependent | rect. | 18 | 5 |
| 455 | 144.76 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 6 | 4 |
| 473 | 144.80 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 22 | 17 |
| 488 | 144.85 | wind | 5.0 | 14400 | < th | dose independent | rect. | 20 | 20 |
| 507 | 144.90 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 16 | 10 |
| 513 | 144.92 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 16 | 6 |
| 545 | 145.01 | wind | 5.0 | 43200 | < th | dose independent | rect. | 16 | 12 |
| 573 | 145.13 | temperature | 15.0 | 270 | > th | dose independent | rect. | 21 | 19 |
| 584 | 145.15 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 22 | 17 |
| 591 | 145.15 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 22 | 17 |
| 603 | 145.21 | wind | 5.0 | 43200 | > th | dose independent | rect. | 16 | 12 |
| 616 | 145.24 | wind | 9.0 | 14400 | > th | dose independent | rect. | 17 | 9 |
| 622 | 145.26 | wind | 5.0 | 14400 | > th | dose dependent | sin | 11 | NA |
| 627 | 145.28 | wind | 9.0 | 14400 | > th | dose independent | rect. | 17 | 6 |
| 636 | 145.30 | wind | 9.0 | 14400 | > th | dose dependent | sin | 12 | NA |
| 648 | 145.33 | wind | 9.0 | 14400 | < th | dose independent | sin | 11 | NA |
| 665 | 145.36 | wind | 1.0 | 90 | > th | dose independent | rect. | 23 | 7 |
| 677 | 145.38 | wind | 9.0 | 270 | < th | dose independent | rect. | 21 | 19 |
| 707 | 145.44 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 17 | 7 |
| 714 | 145.47 | wind | 5.0 | 270 | < th | dose independent | rect. | 16 | 17 |
| 719 | 145.48 | wind | 7.0 | 14400 | < th | dose independent | rect. | 6 | 3 |
| 746 | 145.53 | wind | 7.0 | 14400 | > th | dose independent | sin | 11 | NA |
| 750 | 145.53 | temperature | 20.0 | 90 | > th | dose independent | rect. | 15 | 22 |
| 765 | 145.57 | temperature | 10.0 | 270 | > th | dose independent | rect. | 16 | 5 |
| 767 | 145.57 | radiation | 30.0 | 270 | < th | dose independent | rect. | 16 | 5 |
| 784 | 145.59 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 3 | 3 |
| 794 | 145.60 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 22 | 8 |
| 806 | 145.62 | wind | 5.0 | 14400 | > th | dose independent | sin | 4 | NA |
| 822 | 145.65 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 839 | 145.68 | wind | 1.0 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 840 | 145.68 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 3 | 4 |
| 843 | 145.69 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 850 | 145.70 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 8 | 4 |
| 854 | 145.71 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 18 | 2 |
| 860 | 145.72 | wind | 5.0 | 14400 | < th | dose independent | sin | 4 | NA |
| 861 | 145.72 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 878 | 145.75 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 22 | 8 |
| 942 | 145.82 | temperature | 25.0 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 967 | 145.86 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 22 | 8 |
| 973 | 145.86 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 22 | 8 |
| 997 | 145.89 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 16 | 5 |