Os01g0629000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0629000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 316.81 | 0.836 | 3.08 | 0.622 | 0.834 | -1.23 | 0.449 | -0.094 | 0.23 | 14 | 15.2 | 40 | -- | -- |
| 316.81 | 0.829 | 3.08 | 0.636 | 0.832 | -1.22 | 0.425 | -- | 0.232 | 14 | 15.3 | 43 | -- | -- |
| 317.32 | 0.83 | 3.07 | 0.711 | 0.83 | -1.15 | -- | 0.459 | 0.255 | 14 | 16.43 | 45 | -- | -- |
| 317.5 | 0.83 | 3.08 | 0.644 | 0.826 | -1.19 | -- | -- | 0.233 | 14 | 15.37 | 45 | -- | -- |
| 345.51 | 0.866 | 3.1 | 0.508 | -- | -0.266 | -- | 0.605 | 0.109 | -- | 15.2 | 16 | -- | -- |
| 332.18 | 0.854 | 3.12 | 0.388 | 0.484 | -- | 0.263 | -- | 0.0569 | 13.5 | -- | -- | -- | -- |
| 332.45 | 0.854 | 3.12 | 0.397 | 0.484 | -- | -- | -- | 0.0586 | 13.5 | -- | -- | -- | -- |
| 329.25 | 0.845 | 3.08 | 0.673 | -- | -1.02 | -- | -- | 0.22 | -- | 14.86 | 996 | -- | -- |
| 326.76 | 0.842 | 3.09 | -- | 0.753 | -0.764 | -- | -- | 0.146 | 14 | 20.6 | 52 | -- | -- |
| 346.81 | 0.87 | 3.12 | 0.378 | -- | -- | -- | -- | 0.048 | -- | -- | -- | -- | -- |
| 336.61 | 0.858 | 3.13 | -- | 0.477 | -- | -- | -- | 0.0143 | 13.5 | -- | -- | -- | -- |
| 339.68 | 0.858 | 3.11 | -- | -- | -0.686 | -- | -- | 0.11 | -- | 17 | 969 | -- | -- |
| 350.57 | 0.874 | 3.13 | -- | -- | -- | -- | -- | 0.00613 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 309.17 | wind | 1.0 | 10 | < th | dose dependent | rect. | 4 | 1 |
| 2 | 309.99 | wind | 1.0 | 10 | < th | dose independent | rect. | 4 | 1 |
| 5 | 310.37 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 3 | 1 |
| 9 | 310.37 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 3 | 1 |
| 13 | 310.44 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 13 | 23 |
| 15 | 310.97 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 14 | 22 |
| 34 | 313.11 | temperature | 30.0 | 270 | < th | dose independent | rect. | 9 | 21 |
| 42 | 313.78 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 6 | 17 |
| 43 | 313.79 | temperature | 25.0 | 720 | > th | dose independent | rect. | 6 | 2 |
| 48 | 313.97 | temperature | 25.0 | 10 | > th | dose independent | rect. | 14 | 22 |
| 64 | 314.63 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 4 | 19 |
| 65 | 314.64 | temperature | 30.0 | 270 | < th | dose independent | rect. | 9 | 9 |
| 69 | 314.71 | atmosphere | 1000.0 | 90 | < th | dose independent | rect. | 11 | 3 |
| 76 | 314.89 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 15 |
| 81 | 315.02 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 12 | 2 |
| 86 | 315.07 | temperature | 25.0 | 720 | < th | dose independent | rect. | 2 | 7 |
| 111 | 315.52 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 6 | 23 |
| 132 | 315.77 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 22 | 19 |
| 148 | 316.06 | temperature | 25.0 | 720 | < th | dose independent | rect. | 1 | 13 |
| 158 | 316.13 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 164 | 316.16 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 4 | 14 |
| 168 | 316.19 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 22 | 19 |
| 174 | 316.21 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 1 | 8 |
| 178 | 316.25 | temperature | 30.0 | 90 | < th | dose independent | rect. | 12 | 1 |
| 185 | 316.28 | temperature | 25.0 | 720 | < th | dose independent | rect. | 1 | 18 |
| 208 | 316.39 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 1 | 23 |
| 241 | 316.56 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 12 | 2 |
| 248 | 316.59 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 24 | 5 |
| 254 | 316.62 | temperature | 25.0 | 720 | < th | dose independent | sin | 5 | NA |
| 260 | 316.63 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 9 | 20 |
| 330 | 316.88 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 14 | 1 |
| 358 | 316.96 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 6 | 10 |
| 362 | 316.97 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 6 | 3 |
| 371 | 317.00 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 18 | 10 |
| 372 | 317.00 | temperature | 25.0 | 720 | > th | dose independent | rect. | 24 | 18 |
| 373 | 317.00 | temperature | 15.0 | 30 | > th | dose dependent | no | NA | NA |
| 382 | 317.02 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 19 | 8 |
| 403 | 317.08 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 5 | 5 |
| 418 | 317.12 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 3 | 1 |
| 426 | 317.15 | wind | 1.0 | 10 | < th | dose independent | rect. | 13 | 1 |
| 428 | 317.15 | wind | 1.0 | 10 | < th | dose dependent | rect. | 13 | 1 |
| 430 | 317.15 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 7 | 2 |
| 446 | 317.19 | temperature | 25.0 | 720 | > th | dose independent | sin | 5 | NA |
| 453 | 317.21 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 20 | 2 |
| 470 | 317.26 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 19 | 4 |
| 501 | 317.35 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 17 | 11 |
| 509 | 317.36 | temperature | 20.0 | 720 | > th | dose dependent | sin | 5 | NA |
| 526 | 317.39 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 12 | 18 |
| 541 | 317.43 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 19 | 8 |
| 566 | 317.49 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 20 | 2 |
| 578 | 317.52 | temperature | 10.0 | 720 | > th | dose dependent | sin | 3 | NA |
| 601 | 317.56 | temperature | 25.0 | 4320 | < th | dose independent | sin | 13 | NA |
| 691 | 317.77 | temperature | 25.0 | 10 | > th | dose independent | rect. | 1 | 23 |
| 720 | 317.82 | temperature | 25.0 | 4320 | > th | dose independent | sin | 13 | NA |
| 753 | 317.88 | temperature | 25.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 786 | 317.93 | temperature | 25.0 | 90 | > th | dose independent | rect. | 1 | 23 |
| 855 | 318.08 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 13 | 19 |
| 874 | 318.12 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 13 | 21 |
| 876 | 318.12 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 2 | 16 |
| 944 | 318.25 | temperature | 25.0 | 90 | < th | dose independent | rect. | 20 | 23 |
| 949 | 318.26 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 2 | 13 |
| 968 | 318.28 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 21 | 23 |
| 985 | 318.31 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 14 | 10 |