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Os01g0628900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Cytochrome P450 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.45 (0.0624) R2 : 0.758
β1 : 6.58 (0.229) R2dD : 0.455 R2D : 0.33
β2 : 3.49 (0.156) R2dC : 0.266 R2C : 0.205
β3 : -4.1 (0.394) R2dE : 0.0578 R2E : 0.0249
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 1.7 (0.134) R2dN8 : 0.116 R2N8 : 0.0154
σ : 1.17
deviance : 628.77
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C
peak time of C : 15.3
E
wheather : atmosphere
threshold : 1012
memory length : 72
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 17.8
open length of G : 5.33

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
621.55 1.17 8.44 6.62 3.5 -4.82 -0.551 5.56 1.66 15.2 1010 72 17.8 5.3
627.84 1.17 8.45 6.64 3.51 -4.15 -0.589 -- 1.71 15.3 1012 63 17.9 5.32
622 1.16 8.44 6.6 3.51 -4.64 -- 5 1.67 15.2 1011 71 17.8 5.3
628.77 1.17 8.45 6.58 3.49 -4.1 -- -- 1.7 15.3 1012 72 17.8 5.33
853.37 1.36 8.44 6.47 -- -3.42 -- 0.84 1.62 -- 1027 2 21.9 10.1
717 1.26 8.39 6.56 3.47 -- -0.75 -- 1.79 14.2 -- -- -- --
719.11 1.26 8.39 6.54 3.47 -- -- -- 1.79 14.2 -- -- -- --
695.97 1.23 8.32 6.86 -- -3.87 -- -- 1.6 -- 1029 843 17.4 3.24
1763.08 1.96 8.54 -- 3.34 -3.41 -- -- 1.04 15.2 1013 40 18.4 5.13
1438.44 1.77 8.42 6.39 -- -- -- -- 1.71 -- -- -- -- --
1845.46 2.01 8.56 -- 3.35 -- -- -- 1.06 14.1 -- -- -- --
1820.48 1.99 8.56 -- -- -3.49 -- -- 1.1 -- 1044 843 17.5 3.22
2516.17 2.34 8.58 -- -- -- -- -- 0.998 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 630.11 atmosphere 1010.0 90 < th dose dependent rect. 18 5
2 630.61 atmosphere 1010.0 270 < th dose dependent rect. 17 3
5 633.11 atmosphere 1015.0 270 < th dose dependent rect. 16 5
15 637.43 atmosphere 1015.0 270 < th dose dependent rect. 15 7
17 637.57 temperature 20.0 270 > th dose independent rect. 16 17
18 637.65 radiation 1.0 30 < th dose dependent rect. 16 7
34 640.96 radiation 1.0 30 < th dose dependent rect. 11 12
77 643.83 radiation 1.0 30 < th dose dependent sin 20 NA
79 644.25 radiation 1.0 30 < th dose independent rect. 16 7
87 645.43 radiation 1.0 14400 < th dose dependent rect. 19 5
106 647.05 radiation 1.0 30 < th dose independent rect. 11 12
124 648.79 radiation 1.0 270 < th dose independent rect. 16 3
165 650.83 atmosphere 995.0 14400 < th dose independent rect. 18 1
169 650.83 atmosphere 995.0 14400 < th dose dependent rect. 18 1
172 650.92 radiation 10.0 270 < th dose dependent rect. 16 3
183 651.70 humidity 50.0 270 > th dose independent rect. 16 4
189 652.45 atmosphere 995.0 14400 > th dose independent rect. 17 1
191 652.66 radiation 1.0 90 > th dose independent sin 21 NA
199 653.04 radiation 1.0 90 < th dose independent sin 21 NA
202 653.30 wind 1.0 43200 < th dose independent rect. 22 1
206 653.56 wind 7.0 4320 > th dose independent rect. 17 7
212 653.66 humidity 60.0 270 > th dose independent rect. 18 1
222 654.02 wind 7.0 4320 < th dose independent rect. 17 7
270 655.31 wind 1.0 43200 < th dose dependent rect. 22 1
288 656.00 wind 1.0 43200 > th dose independent rect. 22 2
298 656.19 wind 1.0 43200 > th dose independent rect. 20 3
302 656.26 radiation 1.0 14400 < th dose dependent rect. 19 2
310 656.47 temperature 30.0 90 < th dose independent rect. 17 5
319 656.71 atmosphere 995.0 14400 > th dose independent rect. 7 12
338 657.19 wind 5.0 4320 > th dose dependent rect. 19 2
345 657.26 temperature 20.0 270 > th dose independent rect. 1 21
347 657.27 wind 5.0 4320 > th dose dependent rect. 17 7
348 657.28 humidity 60.0 10 > th dose independent rect. 18 5
351 657.40 atmosphere 995.0 14400 > th dose independent rect. 13 6
354 657.43 radiation 1.0 30 < th dose dependent rect. 17 3
372 657.71 wind 7.0 270 < th dose independent rect. 18 1
374 657.78 temperature 20.0 90 > th dose independent rect. 3 20
379 657.83 temperature 20.0 270 > th dose independent rect. 18 1
390 658.13 atmosphere 995.0 14400 > th dose independent rect. 10 9
391 658.16 temperature 20.0 270 > th dose independent rect. 1 9
397 658.27 wind 9.0 270 < th dose dependent rect. 18 1
405 658.44 atmosphere 1000.0 90 > th dose independent rect. 22 19
413 658.51 temperature 25.0 90 > th dose dependent rect. 10 8
422 658.58 atmosphere 1000.0 270 > th dose independent rect. 19 22
430 658.76 atmosphere 1000.0 270 > th dose independent rect. 20 20
445 659.01 temperature 15.0 90 > th dose dependent rect. 18 15
446 659.03 wind 1.0 43200 < th dose independent rect. 18 9
449 659.12 precipitation 0.1 270 < th dose independent rect. 18 1
450 659.12 precipitation 0.1 270 < th dose dependent rect. 18 1
457 659.26 temperature 10.0 270 > th dose independent rect. 18 1
460 659.26 atmosphere 1010.0 270 < th dose independent rect. 18 1
465 659.26 temperature 10.0 270 > th dose independent rect. 19 23
472 659.32 temperature 20.0 270 > th dose independent rect. 17 3
473 659.34 wind 1.0 270 > th dose independent rect. 18 1
482 659.41 humidity 50.0 90 > th dose dependent rect. 17 5
491 659.57 humidity 50.0 10 > th dose dependent rect. 18 5
492 659.58 wind 1.0 43200 > th dose independent rect. 18 9
511 659.85 humidity 50.0 270 > th dose dependent rect. 18 1
514 659.91 atmosphere 1010.0 270 < th dose independent rect. 16 4
536 660.18 wind 1.0 43200 < th dose independent rect. 20 4
537 660.18 radiation 20.0 270 < th dose independent rect. 16 4
587 660.56 temperature 30.0 270 < th dose independent rect. 18 1
589 660.56 atmosphere 995.0 90 > th dose dependent rect. 12 15
602 660.82 precipitation 0.1 270 < th dose independent rect. 20 20
604 660.82 precipitation 0.1 270 < th dose dependent rect. 20 20
608 660.91 wind 1.0 30 > th dose independent rect. 23 19
609 660.92 temperature 20.0 720 > th dose independent rect. 17 6
627 661.16 temperature 25.0 90 > th dose independent rect. 10 8
629 661.19 wind 9.0 270 < th dose independent rect. 20 20
642 661.36 wind 7.0 90 < th dose independent rect. 22 20
646 661.41 wind 9.0 270 < th dose independent rect. 16 4
647 661.42 temperature 10.0 270 > th dose independent rect. 16 4
649 661.42 radiation 40.0 270 < th dose independent rect. 16 4
650 661.42 temperature 10.0 270 > th dose independent rect. 20 20
658 661.51 temperature 30.0 10 < th dose independent rect. 18 5
665 661.62 radiation 40.0 43200 > th dose independent rect. 14 19
666 661.66 atmosphere 1015.0 90 < th dose independent rect. 17 6
667 661.67 precipitation 0.1 270 < th dose independent rect. 16 4
669 661.67 precipitation 0.1 270 < th dose dependent rect. 16 4
673 661.73 wind 1.0 43200 < th dose independent rect. 20 7
676 661.74 wind 1.0 43200 < th dose dependent rect. 17 10
687 661.83 precipitation 0.1 270 < th dose independent rect. 19 23
688 661.83 precipitation 0.1 270 < th dose dependent rect. 19 23
709 661.98 wind 1.0 270 > th dose independent rect. 16 4
724 662.04 atmosphere 1015.0 270 < th dose independent rect. 15 6
741 662.15 temperature 10.0 270 > th dose dependent rect. 18 1
759 662.27 atmosphere 1005.0 30 < th dose independent rect. 19 3
769 662.29 wind 9.0 270 < th dose independent rect. 19 23
783 662.37 wind 1.0 43200 > th dose independent rect. 20 7
789 662.41 atmosphere 995.0 10 > th dose dependent rect. 12 15
790 662.42 humidity 50.0 10 > th dose dependent rect. 16 7
794 662.46 wind 7.0 4320 < th dose independent rect. 19 1
795 662.47 wind 1.0 270 > th dose independent rect. 20 20
799 662.52 radiation 40.0 43200 > th dose independent rect. 14 2
838 662.79 wind 5.0 4320 > th dose independent rect. 20 2
843 662.84 humidity 50.0 270 > th dose independent rect. 21 18
848 662.93 precipitation 0.1 30 < th dose independent rect. 23 19
849 662.93 precipitation 0.1 30 < th dose dependent rect. 23 19
856 663.00 temperature 20.0 720 < th dose independent rect. 18 6
868 663.11 humidity 50.0 43200 > th dose independent rect. 14 3
872 663.14 atmosphere 995.0 90 > th dose independent rect. 17 5
895 663.27 temperature 10.0 90 > th dose independent rect. 22 19
914 663.38 wind 1.0 43200 < th dose dependent rect. 20 4
920 663.51 atmosphere 1005.0 14400 < th dose independent rect. 16 7
921 663.53 wind 1.0 30 > th dose independent rect. 18 5
928 663.59 atmosphere 1005.0 14400 < th dose independent rect. 18 3
956 663.83 atmosphere 1005.0 14400 < th dose independent rect. 18 1