Os01g0627800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Cytochrome P450 monooxygenase CYP72A5 (Fragment).
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Os01g0627800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Cytochrome P450 monooxygenase CYP72A5 (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 621.45 | 1.17 | 6.57 | -0.111 | 6.15 | -3.85 | 1.18 | 0.498 | -0.314 | 11.5 | 20.9 | 1857 | -- | -- |
| 621.98 | 1.16 | 6.59 | -0.22 | 6.14 | -3.9 | 1.16 | -- | -0.338 | 11.5 | 20.91 | 1869 | -- | -- |
| 627.4 | 1.17 | 6.57 | -0.0714 | 6.15 | -3.85 | -- | 0.455 | -0.31 | 11.5 | 20.91 | 1861 | -- | -- |
| 627.8 | 1.17 | 6.59 | -0.176 | 6.15 | -3.9 | -- | -- | -0.335 | 11.5 | 20.9 | 1861 | -- | -- |
| 2666.42 | 2.4 | 6.57 | 0.0686 | -- | -5.16 | -- | 2.51 | 0.159 | -- | 25 | 2354 | -- | -- |
| 996.48 | 1.48 | 6.82 | -2 | 6.24 | -- | 1.17 | -- | -1.36 | 11.5 | -- | -- | -- | -- |
| 1002.42 | 1.48 | 6.81 | -1.95 | 6.23 | -- | -- | -- | -1.35 | 11.5 | -- | -- | -- | -- |
| 2634.6 | 2.39 | 6.61 | -0.211 | -- | -4.26 | -- | -- | 0.227 | -- | 22.2 | 864 | -- | -- |
| 628.47 | 1.17 | 6.58 | -- | 6.15 | -3.96 | -- | -- | -0.299 | 11.5 | 20.98 | 1861 | -- | -- |
| 3439.71 | 2.74 | 6.96 | -2.12 | -- | -- | -- | -- | -1.42 | -- | -- | -- | -- | -- |
| 1103.14 | 1.55 | 6.76 | -- | 6.25 | -- | -- | -- | -1.13 | 11.5 | -- | -- | -- | -- |
| 2280.91 | 2.22 | 6.6 | -- | -- | -5 | -- | -- | 0.25 | -- | 24.8 | 832 | -- | -- |
| 3558.31 | 2.78 | 6.91 | -- | -- | -- | -- | -- | -1.18 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 613.98 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 2 | 617.11 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 5 | 630.29 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 6 | 631.30 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 5 |
| 29 | 639.61 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 10 |
| 32 | 640.25 | temperature | 20 | 1440 | > th | dose independent | sin | 8 | NA |
| 38 | 640.76 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 10 |
| 60 | 642.21 | temperature | 20 | 1440 | < th | dose independent | sin | 8 | NA |
| 248 | 654.31 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 261 | 654.84 | temperature | 20 | 4320 | > th | dose independent | rect. | 17 | 7 |
| 281 | 656.07 | temperature | 20 | 4320 | < th | dose independent | rect. | 17 | 7 |
| 349 | 658.99 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 377 | 660.24 | temperature | 10 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 406 | 661.30 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 2 |
| 472 | 663.75 | temperature | 25 | 720 | < th | dose dependent | sin | 14 | NA |
| 484 | 664.09 | temperature | 20 | 1440 | > th | dose independent | no | NA | NA |
| 507 | 665.14 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 519 | 665.48 | temperature | 25 | 1440 | < th | dose dependent | rect. | 19 | 14 |
| 521 | 665.54 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 23 |
| 540 | 665.82 | temperature | 20 | 4320 | > th | dose independent | sin | 17 | NA |
| 547 | 665.88 | temperature | 25 | 720 | < th | dose dependent | rect. | 16 | 13 |
| 548 | 665.89 | temperature | 25 | 1440 | < th | dose dependent | sin | 10 | NA |
| 610 | 667.21 | temperature | 20 | 1440 | < th | dose independent | no | NA | NA |
| 671 | 668.43 | temperature | 20 | 4320 | < th | dose independent | sin | 17 | NA |
| 695 | 669.04 | temperature | 20 | 1440 | < th | dose independent | rect. | 1 | 23 |
| 768 | 670.63 | temperature | 20 | 270 | > th | dose independent | rect. | 13 | 22 |
| 831 | 671.86 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 23 |