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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os01g0627600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Cytochrome P450 monooxygenase CYP72A5 (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.97 (0.0433) R2 : 0.001
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0617 (0.0911) R2dN8 : 0.0013 R2N8 : 0.001
σ : 0.815
deviance : 304.81
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
277.62 0.783 2.95 0.541 0.0374 0.78 0.485 0.859 0.256 21.7 1010 8828 -- --
278.35 0.777 2.92 0.745 0.0304 0.737 0.489 -- 0.287 21.7 1008 10288 -- --
278.49 0.777 2.95 0.514 0.0366 0.779 -- 0.873 0.253 21.5 1010 8866 -- --
279.25 0.778 2.93 0.725 0.0288 0.734 -- -- 0.286 21.5 1008 10294 -- --
278.57 0.777 2.95 0.515 -- 0.775 -- 0.865 0.252 -- 1010 8869 -- --
298.61 0.81 2.96 0.466 0.0372 -- 0.481 -- 0.112 20.7 -- -- -- --
299.36 0.81 2.96 0.451 0.0415 -- -- -- 0.112 19.1 -- -- -- --
279.29 0.778 2.92 0.725 -- 0.735 -- -- 0.285 -- 1008 10291 -- --
291.64 0.795 2.95 -- 0.0299 0.588 -- -- 0.155 21.4 1007 10473 -- --
299.45 0.809 2.96 0.451 -- -- -- -- 0.112 -- -- -- -- --
304.73 0.817 2.98 -- 0.0374 -- -- -- 0.0621 19.8 -- -- -- --
291.7 0.795 2.95 -- -- 0.588 -- -- 0.156 -- 1007 10484 -- --
304.81 0.815 2.97 -- -- -- -- -- 0.0617 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 274.52 radiation 40.0 10 < th dose independent rect. 13 1
3 275.32 humidity 50.0 90 < th dose dependent rect. 13 2
4 275.42 humidity 50.0 90 < th dose independent rect. 13 2
5 276.57 humidity 80.0 30 < th dose dependent rect. 13 1
9 277.22 temperature 10.0 30 > th dose dependent rect. 14 23
12 277.63 precipitation 0.1 10 < th dose independent rect. 14 23
13 277.63 precipitation 0.1 10 < th dose dependent rect. 14 23
15 277.65 atmosphere 1010.0 4320 > th dose dependent rect. 22 1
19 277.68 atmosphere 1010.0 14400 > th dose independent rect. 15 1
22 277.95 atmosphere 1010.0 14400 > th dose dependent rect. 16 1
26 278.03 humidity 80.0 30 < th dose independent rect. 13 1
28 278.07 radiation 20.0 30 > th dose independent rect. 13 1
48 278.23 atmosphere 1010.0 4320 > th dose independent rect. 16 3
49 278.23 atmosphere 1010.0 14400 > th dose dependent rect. 18 1
55 278.29 atmosphere 1010.0 4320 < th dose independent rect. 18 1
60 278.34 atmosphere 1010.0 4320 < th dose independent rect. 15 4
83 278.49 atmosphere 1010.0 4320 > th dose independent rect. 23 1
89 278.53 atmosphere 1010.0 4320 > th dose independent rect. 14 10
93 278.56 radiation 1.0 14400 < th dose independent rect. 8 10
101 278.59 radiation 1.0 1440 < th dose independent rect. 11 19
103 278.59 radiation 1.0 720 < th dose dependent rect. 2 23
114 278.64 wind 5.0 30 < th dose independent rect. 13 1
122 278.71 radiation 1.0 14400 < th dose independent rect. 12 6
141 278.78 radiation 1.0 14400 < th dose independent rect. 8 22
157 278.84 radiation 1.0 14400 < th dose independent rect. 8 15
162 278.85 radiation 1.0 14400 < th dose independent rect. 8 13
167 278.85 radiation 1.0 14400 < th dose independent rect. 12 18
186 278.90 radiation 1.0 14400 < th dose independent rect. 12 11
189 278.91 humidity 80.0 43200 > th dose independent rect. 16 2
192 278.91 radiation 1.0 14400 < th dose independent rect. 12 9
251 278.98 radiation 1.0 14400 < th dose independent sin 19 NA
253 278.98 radiation 1.0 1440 < th dose dependent rect. 11 19
275 279.02 atmosphere 1010.0 4320 < th dose independent rect. 14 10
307 279.09 atmosphere 1005.0 90 < th dose dependent rect. 12 3
316 279.10 radiation 1.0 720 < th dose independent rect. 2 16
319 279.11 humidity 80.0 43200 < th dose independent rect. 16 1
321 279.12 radiation 1.0 1440 > th dose independent rect. 11 19
324 279.13 radiation 1.0 14400 > th dose independent rect. 8 22
326 279.14 atmosphere 1010.0 14400 > th dose dependent sin 19 NA
337 279.19 radiation 1.0 14400 > th dose independent rect. 12 18
344 279.21 radiation 1.0 14400 > th dose independent rect. 8 10
378 279.28 radiation 1.0 720 < th dose dependent rect. 2 16
429 279.35 radiation 1.0 14400 > th dose independent rect. 12 6
536 279.47 radiation 1.0 14400 > th dose independent sin 19 NA
551 279.48 humidity 80.0 43200 < th dose independent rect. 15 4
559 279.50 precipitation 0.1 90 > th dose independent rect. 19 2
567 279.50 precipitation 0.1 90 > th dose dependent rect. 19 2
571 279.51 radiation 1.0 1440 > th dose independent rect. 15 2
595 279.53 atmosphere 1010.0 4320 > th dose independent sin 16 NA
597 279.53 radiation 1.0 1440 < th dose independent rect. 14 4
604 279.54 radiation 1.0 1440 < th dose independent rect. 15 2
611 279.55 radiation 1.0 14400 < th dose dependent rect. 14 4
613 279.55 radiation 1.0 14400 < th dose dependent rect. 8 10
618 279.56 radiation 1.0 14400 < th dose independent rect. 5 13
624 279.57 precipitation 0.1 10 > th dose independent rect. 19 3
628 279.57 radiation 1.0 14400 < th dose independent rect. 3 15
632 279.57 radiation 1.0 14400 < th dose independent rect. 5 18
633 279.57 radiation 1.0 14400 < th dose independent rect. 3 20
634 279.57 radiation 1.0 14400 < th dose independent rect. 22 20
637 279.57 radiation 1.0 14400 < th dose independent rect. 12 22
642 279.57 precipitation 0.1 10 > th dose dependent rect. 19 3
649 279.58 radiation 1.0 14400 < th dose independent no NA NA
704 279.58 radiation 1.0 14400 < th dose dependent rect. 12 18
705 279.58 radiation 1.0 14400 < th dose dependent rect. 9 21
709 279.59 radiation 1.0 1440 < th dose independent rect. 11 12
729 279.59 radiation 1.0 14400 < th dose dependent rect. 12 14
731 279.59 radiation 1.0 14400 < th dose dependent rect. 12 16
734 279.60 precipitation 0.1 43200 > th dose independent rect. 20 1
741 279.60 radiation 1.0 720 < th dose independent rect. 2 23
750 279.60 radiation 1.0 14400 < th dose dependent rect. 9 17
751 279.60 radiation 1.0 14400 < th dose dependent rect. 9 19
805 279.63 wind 5.0 30 < th dose dependent rect. 13 1
819 279.64 radiation 1.0 1440 < th dose independent rect. 11 8
824 279.64 radiation 1.0 14400 < th dose dependent rect. 12 9
838 279.65 precipitation 0.1 43200 < th dose independent rect. 20 1
849 279.65 precipitation 0.1 43200 < th dose dependent rect. 20 1
856 279.65 radiation 1.0 14400 < th dose dependent rect. 9 12
863 279.66 atmosphere 1015.0 14400 < th dose independent rect. 23 1
891 279.67 radiation 1.0 14400 > th dose independent rect. 5 12
894 279.67 radiation 1.0 14400 < th dose dependent sin 17 NA