Os01g0627500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome P450 family protein.
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Os01g0627500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cytochrome P450 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 58.12 | 0.358 | 10.9 | 0.338 | 1.47 | -0.78 | -0.277 | -0.11 | -0.0916 | 12.4 | 20.63 | 1510 | -- | -- |
| 58.12 | 0.355 | 10.9 | 0.356 | 1.46 | -0.756 | -0.272 | -- | -0.0857 | 12.4 | 20.78 | 1512 | -- | -- |
| 58.42 | 0.356 | 10.9 | 0.339 | 1.46 | -0.777 | -- | -0.0942 | -0.0855 | 12.4 | 20.7 | 1469 | -- | -- |
| 58.43 | 0.356 | 10.9 | 0.349 | 1.46 | -0.756 | -- | -- | -0.0844 | 12.4 | 20.77 | 1468 | -- | -- |
| 180.5 | 0.626 | 10.9 | 0.253 | -- | -0.918 | -- | -0.129 | 0.00306 | -- | 24.8 | 2402 | -- | -- |
| 71.3 | 0.396 | 10.9 | 0.0424 | 1.48 | -- | -0.275 | -- | -0.266 | 12.4 | -- | -- | -- | -- |
| 71.62 | 0.396 | 10.9 | 0.0317 | 1.48 | -- | -- | -- | -0.267 | 12.4 | -- | -- | -- | -- |
| 177.08 | 0.62 | 10.9 | 0.194 | -- | -0.803 | -- | -- | 0.00126 | -- | 21.8 | 901 | -- | -- |
| 61.09 | 0.364 | 10.9 | -- | 1.46 | -0.616 | -- | -- | -0.152 | 12.4 | 20.8 | 1433 | -- | -- |
| 208.5 | 0.675 | 10.9 | -0.0185 | -- | -- | -- | -- | -0.291 | -- | -- | -- | -- | -- |
| 71.65 | 0.396 | 10.9 | -- | 1.48 | -- | -- | -- | -0.27 | 12.4 | -- | -- | -- | -- |
| 164.56 | 0.597 | 10.9 | -- | -- | -1.02 | -- | -- | 0.0434 | -- | 24.99 | 915 | -- | -- |
| 208.51 | 0.674 | 10.9 | -- | -- | -- | -- | -- | -0.289 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 51.65 | wind | 3 | 14400 | < th | dose dependent | rect. | 22 | 3 |
| 8 | 52.72 | wind | 9 | 14400 | < th | dose dependent | rect. | 21 | 5 |
| 12 | 52.77 | wind | 7 | 14400 | < th | dose dependent | rect. | 19 | 12 |
| 27 | 52.93 | wind | 1 | 14400 | > th | dose dependent | rect. | 18 | 13 |
| 45 | 53.10 | wind | 1 | 14400 | > th | dose dependent | rect. | 21 | 5 |
| 50 | 53.12 | wind | 9 | 14400 | < th | dose dependent | sin | 10 | NA |
| 76 | 53.27 | wind | 1 | 14400 | > th | dose dependent | sin | 11 | NA |
| 94 | 53.36 | wind | 1 | 14400 | > th | dose independent | rect. | 21 | 8 |
| 98 | 53.37 | wind | 5 | 14400 | < th | dose dependent | rect. | 20 | 16 |
| 99 | 53.38 | wind | 1 | 14400 | > th | dose independent | rect. | 21 | 10 |
| 148 | 53.56 | wind | 3 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 164 | 53.59 | wind | 1 | 14400 | > th | dose independent | rect. | 19 | 12 |
| 237 | 53.75 | wind | 1 | 14400 | > th | dose independent | rect. | 20 | 16 |
| 243 | 53.77 | wind | 1 | 14400 | < th | dose independent | rect. | 21 | 8 |
| 290 | 53.86 | wind | 1 | 14400 | > th | dose dependent | rect. | 20 | 8 |
| 319 | 53.92 | wind | 1 | 14400 | > th | dose independent | sin | 10 | NA |
| 324 | 53.93 | temperature | 20 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 330 | 53.94 | wind | 1 | 14400 | < th | dose independent | rect. | 21 | 10 |
| 334 | 53.96 | wind | 1 | 14400 | < th | dose independent | rect. | 19 | 12 |
| 359 | 54.03 | wind | 1 | 14400 | > th | dose independent | rect. | 23 | 3 |
| 423 | 54.16 | wind | 9 | 14400 | < th | dose dependent | rect. | 22 | 1 |
| 433 | 54.19 | wind | 1 | 14400 | < th | dose independent | rect. | 20 | 16 |
| 500 | 54.35 | wind | 1 | 14400 | < th | dose independent | sin | 10 | NA |
| 561 | 54.48 | temperature | 20 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 566 | 54.48 | wind | 1 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 638 | 54.66 | wind | 1 | 43200 | < th | dose independent | rect. | 24 | 2 |
| 717 | 54.80 | wind | 9 | 14400 | < th | dose dependent | rect. | 5 | 7 |
| 764 | 54.87 | wind | 5 | 14400 | < th | dose dependent | rect. | 4 | 9 |
| 856 | 55.02 | humidity | 80 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 897 | 55.07 | wind | 1 | 14400 | > th | dose dependent | rect. | 5 | 7 |
| 940 | 55.11 | humidity | 80 | 43200 | < th | dose independent | rect. | 5 | 4 |
| 948 | 55.12 | wind | 9 | 14400 | < th | dose independent | rect. | 7 | 5 |