Os01g0627400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Cytochrome P450 monooxygenase CYP72A5 (Fragment).
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Os01g0627400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Cytochrome P450 monooxygenase CYP72A5 (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 147.88 | 0.571 | 11.7 | 1.13 | 2.79 | -1.91 | 0.756 | 0.0796 | -0.117 | 8.24 | 20.5 | 1550 | -- | -- |
| 147.9 | 0.566 | 11.7 | 1.11 | 2.79 | -1.92 | 0.757 | -- | -0.12 | 8.24 | 20.51 | 1550 | -- | -- |
| 149.62 | 0.57 | 11.7 | 1.16 | 2.79 | -1.93 | -- | 0.096 | -0.111 | 8.22 | 20.5 | 1550 | -- | -- |
| 149.64 | 0.57 | 11.7 | 1.14 | 2.79 | -1.94 | -- | -- | -0.117 | 8.21 | 20.6 | 1550 | -- | -- |
| 523.64 | 1.07 | 11.8 | 0.947 | -- | -1.87 | -- | -0.255 | -0.04 | -- | 21.3 | 700 | -- | -- |
| 227.49 | 0.707 | 11.8 | 0.306 | 2.77 | -- | 1.03 | -- | -0.555 | 8.27 | -- | -- | -- | -- |
| 230.73 | 0.711 | 11.8 | 0.336 | 2.77 | -- | -- | -- | -0.556 | 8.24 | -- | -- | -- | -- |
| 386.63 | 0.916 | 11.8 | 1.05 | -- | -2.28 | -- | -- | 0.255 | -- | 25.2 | 590 | -- | -- |
| 177.55 | 0.621 | 11.8 | -- | 2.81 | -1.46 | -- | -- | -0.316 | 8.18 | 20.7 | 1515 | -- | -- |
| 655.94 | 1.2 | 11.9 | 0.356 | -- | -- | -- | -- | -0.525 | -- | -- | -- | -- | -- |
| 233.7 | 0.715 | 11.8 | -- | 2.78 | -- | -- | -- | -0.594 | 8.24 | -- | -- | -- | -- |
| 410.06 | 0.943 | 11.7 | -- | -- | -2.16 | -- | -- | 0.185 | -- | 25.21 | 581 | -- | -- |
| 659.28 | 1.2 | 11.9 | -- | -- | -- | -- | -- | -0.565 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 146.35 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 2 | 147.31 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 14 |
| 3 | 147.34 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 11 |
| 4 | 147.35 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 5 | 147.36 | temperature | 20 | 1440 | > th | dose independent | sin | 9 | NA |
| 31 | 147.86 | temperature | 20 | 1440 | < th | dose independent | rect. | 20 | 11 |
| 32 | 147.92 | temperature | 20 | 1440 | < th | dose independent | sin | 9 | NA |
| 342 | 151.03 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 4 |
| 366 | 151.29 | temperature | 20 | 1440 | > th | dose independent | no | NA | NA |
| 418 | 151.92 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 23 |
| 427 | 152.13 | temperature | 20 | 1440 | < th | dose independent | no | NA | NA |
| 428 | 152.13 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 23 |
| 475 | 152.86 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 23 |
| 486 | 153.07 | temperature | 20 | 1440 | < th | dose independent | rect. | 23 | 2 |
| 493 | 153.13 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 23 |
| 517 | 153.60 | temperature | 30 | 270 | < th | dose dependent | rect. | 9 | 22 |
| 534 | 153.96 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 551 | 154.37 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 579 | 155.17 | temperature | 15 | 270 | > th | dose dependent | rect. | 5 | 21 |
| 627 | 155.95 | temperature | 20 | 270 | > th | dose independent | rect. | 5 | 22 |
| 645 | 156.41 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 8 |
| 646 | 156.41 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 15 |
| 672 | 156.65 | temperature | 25 | 1440 | < th | dose dependent | sin | 10 | NA |
| 707 | 156.86 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 756 | 157.45 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 2 |
| 778 | 157.61 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 2 |
| 780 | 157.61 | temperature | 30 | 1440 | < th | dose dependent | rect. | 24 | 5 |
| 998 | 159.10 | temperature | 25 | 90 | < th | dose dependent | rect. | 15 | 20 |