Os01g0626100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Adaptin, N-terminal domain containing protein.
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Os01g0626100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Adaptin, N-terminal domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 49.85 | 0.332 | 9.7 | 1.87 | 0.171 | -1.35 | -0.268 | 2.17 | 0.66 | 22.4 | 20.2 | 78 | -- | -- |
| 52.21 | 0.339 | 9.75 | 1.48 | 0.0863 | -1.36 | -0.869 | -- | 0.556 | 1.69 | 18.23 | 37 | -- | -- |
| 49.93 | 0.329 | 9.7 | 1.91 | 0.149 | -1.39 | -- | 2.38 | 0.673 | 22 | 20.22 | 60 | -- | -- |
| 54.61 | 0.344 | 9.74 | 1.53 | 0.178 | -1.49 | -- | -- | 0.553 | 23.3 | 15.14 | 61 | -- | -- |
| 50.93 | 0.334 | 9.7 | 1.88 | -- | -1.45 | -- | 2.24 | 0.673 | -- | 20.22 | 60 | -- | -- |
| 77.17 | 0.412 | 9.8 | 1.2 | 0.548 | -- | -0.651 | -- | 0.333 | 1.86 | -- | -- | -- | -- |
| 78.82 | 0.416 | 9.8 | 1.22 | 0.548 | -- | -- | -- | 0.337 | 1.88 | -- | -- | -- | -- |
| 55.34 | 0.348 | 9.74 | 1.55 | -- | -1.65 | -- | -- | 0.576 | -- | 15.14 | 61 | -- | -- |
| 108.99 | 0.489 | 9.8 | -- | 0.3 | -0.744 | -- | -- | 0.31 | 1.54 | 20.3 | 35 | -- | -- |
| 96.97 | 0.46 | 9.79 | 1.24 | -- | -- | -- | -- | 0.349 | -- | -- | -- | -- | -- |
| 118.01 | 0.508 | 9.83 | -- | 0.571 | -- | -- | -- | 0.201 | 1.94 | -- | -- | -- | -- |
| 112.72 | 0.496 | 9.79 | -- | -- | -1.02 | -- | -- | 0.351 | -- | 20.49 | 6 | -- | -- |
| 137.67 | 0.548 | 9.82 | -- | -- | -- | -- | -- | 0.211 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 49.27 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 6 | 23 |
| 2 | 49.54 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 19 | 23 |
| 3 | 49.83 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 5 | 49.96 | temperature | 20.0 | 90 | > th | dose dependent | no | NA | NA |
| 6 | 49.99 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 7 | 50.01 | temperature | 20.0 | 10 | > th | dose dependent | no | NA | NA |
| 15 | 50.71 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 23 | 23 |
| 26 | 51.14 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 24 | 23 |
| 33 | 51.33 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 35 | 51.34 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 17 | 23 |
| 37 | 51.40 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 4 | 23 |
| 41 | 51.45 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 21 | 23 |
| 42 | 51.48 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 46 | 51.58 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 59 | 51.80 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 63 | 51.90 | temperature | 30.0 | 90 | < th | dose dependent | no | NA | NA |
| 69 | 52.04 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 4 | 23 |
| 80 | 52.12 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 82 | 52.13 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 9 | 23 |
| 83 | 52.15 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 87 | 52.21 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 100 | 52.43 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 119 | 52.68 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 16 | 13 |
| 121 | 52.69 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 16 | 6 |
| 122 | 52.69 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 135 | 52.82 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 16 | 6 |
| 137 | 52.83 | wind | 9.0 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 141 | 52.84 | temperature | 20.0 | 1440 | > th | dose dependent | sin | 14 | NA |
| 149 | 52.89 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 13 | 23 |
| 164 | 52.97 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 17 | 23 |
| 177 | 53.03 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 16 | 9 |
| 274 | 53.47 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 310 | 53.58 | temperature | 25.0 | 1440 | > th | dose independent | sin | 16 | NA |
| 345 | 53.71 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 363 | 53.79 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 373 | 53.81 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 377 | 53.82 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 11 | 23 |
| 383 | 53.84 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 384 | 53.84 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 389 | 53.86 | temperature | 25.0 | 1440 | < th | dose independent | sin | 16 | NA |
| 399 | 53.89 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 405 | 53.91 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 17 | 22 |
| 412 | 53.93 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 434 | 53.98 | temperature | 20.0 | 1440 | > th | dose dependent | no | NA | NA |
| 438 | 53.99 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 19 | 4 |
| 440 | 54.00 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 9 | 17 |
| 454 | 54.03 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 455 | 54.03 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 466 | 54.05 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 23 | 23 |
| 486 | 54.08 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 4 | 23 |
| 490 | 54.09 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 606 | 54.34 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 11 |
| 617 | 54.37 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 622 | 54.38 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 9 | 17 |
| 662 | 54.46 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 684 | 54.50 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 16 | 21 |
| 690 | 54.51 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 7 |
| 773 | 54.65 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 802 | 54.70 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 17 | 1 |
| 853 | 54.81 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 20 | 3 |
| 858 | 54.82 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 16 | 21 |
| 879 | 54.85 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 11 | 7 |
| 924 | 54.92 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 946 | 54.95 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 954 | 54.96 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 11 | 4 |
| 959 | 54.97 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 967 | 54.98 | temperature | 25.0 | 270 | > th | dose independent | rect. | 22 | 23 |
| 975 | 54.99 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |