Os01g0625300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Heat shock transcription factor 31 (Fragment).
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Os01g0625300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Heat shock transcription factor 31 (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 200.85 | 0.666 | 7.97 | 2.31 | 2.99 | -2.43 | -1.5 | 1.17 | 0.264 | 7.62 | 10.49 | 3732 | -- | -- |
| 202.05 | 0.662 | 8.02 | 2.04 | 2.99 | -2.45 | -1.52 | -- | 0.188 | 7.62 | 10.3 | 3723 | -- | -- |
| 207.19 | 0.67 | 7.97 | 2.3 | 2.99 | -2.42 | -- | 1.32 | 0.273 | 7.62 | 10.1 | 3721 | -- | -- |
| 208.7 | 0.673 | 8.01 | 2 | 2.99 | -2.45 | -- | -- | 0.191 | 7.61 | 9.696 | 3724 | -- | -- |
| 461.41 | 1 | 7.98 | 2.44 | -- | -3.91 | -- | 2.81 | 0.588 | -- | 19.95 | 589 | -- | -- |
| 306.08 | 0.82 | 8.12 | 0.992 | 3.06 | -- | -1.44 | -- | -0.279 | 7.84 | -- | -- | -- | -- |
| 312.08 | 0.827 | 8.12 | 0.954 | 3.06 | -- | -- | -- | -0.278 | 7.84 | -- | -- | -- | -- |
| 475.03 | 1.02 | 8.04 | 1.98 | -- | -3.92 | -- | -- | 0.439 | -- | 18.57 | 575 | -- | -- |
| 284.21 | 0.785 | 8.09 | -- | 2.97 | -1.51 | -- | -- | -0.142 | 7.62 | 11.66 | 2310 | -- | -- |
| 820.88 | 1.34 | 8.19 | 0.989 | -- | -- | -- | -- | -0.236 | -- | -- | -- | -- | -- |
| 336.05 | 0.858 | 8.14 | -- | 3.07 | -- | -- | -- | -0.384 | 7.81 | -- | -- | -- | -- |
| 561.8 | 1.1 | 8.15 | -- | -- | -3.11 | -- | -- | -0.055 | -- | 23.8 | 594 | -- | -- |
| 846.69 | 1.36 | 8.22 | -- | -- | -- | -- | -- | -0.345 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 192.26 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 15 | 17 |
| 2 | 194.90 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 22 | 9 |
| 4 | 194.93 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 4 | 3 |
| 5 | 194.93 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 4 | 3 |
| 15 | 194.93 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 19 | 12 |
| 48 | 196.20 | temperature | 25.0 | 4320 | < th | dose dependent | rect. | 23 | 1 |
| 70 | 196.52 | radiation | 1.0 | 14400 | > th | dose independent | sin | 9 | NA |
| 73 | 196.60 | temperature | 15.0 | 4320 | > th | dose dependent | rect. | 22 | 2 |
| 76 | 196.75 | radiation | 1.0 | 14400 | < th | dose independent | sin | 9 | NA |
| 84 | 196.90 | radiation | 10.0 | 4320 | > th | dose dependent | rect. | 16 | 15 |
| 97 | 197.28 | radiation | 30.0 | 4320 | > th | dose dependent | rect. | 15 | 17 |
| 103 | 197.45 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 4 | 8 |
| 132 | 197.53 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 4 | 8 |
| 134 | 197.53 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 19 | 17 |
| 246 | 198.57 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 16 | 20 |
| 304 | 199.06 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 22 | 2 |
| 391 | 199.87 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 22 | 2 |
| 393 | 199.88 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 22 | 20 |
| 396 | 199.89 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 4 | 14 |
| 399 | 199.89 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 19 | 23 |
| 424 | 199.94 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 10 | 23 |
| 426 | 199.95 | radiation | 1.0 | 14400 | > th | dose independent | no | NA | NA |
| 427 | 199.95 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 4 | 15 |
| 524 | 200.19 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 16 | 15 |
| 539 | 200.23 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 4 | 21 |
| 552 | 200.25 | radiation | 1.0 | 14400 | < th | dose independent | no | NA | NA |
| 590 | 200.28 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 9 | 23 |
| 769 | 201.09 | temperature | 10.0 | 4320 | > th | dose dependent | sin | 13 | NA |
| 776 | 201.13 | temperature | 30.0 | 4320 | < th | dose dependent | sin | 13 | NA |
| 795 | 201.23 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 7 | 2 |
| 806 | 201.27 | temperature | 15.0 | 1440 | > th | dose dependent | rect. | 2 | 8 |
| 838 | 201.42 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 5 | 3 |
| 842 | 201.44 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 2 | 5 |
| 843 | 201.44 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 2 | 5 |
| 870 | 201.59 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 2 | 8 |
| 884 | 201.63 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 5 | 4 |
| 889 | 201.65 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 3 | 6 |
| 899 | 201.71 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 2 | 5 |
| 901 | 201.71 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 18 | 17 |
| 903 | 201.73 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 953 | 201.88 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 2 | 5 |
| 977 | 201.97 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 16 | 3 |