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Os01g0622600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein kinase domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.7 (0.0208) R2 : 0.533
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.16 (0.0514) R2dC : 0.52 R2C : 0.51
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.185 (0.0438) R2dN8 : 0.0235 R2N8 : 0.0136
σ : 0.393
deviance : 70.51
__
_____
C
peak time of C : 14.6
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
56.89 0.354 12.7 0.209 0.99 -0.918 -0.00695 0.301 0.233 15.1 199 1128 -- --
57 0.352 12.7 0.185 0.991 -0.895 -0.0741 -- 0.228 15.1 258.7 1129 -- --
56.89 0.351 12.7 0.209 0.99 -0.921 -- 0.308 0.233 15.2 226.5 1124 -- --
57.01 0.352 12.7 0.181 0.993 -0.897 -- -- 0.227 15.1 231.2 1125 -- --
106.79 0.481 12.7 0.233 -- -1.47 -- 0.723 0.23 -- 242.1 1126 -- --
70.07 0.392 12.7 0.129 1.16 -- -0.0297 -- 0.199 14.6 -- -- -- --
70.07 0.392 12.7 0.129 1.16 -- -- -- 0.199 14.6 -- -- -- --
107.32 0.482 12.7 0.174 -- -1.43 -- -- 0.22 -- 284.4 1127 -- --
57.87 0.354 12.7 -- 0.992 -0.88 -- -- 0.207 15.1 137.2 1125 -- --
148.76 0.57 12.7 0.0793 -- -- -- -- 0.17 -- -- -- -- --
70.51 0.393 12.7 -- 1.16 -- -- -- 0.185 14.6 -- -- -- --
108.11 0.484 12.7 -- -- -1.42 -- -- 0.2 -- 327.6 1127 -- --
148.93 0.57 12.7 -- -- -- -- -- 0.161 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 55.64 humidity 80 1440 < th dose independent rect. 7 8
4 55.86 humidity 80 1440 > th dose independent rect. 7 8
13 56.11 humidity 80 1440 > th dose independent sin 2 NA
20 56.21 humidity 80 1440 < th dose independent sin 2 NA
29 56.32 humidity 80 1440 > th dose independent rect. 2 14
50 56.54 humidity 70 720 > th dose dependent rect. 19 4
55 56.58 humidity 80 1440 > th dose independent rect. 7 14
73 56.71 humidity 80 1440 > th dose independent rect. 2 19
74 56.72 humidity 90 720 > th dose dependent rect. 20 3
89 56.80 humidity 80 1440 < th dose independent rect. 7 13
116 56.94 humidity 90 720 > th dose dependent rect. 20 1
147 57.11 radiation 20 1440 < th dose dependent rect. 11 2
197 57.57 radiation 10 1440 < th dose dependent rect. 9 6
205 57.66 humidity 70 720 > th dose dependent rect. 20 1
227 57.89 humidity 80 720 < th dose independent rect. 17 4
240 57.95 humidity 90 720 < th dose dependent rect. 17 18
243 57.97 humidity 80 1440 > th dose independent rect. 7 20
263 58.09 humidity 80 1440 > th dose independent rect. 19 22
269 58.11 radiation 10 1440 < th dose dependent rect. 8 10
286 58.15 radiation 10 1440 < th dose dependent rect. 8 16
293 58.16 humidity 90 720 < th dose dependent rect. 17 7
307 58.20 humidity 80 1440 > th dose independent rect. 11 23
308 58.20 humidity 90 720 < th dose dependent rect. 17 5
328 58.26 radiation 10 1440 > th dose independent rect. 11 2
337 58.28 humidity 80 1440 > th dose independent rect. 11 3
349 58.30 humidity 50 720 > th dose dependent rect. 15 17
350 58.30 humidity 90 1440 < th dose dependent rect. 18 22
352 58.31 radiation 10 1440 < th dose dependent sin 21 NA
354 58.32 humidity 80 1440 > th dose independent no NA NA
373 58.37 radiation 1 1440 < th dose independent rect. 11 1
374 58.37 radiation 1 1440 < th dose dependent rect. 11 1
376 58.38 humidity 80 1440 > th dose independent rect. 15 23
377 58.38 humidity 90 1440 < th dose dependent rect. 3 13
379 58.38 humidity 90 1440 < th dose dependent rect. 2 19
394 58.41 humidity 90 1440 < th dose dependent sin 0 NA
458 58.50 humidity 90 1440 < th dose dependent rect. 8 22
475 58.53 humidity 90 1440 < th dose dependent rect. 8 14
482 58.54 humidity 90 1440 < th dose dependent rect. 8 8
485 58.54 humidity 90 1440 < th dose dependent rect. 8 16
500 58.56 radiation 20 1440 < th dose independent rect. 11 2
504 58.56 humidity 90 1440 < th dose dependent rect. 11 3
508 58.56 humidity 50 1440 > th dose dependent rect. 8 16
529 58.58 humidity 90 1440 < th dose dependent no NA NA
532 58.58 humidity 50 1440 > th dose dependent rect. 8 14
535 58.58 humidity 50 1440 > th dose dependent rect. 3 19
543 58.58 humidity 90 1440 < th dose dependent rect. 5 23
548 58.59 humidity 90 720 < th dose dependent rect. 17 11
560 58.59 humidity 90 1440 < th dose dependent rect. 11 23
565 58.60 humidity 80 1440 < th dose independent rect. 19 22
596 58.63 humidity 50 1440 > th dose dependent sin 23 NA
611 58.64 humidity 50 1440 > th dose dependent rect. 11 3
627 58.64 humidity 90 1440 < th dose dependent rect. 15 23
665 58.67 humidity 50 1440 > th dose dependent rect. 8 21
694 58.70 humidity 50 1440 > th dose dependent rect. 8 8
697 58.70 radiation 20 1440 < th dose dependent rect. 11 14
713 58.72 humidity 80 1440 < th dose independent rect. 11 3
732 58.73 humidity 80 1440 < th dose independent rect. 16 23
776 58.76 humidity 50 1440 > th dose dependent rect. 18 22
787 58.78 humidity 50 1440 > th dose dependent rect. 3 13
831 58.82 humidity 80 1440 < th dose independent no NA NA
841 58.83 humidity 50 720 > th dose dependent sin 14 NA
936 58.89 humidity 50 1440 > th dose dependent rect. 20 23
952 58.91 humidity 80 1440 < th dose independent rect. 11 23
953 58.91 humidity 50 1440 > th dose dependent no NA NA