Os01g0622000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0622000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 78.2 | 0.415 | 10.3 | 0.334 | 1.64 | -1.14 | -1.02 | -0.149 | 0.17 | 16 | 3.869 | 114 | -- | -- |
| 78.23 | 0.412 | 10.3 | 0.337 | 1.6 | -1.18 | -0.908 | -- | 0.168 | 16 | 3.697 | 118 | -- | -- |
| 79.93 | 0.416 | 10.3 | 0.319 | 1.62 | -1.14 | -- | 0.313 | 0.166 | 15.9 | 3.809 | 123 | -- | -- |
| 80.48 | 0.418 | 10.3 | 0.317 | 1.61 | -1.14 | -- | -- | 0.169 | 15.9 | 3.89 | 123 | -- | -- |
| 101.19 | 0.469 | 10.3 | 0.187 | -- | -2.29 | -- | 0.519 | 0.137 | -- | 2.459 | 335 | -- | -- |
| 94.18 | 0.455 | 10.2 | 0.376 | 2.72 | -- | -0.574 | -- | 0.243 | 14.6 | -- | -- | -- | -- |
| 95.35 | 0.457 | 10.2 | 0.361 | 2.71 | -- | -- | -- | 0.24 | 14.6 | -- | -- | -- | -- |
| 102.41 | 0.471 | 10.2 | 0.19 | -- | -2.28 | -- | -- | 0.137 | -- | 2.385 | 332 | -- | -- |
| 83.07 | 0.424 | 10.3 | -- | 1.56 | -1.19 | -- | -- | 0.133 | 16 | 3.201 | 128 | -- | -- |
| 527.5 | 1.07 | 10.2 | 0.246 | -- | -- | -- | -- | 0.172 | -- | -- | -- | -- | -- |
| 98.8 | 0.465 | 10.2 | -- | 2.71 | -- | -- | -- | 0.199 | 14.6 | -- | -- | -- | -- |
| 103.32 | 0.473 | 10.3 | -- | -- | -2.27 | -- | -- | 0.122 | -- | 2.114 | 332 | -- | -- |
| 529.1 | 1.07 | 10.2 | -- | -- | -- | -- | -- | 0.144 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 70.60 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 17 | 3 |
| 2 | 70.87 | temperature | 30.0 | 720 | < th | dose independent | rect. | 17 | 11 |
| 3 | 70.97 | temperature | 30.0 | 720 | < th | dose independent | rect. | 17 | 3 |
| 7 | 72.28 | humidity | 60.0 | 720 | > th | dose independent | rect. | 17 | 3 |
| 8 | 72.36 | radiation | 20.0 | 720 | < th | dose dependent | rect. | 16 | 5 |
| 9 | 72.38 | radiation | 20.0 | 720 | < th | dose dependent | rect. | 16 | 13 |
| 11 | 72.56 | humidity | 60.0 | 720 | > th | dose independent | rect. | 17 | 11 |
| 16 | 72.85 | radiation | 1.0 | 720 | < th | dose independent | rect. | 17 | 11 |
| 30 | 73.77 | humidity | 60.0 | 720 | > th | dose independent | rect. | 17 | 18 |
| 39 | 74.07 | radiation | 1.0 | 720 | < th | dose independent | rect. | 17 | 3 |
| 123 | 76.96 | humidity | 50.0 | 720 | > th | dose independent | rect. | 16 | 21 |
| 129 | 77.08 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 4 |
| 171 | 77.76 | radiation | 1.0 | 90 | < th | dose independent | rect. | 16 | 18 |
| 177 | 77.81 | radiation | 1.0 | 90 | < th | dose independent | rect. | 16 | 16 |
| 243 | 78.70 | radiation | 1.0 | 90 | < th | dose independent | rect. | 23 | 23 |
| 260 | 78.81 | radiation | 10.0 | 720 | < th | dose dependent | sin | 14 | NA |
| 289 | 79.12 | radiation | 1.0 | 90 | < th | dose independent | rect. | 1 | 21 |
| 292 | 79.13 | temperature | 30.0 | 90 | < th | dose independent | rect. | 17 | 13 |
| 295 | 79.18 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 16 | 18 |
| 323 | 79.43 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 1 | 21 |
| 330 | 79.51 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 344 | 79.60 | humidity | 50.0 | 270 | > th | dose independent | rect. | 23 | 22 |
| 364 | 79.73 | wind | 1.0 | 720 | > th | dose independent | rect. | 14 | 9 |
| 371 | 79.77 | radiation | 1.0 | 720 | > th | dose dependent | rect. | 14 | 18 |
| 383 | 79.85 | humidity | 50.0 | 270 | > th | dose independent | rect. | 9 | 11 |
| 404 | 80.00 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 24 | 20 |
| 411 | 80.04 | radiation | 1.0 | 90 | > th | dose independent | no | NA | NA |
| 412 | 80.04 | radiation | 1.0 | 90 | > th | dose independent | rect. | 5 | 14 |
| 469 | 80.05 | radiation | 10.0 | 720 | > th | dose independent | rect. | 14 | 18 |
| 471 | 80.07 | radiation | 1.0 | 90 | < th | dose independent | no | NA | NA |
| 474 | 80.07 | radiation | 1.0 | 90 | < th | dose independent | rect. | 9 | 23 |
| 500 | 80.19 | radiation | 1.0 | 90 | < th | dose independent | rect. | 7 | 23 |
| 508 | 80.22 | humidity | 70.0 | 720 | < th | dose independent | rect. | 14 | 18 |
| 534 | 80.33 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 16 | 13 |
| 548 | 80.44 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 17 | 11 |
| 593 | 80.65 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 17 | 13 |
| 605 | 80.69 | humidity | 70.0 | 720 | > th | dose independent | rect. | 9 | 11 |
| 610 | 80.72 | humidity | 70.0 | 720 | < th | dose independent | rect. | 14 | 6 |
| 631 | 80.77 | radiation | 10.0 | 720 | > th | dose independent | rect. | 14 | 4 |
| 648 | 80.79 | radiation | 10.0 | 720 | > th | dose independent | sin | 14 | NA |
| 654 | 80.80 | wind | 1.0 | 30 | > th | dose dependent | rect. | 2 | 4 |
| 701 | 80.99 | wind | 1.0 | 10 | > th | dose dependent | rect. | 4 | 1 |
| 707 | 81.02 | humidity | 70.0 | 720 | > th | dose independent | rect. | 24 | 20 |
| 723 | 81.07 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 13 | 19 |
| 724 | 81.07 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 13 | 19 |
| 731 | 81.11 | humidity | 90.0 | 30 | < th | dose independent | rect. | 6 | 19 |
| 732 | 81.12 | humidity | 70.0 | 720 | > th | dose independent | sin | 14 | NA |
| 746 | 81.14 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 3 | 3 |
| 756 | 81.18 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 8 | 13 |
| 758 | 81.19 | humidity | 70.0 | 720 | > th | dose independent | rect. | 9 | 19 |
| 777 | 81.24 | humidity | 70.0 | 720 | > th | dose independent | rect. | 8 | 21 |
| 802 | 81.30 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 11 | 20 |
| 806 | 81.33 | humidity | 70.0 | 720 | < th | dose independent | sin | 14 | NA |
| 826 | 81.39 | radiation | 1.0 | 10 | < th | dose independent | rect. | 3 | 5 |
| 839 | 81.41 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 20 | 21 |
| 842 | 81.41 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 20 | 21 |
| 844 | 81.42 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 5 | 18 |
| 846 | 81.42 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 5 | 18 |
| 853 | 81.43 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 3 | 5 |
| 891 | 81.50 | radiation | 1.0 | 90 | < th | dose dependent | no | NA | NA |
| 904 | 81.53 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 5 | 20 |
| 906 | 81.53 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 5 | 20 |
| 939 | 81.61 | radiation | 1.0 | 90 | > th | dose independent | rect. | 16 | 23 |
| 960 | 81.65 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 7 | 23 |
| 962 | 81.66 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 11 | 14 |
| 964 | 81.66 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 11 | 14 |
| 969 | 81.68 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 5 | 22 |
| 997 | 81.75 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 23 | 7 |