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Os01g0621600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function DUF1221 domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.46 (0.0256) R2 : 0.441
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.18 (0.0642) R2dC : 0.438 R2C : 0.321
β3 : -1.13 (0.123) R2dE : 0.125 R2E : 0.00341
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0336 (0.0558) R2dN8 : 0.000702 R2N8 : -0.00459
σ : 0.475
deviance : 104.03
__
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C
peak time of C : 2.2
E
wheather : temperature
threshold : 24.1
memory length : 115
response mode : < th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
100.68 0.471 6.47 -0.322 1.2 -1.32 -0.214 -0.28 -0.0902 2.18 24.1 123 -- --
100.78 0.468 6.47 -0.349 1.19 -1.27 -0.296 -- -0.0905 2.17 24.1 122 -- --
100.82 0.468 6.47 -0.304 1.2 -1.34 -- -0.403 -0.0884 2.19 24.1 120 -- --
101.1 0.468 6.48 -0.35 1.19 -1.28 -- -- -0.0953 2.19 24.1 121 -- --
146.04 0.563 6.47 -0.377 -- -1.52 -- -0.377 -0.098 -- 39.56 1091 -- --
123.43 0.521 6.43 -0.0527 1.01 -- -0.254 -- 0.113 2.24 -- -- -- --
123.66 0.521 6.43 -0.0455 1.01 -- -- -- 0.114 2.26 -- -- -- --
146.1 0.563 6.48 -0.453 -- -1.52 -- -- -0.125 -- 48.26 1098 -- --
104.03 0.475 6.46 -- 1.18 -1.13 -- -- -0.0336 2.2 24.1 115 -- --
184.68 0.635 6.42 -0.00292 -- -- -- -- 0.139 -- -- -- -- --
123.72 0.52 6.43 -- 1.01 -- -- -- 0.12 2.26 -- -- -- --
150.84 0.572 6.46 -- -- -1.33 -- -- -0.048 -- 45.07 1092 -- --
184.68 0.634 6.42 -- -- -- -- -- 0.139 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 98.26 temperature 30 720 < th dose dependent rect. 18 3
2 98.96 temperature 20 720 > th dose dependent rect. 18 7
4 99.10 temperature 15 1440 > th dose dependent rect. 11 1
8 99.24 humidity 60 1440 > th dose dependent rect. 11 1
13 99.41 radiation 40 4320 < th dose dependent rect. 20 10
16 99.44 humidity 50 14400 < th dose dependent rect. 16 1
17 99.44 radiation 30 4320 < th dose dependent rect. 24 6
25 99.50 radiation 20 4320 < th dose dependent rect. 2 4
31 99.55 temperature 20 720 > th dose dependent sin 14 NA
34 99.55 humidity 50 14400 < th dose dependent rect. 16 18
45 99.65 temperature 30 720 < th dose dependent rect. 18 7
53 99.69 radiation 20 4320 < th dose dependent rect. 4 2
70 99.78 temperature 10 1440 > th dose dependent rect. 10 7
89 99.86 temperature 15 720 > th dose dependent rect. 15 10
108 99.92 wind 9 14400 < th dose independent rect. 16 1
139 100.03 radiation 1 4320 > th dose dependent rect. 4 2
157 100.05 temperature 20 720 > th dose dependent rect. 21 2
176 100.11 radiation 40 14400 < th dose independent rect. 8 1
184 100.15 humidity 70 14400 < th dose independent rect. 19 3
249 100.28 temperature 30 720 < th dose dependent sin 15 NA
260 100.32 humidity 50 14400 < th dose independent rect. 17 17
262 100.32 temperature 20 720 > th dose dependent rect. 15 15
271 100.35 radiation 30 14400 < th dose independent rect. 15 17
279 100.40 radiation 20 14400 < th dose independent rect. 16 15
289 100.42 humidity 50 14400 < th dose independent rect. 16 1
295 100.44 temperature 25 10 < th dose dependent sin 6 NA
297 100.44 temperature 25 10 < th dose dependent rect. 18 20
298 100.47 temperature 20 10 > th dose dependent sin 9 NA
301 100.48 humidity 50 14400 > th dose independent rect. 17 16
306 100.50 radiation 1 1440 > th dose independent rect. 15 15
307 100.50 temperature 10 1440 > th dose dependent rect. 16 1
309 100.51 radiation 1 1440 > th dose independent rect. 8 23
333 100.60 wind 9 14400 > th dose independent rect. 16 1
343 100.63 radiation 20 1440 < th dose dependent rect. 15 15
355 100.66 temperature 10 1440 > th dose dependent sin 23 NA
360 100.67 humidity 50 14400 > th dose independent rect. 16 18
361 100.67 wind 9 14400 > th dose dependent rect. 16 1
362 100.67 radiation 20 1440 < th dose dependent rect. 16 1
367 100.67 temperature 10 720 > th dose dependent rect. 13 14
376 100.70 radiation 1 14400 > th dose dependent rect. 17 2
387 100.71 temperature 25 720 < th dose independent rect. 18 4
388 100.71 radiation 40 14400 < th dose independent rect. 24 9
390 100.71 radiation 40 14400 > th dose dependent rect. 8 1
392 100.71 radiation 40 14400 > th dose dependent rect. 15 18
396 100.73 radiation 40 14400 < th dose independent rect. 20 13
399 100.73 radiation 40 14400 < th dose dependent rect. 17 10
404 100.74 wind 5 43200 < th dose independent rect. 20 2
408 100.74 radiation 40 14400 < th dose dependent rect. 17 4
413 100.75 radiation 40 14400 < th dose independent rect. 17 16
415 100.75 radiation 20 14400 < th dose dependent rect. 17 4
418 100.75 radiation 40 14400 < th dose dependent rect. 17 8
423 100.76 radiation 40 14400 < th dose independent rect. 2 7
433 100.76 radiation 20 14400 < th dose dependent rect. 17 8
442 100.77 radiation 20 14400 < th dose dependent rect. 17 2
451 100.78 radiation 40 14400 < th dose independent rect. 6 3
479 100.80 radiation 1 43200 > th dose independent rect. 18 11
485 100.81 radiation 40 14400 < th dose independent rect. 4 5
540 100.86 humidity 90 1440 < th dose dependent rect. 11 1
547 100.87 wind 5 43200 > th dose independent rect. 20 2
548 100.87 temperature 25 720 < th dose independent rect. 16 7
551 100.87 humidity 70 14400 < th dose dependent rect. 18 3
576 100.91 radiation 1 43200 > th dose independent rect. 18 1
614 100.99 atmosphere 1005 43200 < th dose independent rect. 17 1
636 101.03 radiation 1 4320 < th dose independent rect. 15 16
645 101.05 radiation 1 1440 < th dose independent rect. 8 23
646 101.05 radiation 20 1440 < th dose dependent rect. 15 6
647 101.05 radiation 20 1440 < th dose dependent rect. 15 12
656 101.06 radiation 20 1440 < th dose dependent rect. 15 4
661 101.06 radiation 20 1440 < th dose dependent rect. 15 10
668 101.07 temperature 25 90 < th dose dependent rect. 16 22
669 101.08 atmosphere 1010 43200 < th dose independent rect. 7 1
670 101.08 atmosphere 1005 43200 > th dose independent rect. 16 3
692 101.10 radiation 10 4320 > th dose dependent rect. 16 16
706 101.12 temperature 25 10 < th dose dependent rect. 16 22
730 101.15 radiation 10 14400 < th dose independent rect. 16 9
732 101.15 radiation 10 14400 < th dose independent rect. 16 11
738 101.16 radiation 10 14400 < th dose independent rect. 16 3
765 101.18 radiation 30 14400 < th dose independent rect. 15 12
775 101.19 radiation 30 14400 < th dose independent rect. 15 2
777 101.19 temperature 25 720 > th dose independent rect. 18 5
778 101.19 radiation 30 14400 < th dose independent rect. 15 6
780 101.19 radiation 30 14400 < th dose independent rect. 15 10
822 101.24 radiation 1 1440 > th dose independent rect. 15 23
860 101.28 radiation 1 4320 > th dose independent sin 13 NA
868 101.29 radiation 1 1440 > th dose independent rect. 15 21
872 101.29 temperature 10 720 > th dose dependent rect. 11 16
931 101.39 radiation 1 1440 > th dose independent rect. 13 22
935 101.40 temperature 30 1440 < th dose dependent rect. 11 1
967 101.42 temperature 25 90 < th dose dependent rect. 9 23
982 101.44 radiation 40 1440 < th dose dependent rect. 16 1
995 101.45 temperature 30 1440 < th dose dependent rect. 7 10
1000 101.45 temperature 25 90 < th dose dependent rect. 21 23