Os01g0621400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0621400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 195.13 | 0.656 | 5.85 | 0.773 | 0.489 | -1.72 | 0.836 | -0.331 | -0.237 | 7.97 | 21.4 | 901 | -- | -- |
| 193.85 | 0.648 | 5.83 | 0.795 | 0.563 | -1.6 | 0.992 | -- | -0.174 | 7.86 | 21.9 | 1031 | -- | -- |
| 196.3 | 0.653 | 5.84 | 0.752 | 0.508 | -1.58 | -- | -0.306 | -0.215 | 8.11 | 21.99 | 974 | -- | -- |
| 196.53 | 0.653 | 5.83 | 0.816 | 0.543 | -1.59 | -- | -- | -0.182 | 8.1 | 21.98 | 999 | -- | -- |
| 208.48 | 0.672 | 5.85 | 0.694 | -- | -1.65 | -- | -0.394 | -0.188 | -- | 22 | 837 | -- | -- |
| 290.16 | 0.799 | 5.94 | 0.214 | 0.743 | -- | 0.757 | -- | -0.686 | 8.94 | -- | -- | -- | -- |
| 292.03 | 0.8 | 5.94 | 0.242 | 0.738 | -- | -- | -- | -0.685 | 9.14 | -- | -- | -- | -- |
| 208.94 | 0.673 | 5.84 | 0.811 | -- | -1.65 | -- | -- | -0.16 | -- | 21.92 | 837 | -- | -- |
| 211.02 | 0.677 | 5.85 | -- | 0.56 | -1.36 | -- | -- | -0.3 | 8.02 | 22.3 | 974 | -- | -- |
| 323.5 | 0.84 | 5.96 | 0.24 | -- | -- | -- | -- | -0.681 | -- | -- | -- | -- | -- |
| 293.58 | 0.801 | 5.94 | -- | 0.738 | -- | -- | -- | -0.712 | 9.11 | -- | -- | -- | -- |
| 224.01 | 0.697 | 5.87 | -- | -- | -1.42 | -- | -- | -0.281 | -- | 22.21 | 768 | -- | -- |
| 325.01 | 0.841 | 5.96 | -- | -- | -- | -- | -- | -0.707 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 182.85 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 6 | 190.37 | temperature | 10 | 270 | > th | dose dependent | sin | 8 | NA |
| 12 | 193.97 | temperature | 30 | 270 | < th | dose dependent | rect. | 22 | 22 |
| 15 | 194.84 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 17 |
| 39 | 196.41 | temperature | 30 | 270 | < th | dose dependent | sin | 8 | NA |
| 40 | 196.46 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 67 | 197.39 | temperature | 25 | 720 | < th | dose dependent | sin | 11 | NA |
| 89 | 198.48 | temperature | 25 | 720 | < th | dose dependent | rect. | 11 | 23 |
| 91 | 198.59 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 93 | 198.60 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 6 |
| 101 | 198.79 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 110 | 199.01 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 9 |
| 127 | 199.48 | temperature | 10 | 270 | > th | dose dependent | rect. | 4 | 23 |
| 139 | 199.75 | temperature | 25 | 720 | < th | dose dependent | rect. | 4 | 23 |
| 147 | 199.94 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 6 |
| 177 | 200.65 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 14 |
| 202 | 201.39 | temperature | 25 | 1440 | < th | dose dependent | sin | 14 | NA |
| 280 | 202.67 | temperature | 10 | 1440 | > th | dose dependent | rect. | 24 | 2 |
| 310 | 203.10 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 319 | 203.14 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 4 |
| 358 | 203.73 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 3 |
| 411 | 204.24 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 13 |
| 448 | 204.70 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 6 |
| 545 | 205.49 | temperature | 15 | 720 | > th | dose dependent | rect. | 21 | 10 |
| 637 | 206.12 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 639 | 206.13 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 648 | 206.20 | temperature | 30 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 746 | 206.90 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 844 | 207.49 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 10 |
| 852 | 207.53 | temperature | 30 | 270 | < th | dose dependent | rect. | 23 | 12 |
| 905 | 207.98 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 969 | 208.27 | temperature | 15 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 982 | 208.33 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 13 |