Os01g0621200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Amino acid/polyamine transporter II family protein.
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Os01g0621200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Amino acid/polyamine transporter II family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 202.23 | 0.668 | 5.7 | 2.29 | 3.96 | -5.58 | 0.161 | 5.87 | 0.387 | 7.18 | 10.9 | 316 | 0.133 | -- |
| 222.88 | 0.695 | 5.76 | 1.76 | 3.31 | -5.06 | 3.48 | -- | 0.272 | 7.45 | 11.86 | 344 | 3.9e-05 | -- |
| 202.23 | 0.662 | 5.7 | 2.31 | 3.91 | -5.53 | -- | 6.05 | 0.396 | 7.18 | 11.01 | 320 | 0.143 | -- |
| 260.09 | 0.751 | 5.78 | 1.71 | 3.3 | -4.97 | -- | -- | 0.218 | 7.3 | 11.76 | 341 | 3.93e-06 | -- |
| 361.56 | 0.886 | 5.71 | 3.03 | -- | -4.63 | -- | 8.25 | 0.766 | -- | 22.55 | 377 | 0.361 | -- |
| 403.46 | 0.942 | 6.01 | 1.01 | 1.92 | -- | -1.18 | -- | -0.326 | 1.52 | -- | -- | -- | -- |
| 408.62 | 0.947 | 6.01 | 1.05 | 1.93 | -- | -- | -- | -0.321 | 1.7 | -- | -- | -- | -- |
| 301.74 | 0.809 | 5.86 | 1.68 | -- | -3.6 | -- | -- | 0.19 | -- | 11.02 | 847 | 0.433 | -- |
| 333.15 | 0.85 | 5.85 | -- | 3.38 | -4.61 | -- | -- | -0.0609 | 6.88 | 9.906 | 310 | 0.00094 | -- |
| 634.88 | 1.18 | 5.98 | 1.13 | -- | -- | -- | -- | -0.278 | -- | -- | -- | -- | -- |
| 437.55 | 0.978 | 6.03 | -- | 1.95 | -- | -- | -- | -0.438 | 1.71 | -- | -- | -- | -- |
| 375.04 | 0.902 | 5.95 | -- | -- | -3.23 | -- | -- | -0.127 | -- | 7.874 | 815 | 2.69e-05 | -- |
| 668.31 | 1.21 | 6.01 | -- | -- | -- | -- | -- | -0.403 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 204.04 | temperature | 10 | 270 | > th | dose dependent | sin | 6 | NA |
| 9 | 217.13 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 11 |
| 10 | 219.40 | temperature | 30 | 270 | < th | dose dependent | sin | 6 | NA |
| 25 | 229.01 | temperature | 15 | 270 | > th | dose dependent | rect. | 23 | 15 |
| 33 | 230.65 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 9 |
| 37 | 231.36 | temperature | 10 | 720 | > th | dose dependent | rect. | 20 | 14 |
| 62 | 236.81 | temperature | 10 | 720 | > th | dose dependent | sin | 9 | NA |
| 260 | 253.80 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 17 |
| 276 | 254.99 | temperature | 20 | 720 | > th | dose independent | rect. | 24 | 16 |
| 298 | 256.10 | temperature | 20 | 720 | > th | dose independent | sin | 5 | NA |
| 379 | 259.63 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 9 |
| 465 | 262.47 | temperature | 30 | 720 | < th | dose dependent | rect. | 23 | 6 |
| 469 | 262.54 | temperature | 30 | 270 | < th | dose dependent | rect. | 23 | 20 |
| 514 | 263.52 | temperature | 20 | 720 | > th | dose independent | sin | 8 | NA |
| 947 | 274.14 | temperature | 20 | 720 | < th | dose independent | rect. | 24 | 15 |
| 950 | 274.26 | temperature | 30 | 90 | < th | dose dependent | rect. | 17 | 19 |