Os01g0615500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : ABC transporter related domain containing protein.
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Os01g0615500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : ABC transporter related domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 211.51 | 0.683 | 8.76 | 0.236 | 1.22 | 1.15 | 0.561 | 2.26 | -0.706 | 12.5 | 998.9 | 4686 | -- | -- |
| 215.27 | 0.683 | 8.78 | 0.149 | 1.21 | 1.49 | 0.564 | -- | -0.684 | 12.5 | 999 | 4784 | -- | -- |
| 212.84 | 0.679 | 8.75 | 0.252 | 1.21 | 1.15 | -- | 2.24 | -0.703 | 12.6 | 998.9 | 4730 | -- | -- |
| 216.69 | 0.686 | 8.78 | 0.163 | 1.21 | 1.48 | -- | -- | -0.691 | 12.6 | 998.9 | 4799 | -- | -- |
| 305.51 | 0.814 | 8.77 | 0.275 | -- | 1.16 | -- | 2.21 | -0.702 | -- | 998.8 | 4599 | -- | -- |
| 271.51 | 0.772 | 8.81 | 0.395 | 1.22 | -- | 0.514 | -- | -0.822 | 12.5 | -- | -- | -- | -- |
| 272.64 | 0.773 | 8.81 | 0.415 | 1.22 | -- | -- | -- | -0.819 | 12.6 | -- | -- | -- | -- |
| 308.39 | 0.818 | 8.8 | 0.12 | -- | 1.51 | -- | -- | -0.711 | -- | 998.9 | 4730 | -- | -- |
| 217.39 | 0.687 | 8.78 | -- | 1.2 | 1.49 | -- | -- | -0.703 | 12.6 | 998.9 | 4810 | -- | -- |
| 365.53 | 0.893 | 8.83 | 0.372 | -- | -- | -- | -- | -0.84 | -- | -- | -- | -- | -- |
| 277.17 | 0.779 | 8.82 | -- | 1.21 | -- | -- | -- | -0.865 | 12.6 | -- | -- | -- | -- |
| 308.76 | 0.818 | 8.8 | -- | -- | 1.53 | -- | -- | -0.716 | -- | 998.9 | 4740 | -- | -- |
| 369.17 | 0.897 | 8.84 | -- | -- | -- | -- | -- | -0.881 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 189.25 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 2 | 194.90 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 3 | 197.59 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 4 | 197.59 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 5 | 201.36 | wind | 7.0 | 4320 | > th | dose independent | rect. | 20 | 7 |
| 6 | 201.61 | wind | 7.0 | 4320 | < th | dose independent | rect. | 20 | 7 |
| 7 | 202.18 | wind | 7.0 | 4320 | > th | dose independent | rect. | 20 | 5 |
| 9 | 202.30 | wind | 7.0 | 4320 | < th | dose independent | rect. | 20 | 5 |
| 10 | 202.43 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 20 | 6 |
| 14 | 203.15 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 19 | 205.07 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 20 | 205.23 | wind | 7.0 | 4320 | > th | dose independent | rect. | 20 | 2 |
| 21 | 205.37 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 20 | 2 |
| 24 | 205.93 | wind | 7.0 | 4320 | < th | dose independent | rect. | 20 | 2 |
| 28 | 206.84 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 3 |
| 29 | 206.93 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 33 | 207.36 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 23 | 5 |
| 39 | 207.76 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 3 | 1 |
| 46 | 208.29 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 3 | 1 |
| 59 | 209.12 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 1 |
| 60 | 209.15 | atmosphere | 1000.0 | 4320 | < th | dose independent | rect. | 11 | 2 |
| 66 | 209.23 | atmosphere | 1000.0 | 4320 | > th | dose independent | rect. | 11 | 2 |
| 78 | 209.72 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 23 | 6 |
| 107 | 210.47 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 154 | 211.24 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 162 | 211.28 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 199 | 211.47 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 241 | 211.89 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 16 | 4 |
| 259 | 212.18 | atmosphere | 1005.0 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 319 | 212.41 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 11 | 9 |
| 351 | 212.62 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 8 | 12 |
| 408 | 213.06 | wind | 9.0 | 4320 | < th | dose independent | rect. | 17 | 4 |
| 411 | 213.10 | wind | 9.0 | 4320 | < th | dose independent | rect. | 17 | 11 |
| 421 | 213.24 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 17 | 11 |
| 426 | 213.30 | atmosphere | 1000.0 | 4320 | < th | dose independent | sin | 4 | NA |
| 464 | 213.38 | wind | 9.0 | 4320 | < th | dose independent | rect. | 17 | 8 |
| 497 | 213.49 | atmosphere | 1000.0 | 4320 | > th | dose independent | sin | 4 | NA |
| 522 | 213.71 | wind | 9.0 | 4320 | > th | dose independent | rect. | 17 | 4 |
| 530 | 213.74 | atmosphere | 1000.0 | 4320 | < th | dose independent | rect. | 19 | 19 |
| 571 | 213.99 | atmosphere | 1000.0 | 4320 | > th | dose independent | rect. | 19 | 18 |
| 577 | 214.04 | wind | 9.0 | 4320 | > th | dose independent | rect. | 17 | 11 |
| 629 | 214.27 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 656 | 214.34 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 658 | 214.34 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 677 | 214.48 | atmosphere | 1000.0 | 4320 | < th | dose dependent | rect. | 11 | 2 |
| 693 | 214.55 | wind | 9.0 | 4320 | > th | dose independent | rect. | 17 | 9 |
| 730 | 214.80 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 21 | 4 |
| 745 | 214.88 | atmosphere | 1000.0 | 4320 | < th | dose independent | rect. | 2 | 19 |
| 747 | 214.88 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 824 | 215.35 | atmosphere | 1000.0 | 4320 | > th | dose independent | rect. | 2 | 19 |
| 848 | 215.43 | atmosphere | 1000.0 | 4320 | < th | dose dependent | rect. | 4 | 10 |
| 903 | 215.61 | atmosphere | 1005.0 | 4320 | < th | dose dependent | rect. | 24 | 11 |
| 929 | 215.67 | atmosphere | 1005.0 | 4320 | < th | dose dependent | rect. | 24 | 1 |