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Os01g0615300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Transferase family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.1 (0.0168) R2 : 0.0112
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0801 (0.0353) R2dN8 : 0.0144 R2N8 : 0.0112
σ : 0.316
deviance : 45.73
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
41.36 0.302 10.1 -0.0484 0.231 0.336 -0.301 -1.11 0.131 19.2 91.28 249 -- --
42.88 0.305 10.1 -0.0643 0.239 0.306 0.0498 -- 0.124 19.2 90.93 275 -- --
41.53 0.3 10.1 -0.048 0.232 0.338 -- -0.976 0.132 19 91.54 194 -- --
42.87 0.305 10.1 -0.0721 0.248 0.3 -- -- 0.122 19.3 91 289 -- --
43.55 0.307 10.1 -0.0413 -- 0.177 -- -0.974 0.103 -- 91.53 148 -- --
44.27 0.312 10.1 -0.0465 0.156 -- -0.0851 -- 0.0764 20.8 -- -- -- --
44.3 0.312 10.1 -0.0436 0.156 -- -- -- 0.0765 20.8 -- -- -- --
44.98 0.312 10.1 -0.0646 -- 0.13 -- -- 0.0988 -- 89 8 -- --
43 0.305 10.1 -- 0.244 0.293 -- -- 0.127 19.3 91.12 301 -- --
45.68 0.316 10.1 -0.0438 -- -- -- -- 0.0753 -- -- -- -- --
44.35 0.312 10.1 -- 0.156 -- -- -- 0.0814 20.7 -- -- -- --
45.08 0.313 10.1 -- -- 0.123 -- -- 0.104 -- 88.8 8 -- --
45.73 0.316 10.1 -- -- -- -- -- 0.0801 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 39.49 wind 5.0 1440 < th dose independent rect. 14 1
2 39.50 wind 5.0 1440 > th dose independent rect. 14 1
5 40.17 wind 3.0 1440 > th dose dependent rect. 14 1
6 40.31 humidity 50.0 270 > th dose independent rect. 10 21
8 40.54 humidity 90.0 10 < th dose independent rect. 18 18
9 40.55 wind 5.0 720 < th dose independent rect. 15 4
11 40.57 wind 9.0 1440 < th dose dependent rect. 14 1
15 40.62 radiation 1.0 1440 < th dose independent rect. 11 1
16 40.62 radiation 1.0 1440 < th dose dependent rect. 11 1
18 40.63 atmosphere 1005.0 30 > th dose independent rect. 18 11
19 40.64 temperature 30.0 4320 > th dose dependent rect. 8 1
35 40.70 wind 5.0 90 < th dose independent rect. 16 20
43 40.76 wind 7.0 720 < th dose independent rect. 16 18
44 40.76 atmosphere 1010.0 10 < th dose dependent rect. 12 20
52 40.81 wind 5.0 270 < th dose independent rect. 14 21
76 40.90 radiation 20.0 4320 < th dose independent rect. 10 1
78 40.90 humidity 50.0 270 > th dose independent rect. 11 19
86 40.93 precipitation 0.1 270 > th dose independent rect. 2 2
88 40.93 precipitation 0.1 270 > th dose dependent rect. 2 2
90 40.95 wind 5.0 720 < th dose independent rect. 17 1
94 40.98 wind 9.0 720 < th dose dependent rect. 15 4
96 41.02 humidity 50.0 270 > th dose dependent rect. 19 11
99 41.04 radiation 20.0 4320 > th dose independent rect. 10 1
100 41.04 humidity 90.0 10 < th dose independent rect. 18 12
101 41.05 radiation 1.0 1440 > th dose independent rect. 10 3
122 41.11 temperature 30.0 4320 > th dose independent rect. 8 1
134 41.11 precipitation 0.1 720 < th dose independent rect. 7 12
139 41.11 precipitation 0.1 720 < th dose dependent rect. 7 12
141 41.12 wind 7.0 10 < th dose independent rect. 18 18
158 41.14 wind 7.0 720 < th dose independent rect. 14 14
162 41.16 wind 7.0 720 < th dose independent rect. 7 12
172 41.17 wind 5.0 90 < th dose independent rect. 8 11
175 41.18 wind 7.0 720 < th dose independent rect. 7 20
184 41.20 wind 7.0 270 < th dose independent rect. 15 11
188 41.22 wind 7.0 720 < th dose independent rect. 22 6
189 41.22 humidity 90.0 270 < th dose independent rect. 15 20
193 41.23 humidity 90.0 270 < th dose independent rect. 16 18
195 41.23 humidity 90.0 10 < th dose independent rect. 7 23
198 41.24 temperature 15.0 720 > th dose independent rect. 7 12
201 41.24 humidity 90.0 270 > th dose dependent sin 12 NA
202 41.24 radiation 20.0 10 < th dose dependent sin 14 NA
206 41.26 atmosphere 995.0 270 > th dose independent rect. 14 22
209 41.27 wind 1.0 720 < th dose independent rect. 23 2
221 41.28 radiation 30.0 4320 < th dose dependent rect. 10 1
225 41.29 temperature 30.0 4320 < th dose independent rect. 2 7
230 41.29 humidity 90.0 270 > th dose dependent rect. 10 21
243 41.31 wind 1.0 1440 > th dose independent rect. 23 2
269 41.32 atmosphere 1015.0 10 < th dose dependent rect. 12 6
271 41.33 humidity 50.0 90 > th dose independent rect. 12 5
279 41.34 temperature 30.0 4320 < th dose independent rect. 7 2
281 41.34 humidity 50.0 10 > th dose independent rect. 12 6
282 41.34 radiation 1.0 1440 > th dose independent rect. 8 7
283 41.34 humidity 60.0 720 > th dose independent rect. 19 12
284 41.34 radiation 20.0 720 < th dose independent rect. 19 12
285 41.34 temperature 15.0 10 > th dose independent rect. 18 18
287 41.34 radiation 1.0 270 > th dose independent rect. 15 21
290 41.34 humidity 90.0 270 > th dose dependent rect. 17 13
299 41.35 wind 7.0 720 < th dose independent rect. 16 9
300 41.35 humidity 90.0 10 < th dose independent rect. 20 16
303 41.35 wind 7.0 720 < th dose independent rect. 22 21
313 41.36 wind 1.0 1440 < th dose independent rect. 6 2
314 41.36 wind 9.0 10 < th dose independent rect. 12 6
318 41.36 temperature 10.0 720 > th dose independent rect. 19 12
319 41.36 temperature 30.0 720 < th dose independent rect. 19 12
321 41.36 atmosphere 995.0 720 > th dose independent rect. 19 12
322 41.36 atmosphere 1015.0 720 < th dose independent rect. 7 12
328 41.36 wind 1.0 1440 < th dose dependent rect. 6 2
336 41.37 atmosphere 995.0 270 > th dose independent rect. 6 13
337 41.37 atmosphere 1005.0 30 > th dose independent rect. 18 18
338 41.37 wind 5.0 90 < th dose independent rect. 7 22
350 41.37 humidity 90.0 270 > th dose dependent rect. 20 10
377 41.39 radiation 1.0 270 > th dose independent rect. 16 19
389 41.40 humidity 90.0 10 < th dose independent rect. 24 12
391 41.40 atmosphere 1005.0 30 < th dose independent rect. 13 19
394 41.40 radiation 1.0 10 > th dose dependent sin 13 NA
434 41.43 radiation 1.0 10 > th dose independent rect. 12 21
447 41.44 atmosphere 1015.0 270 < th dose dependent rect. 12 3
471 41.46 radiation 1.0 1440 > th dose independent rect. 12 1
472 41.46 temperature 20.0 10 > th dose independent rect. 9 3
476 41.46 radiation 1.0 1440 < th dose independent rect. 8 7
487 41.46 radiation 1.0 1440 < th dose dependent rect. 8 7
496 41.47 humidity 90.0 10 < th dose independent rect. 9 3
514 41.48 radiation 1.0 1440 < th dose independent rect. 13 2
518 41.48 radiation 1.0 1440 < th dose dependent rect. 13 2
531 41.49 radiation 30.0 720 < th dose independent rect. 15 4
534 41.49 temperature 30.0 4320 < th dose independent rect. 20 13
536 41.49 atmosphere 995.0 10 > th dose independent rect. 18 18
548 41.50 radiation 1.0 1440 > th dose independent rect. 12 3
550 41.50 temperature 10.0 10 > th dose independent rect. 12 6
552 41.50 atmosphere 1015.0 10 < th dose independent rect. 12 6
554 41.50 wind 9.0 720 < th dose independent rect. 19 12
577 41.51 wind 7.0 270 < th dose independent rect. 12 2
588 41.51 temperature 15.0 270 > th dose dependent rect. 12 1
590 41.51 humidity 90.0 720 > th dose dependent rect. 20 4
600 41.52 radiation 1.0 270 > th dose independent rect. 7 3
606 41.52 precipitation 0.1 10 < th dose independent rect. 12 6
608 41.52 atmosphere 995.0 270 > th dose independent rect. 15 11
613 41.52 atmosphere 995.0 270 > th dose independent rect. 15 20
615 41.52 humidity 90.0 270 > th dose dependent no NA NA
616 41.52 radiation 40.0 90 < th dose dependent rect. 9 2
617 41.52 wind 9.0 270 < th dose dependent rect. 7 3
618 41.52 precipitation 0.1 10 < th dose dependent rect. 12 6
625 41.52 humidity 90.0 270 > th dose dependent rect. 5 23
630 41.52 humidity 90.0 270 > th dose dependent rect. 20 23
633 41.53 temperature 30.0 270 < th dose independent rect. 7 3
661 41.54 wind 1.0 1440 > th dose independent rect. 6 2
663 41.54 wind 7.0 10 < th dose independent rect. 9 3
687 41.54 radiation 1.0 4320 > th dose dependent rect. 10 1
709 41.55 wind 1.0 90 > th dose independent rect. 17 12
710 41.55 wind 7.0 720 < th dose independent rect. 22 14
711 41.55 atmosphere 1015.0 10 < th dose independent rect. 18 18
712 41.55 wind 9.0 10 < th dose independent rect. 12 21
713 41.55 precipitation 0.1 10 < th dose independent rect. 12 21
723 41.55 precipitation 0.1 10 < th dose dependent rect. 12 21
727 41.55 humidity 90.0 30 > th dose dependent rect. 5 23
732 41.56 humidity 50.0 270 > th dose independent rect. 10 7
747 41.57 precipitation 0.1 720 < th dose independent rect. 15 4
751 41.57 atmosphere 995.0 90 > th dose independent rect. 17 19
754 41.57 precipitation 0.1 720 < th dose dependent rect. 15 4
758 41.57 humidity 90.0 30 > th dose dependent rect. 21 21
761 41.57 humidity 90.0 30 > th dose dependent rect. 1 23
763 41.58 radiation 10.0 270 > th dose independent rect. 12 2
773 41.58 radiation 40.0 270 < th dose dependent rect. 7 3
785 41.58 humidity 90.0 270 > th dose dependent rect. 3 23
790 41.59 radiation 1.0 270 > th dose dependent rect. 12 1
796 41.59 radiation 1.0 10 > th dose dependent rect. 15 16
800 41.59 humidity 90.0 30 > th dose dependent rect. 17 19
824 41.60 precipitation 0.1 720 < th dose independent rect. 22 21
825 41.60 humidity 90.0 30 > th dose dependent no NA NA
838 41.60 humidity 90.0 30 > th dose dependent rect. 11 21
840 41.60 precipitation 0.1 720 < th dose dependent rect. 22 21
854 41.60 humidity 90.0 30 > th dose dependent rect. 23 23
857 41.61 wind 1.0 10 > th dose independent rect. 9 3
858 41.61 humidity 90.0 270 < th dose independent rect. 7 3
868 41.61 humidity 50.0 10 > th dose independent rect. 12 21
870 41.61 temperature 15.0 270 > th dose independent rect. 14 22
885 41.61 humidity 90.0 30 > th dose dependent rect. 7 23
889 41.62 temperature 15.0 270 > th dose independent rect. 7 3
890 41.62 temperature 10.0 10 > th dose independent rect. 9 3
892 41.62 atmosphere 995.0 10 > th dose independent rect. 9 3
893 41.62 atmosphere 1015.0 10 < th dose independent rect. 9 3
894 41.62 precipitation 0.1 10 < th dose independent rect. 9 3
901 41.62 wind 1.0 90 > th dose independent rect. 17 19
902 41.62 temperature 10.0 10 > th dose independent rect. 12 21
904 41.62 precipitation 0.1 270 < th dose independent rect. 14 22
905 41.62 humidity 90.0 30 > th dose dependent sin 7 NA
909 41.62 precipitation 0.1 10 < th dose dependent rect. 9 3
911 41.62 temperature 15.0 90 > th dose dependent rect. 12 4
919 41.62 humidity 90.0 30 > th dose dependent rect. 20 16
920 41.62 humidity 90.0 30 > th dose dependent rect. 17 17
932 41.62 precipitation 0.1 270 < th dose dependent rect. 14 22
934 41.63 radiation 1.0 10 > th dose independent rect. 9 3
943 41.63 temperature 15.0 270 > th dose independent rect. 15 11
949 41.63 wind 1.0 270 < th dose dependent rect. 24 1
952 41.63 humidity 90.0 30 > th dose dependent rect. 17 15