Os01g0615200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Transferase family protein.
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Os01g0615200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Transferase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 37.71 | 0.289 | 12.8 | 0.521 | 0.431 | -0.399 | 0.559 | -2.91 | 0.397 | 15.6 | 11.77 | 347 | -- | -- |
| 42.43 | 0.303 | 12.7 | 0.983 | 0.381 | -0.442 | 0.0183 | -- | 0.531 | 15.8 | 11.25 | 531 | -- | -- |
| 38.14 | 0.288 | 12.8 | 0.559 | 0.383 | -0.375 | -- | -2.46 | 0.405 | 15.8 | 10.9 | 535 | -- | -- |
| 42.42 | 0.303 | 12.7 | 0.992 | 0.383 | -0.451 | -- | -- | 0.524 | 15.8 | 11.56 | 532 | -- | -- |
| 43.11 | 0.306 | 12.8 | 0.567 | -- | -0.434 | -- | -2.12 | 0.412 | -- | 13.72 | 1156 | -- | -- |
| 44.78 | 0.314 | 12.7 | 0.887 | 0.313 | -- | 0.0261 | -- | 0.457 | 14.7 | -- | -- | -- | -- |
| 44.78 | 0.313 | 12.7 | 0.888 | 0.313 | -- | -- | -- | 0.457 | 14.7 | -- | -- | -- | -- |
| 46.91 | 0.319 | 12.7 | 1.01 | -- | -0.462 | -- | -- | 0.53 | -- | 9.076 | 1131 | -- | -- |
| 65.39 | 0.379 | 12.7 | -- | 0.26 | 0.128 | -- | -- | 0.343 | 14.7 | 11.56 | 532 | -- | -- |
| 50.49 | 0.332 | 12.7 | 0.875 | -- | -- | -- | -- | 0.449 | -- | -- | -- | -- | -- |
| 65.57 | 0.379 | 12.7 | -- | 0.296 | -- | -- | -- | 0.358 | 14.7 | -- | -- | -- | -- |
| 60.02 | 0.361 | 12.8 | -- | -- | 0.525 | -- | -- | 0.195 | -- | 7.283 | 47520 | -- | -- |
| 70.67 | 0.392 | 12.7 | -- | -- | -- | -- | -- | 0.352 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 34.75 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 15 | 4 |
| 4 | 35.16 | radiation | 10.0 | 270 | > th | dose dependent | rect. | 16 | 15 |
| 7 | 35.25 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 16 | 2 |
| 8 | 35.28 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 13 | 22 |
| 11 | 35.31 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 16 | 6 |
| 12 | 35.33 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 4 | 15 |
| 15 | 35.39 | temperature | 25.0 | 270 | > th | dose independent | rect. | 15 | 4 |
| 34 | 35.60 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 16 | 4 |
| 46 | 35.69 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 14 | 20 |
| 50 | 35.73 | radiation | 10.0 | 270 | > th | dose independent | rect. | 16 | 15 |
| 72 | 35.87 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 15 | 20 |
| 83 | 36.00 | radiation | 30.0 | 43200 | < th | dose independent | rect. | 17 | 4 |
| 88 | 36.06 | radiation | 10.0 | 270 | > th | dose dependent | rect. | 16 | 1 |
| 105 | 36.13 | wind | 7.0 | 270 | < th | dose independent | rect. | 15 | 4 |
| 119 | 36.21 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 15 | 17 |
| 162 | 36.40 | radiation | 10.0 | 270 | > th | dose independent | rect. | 16 | 1 |
| 174 | 36.51 | temperature | 15.0 | 270 | > th | dose independent | rect. | 19 | 20 |
| 176 | 36.52 | wind | 7.0 | 30 | < th | dose independent | rect. | 16 | 4 |
| 202 | 36.59 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 7 | 4 |
| 218 | 36.66 | temperature | 30.0 | 270 | < th | dose independent | rect. | 10 | 15 |
| 236 | 36.73 | temperature | 30.0 | 270 | < th | dose independent | rect. | 19 | 20 |
| 243 | 36.75 | wind | 7.0 | 270 | < th | dose independent | rect. | 16 | 1 |
| 261 | 36.81 | temperature | 20.0 | 10 | > th | dose independent | rect. | 16 | 4 |
| 303 | 36.89 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 15 | 4 |
| 304 | 36.89 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 19 | 20 |
| 305 | 36.89 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 15 | 4 |
| 312 | 36.90 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 20 | 20 |
| 323 | 36.92 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 7 | 6 |
| 326 | 36.93 | wind | 7.0 | 270 | < th | dose independent | rect. | 15 | 17 |
| 331 | 36.95 | wind | 1.0 | 270 | > th | dose independent | rect. | 15 | 4 |
| 337 | 36.96 | radiation | 20.0 | 270 | > th | dose independent | rect. | 15 | 17 |
| 342 | 36.98 | wind | 7.0 | 270 | < th | dose independent | rect. | 14 | 19 |
| 356 | 37.01 | temperature | 10.0 | 270 | > th | dose independent | rect. | 15 | 4 |
| 358 | 37.01 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 15 | 4 |
| 360 | 37.01 | radiation | 40.0 | 270 | < th | dose independent | rect. | 15 | 4 |
| 362 | 37.01 | temperature | 25.0 | 720 | > th | dose dependent | sin | 7 | NA |
| 391 | 37.07 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 22 | 13 |
| 406 | 37.11 | temperature | 15.0 | 270 | > th | dose independent | rect. | 17 | 23 |
| 425 | 37.14 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 15 | 14 |
| 447 | 37.17 | wind | 9.0 | 270 | < th | dose dependent | rect. | 15 | 4 |
| 451 | 37.18 | wind | 9.0 | 270 | < th | dose independent | rect. | 19 | 20 |
| 467 | 37.21 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 19 | 20 |
| 468 | 37.21 | wind | 7.0 | 270 | < th | dose independent | rect. | 13 | 22 |
| 474 | 37.21 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 19 | 20 |
| 477 | 37.22 | temperature | 15.0 | 90 | > th | dose independent | rect. | 21 | 19 |
| 523 | 37.29 | temperature | 15.0 | 10 | > th | dose independent | rect. | 20 | 20 |
| 556 | 37.32 | radiation | 20.0 | 270 | < th | dose dependent | sin | 13 | NA |
| 559 | 37.33 | humidity | 50.0 | 270 | > th | dose independent | rect. | 10 | 15 |
| 589 | 37.37 | wind | 1.0 | 10 | > th | dose independent | rect. | 16 | 4 |
| 591 | 37.37 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 15 | 4 |
| 613 | 37.40 | wind | 3.0 | 270 | > th | dose independent | rect. | 16 | 1 |
| 616 | 37.40 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 16 | 4 |
| 620 | 37.40 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 16 | 4 |
| 642 | 37.43 | temperature | 10.0 | 10 | > th | dose independent | rect. | 16 | 4 |
| 644 | 37.43 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 16 | 4 |
| 646 | 37.43 | radiation | 30.0 | 10 | < th | dose independent | rect. | 16 | 4 |
| 665 | 37.45 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 20 | 20 |
| 674 | 37.45 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 20 | 20 |
| 701 | 37.48 | temperature | 20.0 | 270 | > th | dose dependent | sin | 19 | NA |
| 706 | 37.49 | temperature | 10.0 | 270 | > th | dose independent | rect. | 16 | 1 |
| 708 | 37.49 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 16 | 1 |
| 710 | 37.49 | radiation | 40.0 | 270 | < th | dose independent | rect. | 16 | 1 |
| 713 | 37.49 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 11 | 5 |
| 716 | 37.49 | temperature | 20.0 | 720 | > th | dose dependent | sin | 3 | NA |
| 741 | 37.52 | temperature | 30.0 | 270 | < th | dose independent | rect. | 9 | 6 |
| 743 | 37.52 | wind | 9.0 | 10 | < th | dose independent | rect. | 20 | 20 |
| 754 | 37.53 | humidity | 90.0 | 270 | < th | dose independent | rect. | 15 | 4 |
| 779 | 37.56 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 16 | 1 |
| 787 | 37.57 | wind | 9.0 | 270 | < th | dose dependent | rect. | 16 | 2 |
| 870 | 37.62 | temperature | 25.0 | 270 | > th | dose dependent | sin | 16 | NA |
| 881 | 37.63 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 8 | 1 |
| 910 | 37.65 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 16 | 4 |
| 926 | 37.66 | temperature | 10.0 | 720 | > th | dose dependent | sin | 2 | NA |
| 940 | 37.67 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 16 | 6 |
| 948 | 37.68 | temperature | 30.0 | 270 | > th | dose independent | sin | 11 | NA |
| 974 | 37.69 | humidity | 90.0 | 270 | < th | dose independent | rect. | 16 | 1 |
| 979 | 37.69 | temperature | 25.0 | 90 | > th | dose dependent | sin | 11 | NA |