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Os01g0612800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.7 (0.0199) R2 : 0.074
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.253 (0.0419) R2dN8 : 0.0955 R2N8 : 0.074
σ : 0.374
deviance : 64.36
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
51.23 0.336 10.7 -0.295 0.396 0.219 -0.13 1.28 -0.305 4.57 34.6 858 -- --
54.62 0.344 10.7 -0.33 0.388 0.268 -0.366 -- -0.304 5.04 32.08 874 -- --
51.26 0.333 10.7 -0.292 0.391 0.216 -- 1.31 -0.303 4.48 34.59 864 -- --
55.1 0.346 10.7 -0.367 0.38 0.275 -- -- -0.341 4.67 32.1 870 -- --
57.8 0.354 10.7 -0.251 -- 0.119 -- 1.32 -0.268 -- 33.26 972 -- --
56.88 0.354 10.7 -0.333 0.268 -- -0.647 -- -0.298 4.83 -- -- -- --
57.2 0.354 10.7 -0.333 0.28 -- -- -- -0.296 3.27 -- -- -- --
60.83 0.363 10.7 -0.26 -- 0.132 -- -- -0.305 -- 32.39 1180 -- --
58.72 0.357 10.7 -- 0.353 0.211 -- -- -0.317 4.56 32.84 870 -- --
61.63 0.367 10.7 -0.321 -- -- -- -- -0.288 -- -- -- -- --
60.12 0.363 10.7 -- 0.273 -- -- -- -0.259 3.27 -- -- -- --
63.24 0.37 10.7 -- -- 0.264 -- -- -0.251 -- 80 4318 -- --
64.36 0.374 10.7 -- -- -- -- -- -0.253 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 48.74 atmosphere 1005.0 30 > th dose independent rect. 5 14
12 49.80 temperature 30.0 270 < th dose independent rect. 2 15
15 50.07 wind 5.0 30 < th dose independent rect. 19 10
17 50.17 temperature 30.0 90 < th dose independent rect. 4 15
22 50.29 temperature 20.0 30 > th dose independent rect. 5 14
24 50.31 humidity 50.0 10 > th dose dependent rect. 5 14
28 50.34 humidity 80.0 43200 > th dose independent rect. 6 1
31 50.37 humidity 60.0 10 > th dose independent rect. 5 14
33 50.39 atmosphere 1005.0 10 > th dose independent rect. 5 18
40 50.45 atmosphere 995.0 10 > th dose dependent rect. 5 14
43 50.47 humidity 80.0 43200 < th dose independent rect. 6 1
45 50.51 wind 1.0 90 > th dose independent rect. 19 10
46 50.52 radiation 1.0 720 < th dose independent rect. 5 6
49 50.54 wind 7.0 720 < th dose independent rect. 8 9
64 50.63 wind 5.0 30 < th dose independent rect. 15 14
65 50.63 humidity 50.0 90 > th dose independent rect. 5 14
71 50.65 atmosphere 1010.0 10 < th dose independent rect. 5 15
74 50.68 precipitation 0.1 720 < th dose independent rect. 1 16
75 50.68 humidity 90.0 14400 > th dose dependent rect. 8 2
76 50.68 precipitation 0.1 720 < th dose dependent rect. 1 16
78 50.70 precipitation 0.1 720 > th dose dependent rect. 5 6
84 50.73 wind 7.0 720 < th dose independent rect. 5 22
85 50.74 atmosphere 1005.0 10 > th dose independent rect. 5 11
86 50.75 precipitation 0.1 720 > th dose independent rect. 5 6
95 50.77 precipitation 0.1 720 > th dose dependent rect. 5 4
98 50.79 precipitation 0.1 720 > th dose independent rect. 5 4
104 50.81 radiation 1.0 10 < th dose dependent rect. 20 10
110 50.83 wind 7.0 720 < th dose independent rect. 5 15
118 50.84 radiation 1.0 720 < th dose independent rect. 20 19
126 50.88 wind 9.0 10 < th dose dependent rect. 20 9
133 50.91 wind 1.0 14400 < th dose independent rect. 2 7
136 50.91 radiation 1.0 720 < th dose independent rect. 20 15
142 50.92 wind 1.0 14400 < th dose dependent rect. 2 7
147 50.94 atmosphere 1005.0 90 > th dose independent rect. 11 8
151 50.95 precipitation 0.1 10 < th dose independent rect. 20 9
155 50.95 precipitation 0.1 10 < th dose dependent rect. 20 9
157 50.97 wind 1.0 14400 > th dose independent rect. 2 7
174 51.00 temperature 10.0 10 > th dose independent rect. 20 9
175 51.00 temperature 30.0 10 < th dose independent rect. 20 9
176 51.00 humidity 50.0 10 > th dose independent rect. 20 9
179 51.00 atmosphere 995.0 10 > th dose independent rect. 20 9
180 51.00 radiation 1.0 10 < th dose independent rect. 20 9
186 51.00 temperature 10.0 10 > th dose independent rect. 5 15
189 51.00 radiation 30.0 10 < th dose dependent rect. 20 9
191 51.01 atmosphere 1005.0 30 > th dose independent sin 22 NA
209 51.03 radiation 30.0 270 < th dose independent rect. 2 14
211 51.04 precipitation 0.1 14400 > th dose independent rect. 7 1
217 51.04 precipitation 0.1 10 < th dose independent rect. 5 15
221 51.04 precipitation 0.1 14400 > th dose dependent rect. 7 1
223 51.04 precipitation 0.1 10 < th dose dependent rect. 5 15
239 51.08 atmosphere 1015.0 10 < th dose independent rect. 20 9
245 51.09 precipitation 0.1 720 < th dose independent sin 3 NA
249 51.09 precipitation 0.1 720 < th dose dependent sin 3 NA
252 51.09 radiation 40.0 270 < th dose dependent rect. 2 11
258 51.10 temperature 20.0 270 > th dose independent rect. 2 15
267 51.12 wind 5.0 270 < th dose independent rect. 13 13
281 51.13 temperature 20.0 270 > th dose independent rect. 2 19
286 51.14 temperature 10.0 10 > th dose dependent rect. 20 9
293 51.16 wind 7.0 270 < th dose independent rect. 15 11
305 51.17 radiation 30.0 270 < th dose independent rect. 2 11
317 51.18 radiation 40.0 10 < th dose independent rect. 5 14
319 51.18 humidity 60.0 90 > th dose dependent rect. 4 11
347 51.20 radiation 30.0 720 < th dose independent rect. 18 17
355 51.21 radiation 30.0 720 < th dose independent rect. 17 20
358 51.22 wind 1.0 14400 > th dose independent rect. 1 2
387 51.23 humidity 70.0 720 > th dose dependent rect. 4 10
392 51.23 wind 9.0 10 < th dose dependent rect. 15 14
398 51.24 radiation 30.0 90 < th dose independent rect. 4 11
408 51.25 wind 9.0 720 < th dose dependent rect. 15 2
411 51.26 wind 7.0 720 < th dose independent sin 23 NA
417 51.26 atmosphere 995.0 270 > th dose dependent rect. 11 10
422 51.27 wind 1.0 14400 < th dose independent rect. 1 2
451 51.28 radiation 1.0 720 < th dose dependent rect. 5 6
462 51.29 precipitation 0.1 14400 > th dose independent rect. 2 16
479 51.30 wind 9.0 270 < th dose dependent rect. 15 11
483 51.31 atmosphere 1005.0 720 > th dose independent rect. 4 12
489 51.31 humidity 50.0 10 > th dose dependent rect. 5 11
496 51.32 radiation 30.0 720 < th dose independent rect. 7 4
512 51.33 precipitation 0.1 14400 < th dose independent rect. 2 16
513 51.33 humidity 60.0 90 > th dose dependent sin 2 NA
517 51.33 precipitation 0.1 14400 < th dose dependent rect. 2 16
521 51.34 radiation 30.0 90 < th dose independent rect. 4 9
523 51.34 wind 9.0 10 < th dose independent rect. 5 15
529 51.34 wind 1.0 720 > th dose dependent rect. 11 4
535 51.35 humidity 80.0 90 > th dose independent rect. 4 10
539 51.35 precipitation 0.1 14400 > th dose dependent sin 3 NA
544 51.36 radiation 1.0 720 > th dose independent sin 4 NA
545 51.36 wind 7.0 720 < th dose independent rect. 15 3
586 51.38 wind 7.0 720 < th dose independent rect. 14 21
604 51.39 humidity 50.0 270 > th dose dependent rect. 2 15
630 51.41 radiation 1.0 10 < th dose dependent sin 9 NA
640 51.42 radiation 30.0 720 < th dose independent rect. 9 2
671 51.44 humidity 80.0 720 > th dose independent rect. 4 8
677 51.44 wind 1.0 270 > th dose dependent rect. 11 12
680 51.45 precipitation 0.1 14400 < th dose independent rect. 7 1
702 51.45 precipitation 0.1 14400 < th dose dependent rect. 7 1
708 51.46 radiation 30.0 270 < th dose independent sin 7 NA
730 51.47 radiation 30.0 720 < th dose independent sin 11 NA
742 51.47 wind 3.0 43200 < th dose dependent rect. 6 2
751 51.48 humidity 80.0 720 > th dose independent rect. 4 10
765 51.48 wind 9.0 270 < th dose dependent rect. 13 13
792 51.50 precipitation 0.1 14400 > th dose independent sin 2 NA
808 51.50 atmosphere 995.0 10 > th dose dependent rect. 5 18
810 51.51 wind 1.0 14400 < th dose independent rect. 1 4
815 51.51 radiation 30.0 720 < th dose independent rect. 4 9
842 51.52 radiation 40.0 90 < th dose dependent rect. 5 14
846 51.52 atmosphere 995.0 90 > th dose dependent rect. 4 19
848 51.53 radiation 1.0 720 > th dose independent rect. 5 8
866 51.53 radiation 1.0 720 < th dose dependent rect. 20 21
928 51.56 humidity 60.0 720 > th dose dependent sin 3 NA
938 51.57 radiation 1.0 720 < th dose independent rect. 6 1
950 51.58 radiation 30.0 720 < th dose independent sin 3 NA
951 51.58 precipitation 0.1 14400 < th dose independent sin 2 NA
967 51.58 precipitation 0.1 14400 > th dose independent rect. 23 19
970 51.58 radiation 40.0 270 < th dose dependent sin 5 NA
971 51.58 precipitation 0.1 14400 < th dose dependent sin 2 NA
994 51.59 precipitation 0.1 14400 < th dose independent rect. 23 19