Os01g0612200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome c oxidase, subunit Vb family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0612200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Cytochrome c oxidase, subunit Vb family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 31.31 | 0.263 | 11.8 | -0.403 | 0.5 | 2.16 | 0.375 | 4.43 | -0.0534 | 11.3 | 19.64 | 5755 | -- | -- |
| 33.35 | 0.269 | 11.7 | -0.436 | 0.492 | 0.387 | 0.385 | -- | -0.0413 | 11.3 | 44.41 | 4371 | -- | -- |
| 31.9 | 0.263 | 11.8 | -0.379 | 0.498 | 2.27 | -- | 4.65 | -0.0526 | 11.3 | 19.5 | 5752 | -- | -- |
| 33.89 | 0.271 | 11.7 | -0.423 | 0.47 | 0.415 | -- | -- | -0.0338 | 11.3 | 48.05 | 3665 | -- | -- |
| 46.99 | 0.319 | 11.8 | -0.423 | -- | 2.18 | -- | 4.54 | -0.0578 | -- | 19.63 | 5240 | -- | -- |
| 36.17 | 0.282 | 11.7 | -0.614 | 0.504 | -- | 0.392 | -- | -0.115 | 11.4 | -- | -- | -- | -- |
| 36.83 | 0.284 | 11.7 | -0.599 | 0.502 | -- | -- | -- | -0.113 | 11.4 | -- | -- | -- | -- |
| 43.57 | 0.307 | 11.7 | -0.406 | -- | 0.754 | -- | -- | 0.00139 | -- | 76.07 | 880 | -- | -- |
| 33.56 | 0.27 | 11.6 | -- | 0.491 | 0.597 | -- | -- | 0.126 | 11.3 | 36.89 | 38867 | -- | -- |
| 52.63 | 0.339 | 11.7 | -0.612 | -- | -- | -- | -- | -0.118 | -- | -- | -- | -- | -- |
| 46.27 | 0.318 | 11.7 | -- | 0.508 | -- | -- | -- | -0.0468 | 11.5 | -- | -- | -- | -- |
| 47.43 | 0.321 | 11.7 | -- | -- | 0.915 | -- | -- | 0.068 | -- | 42.75 | 902 | -- | -- |
| 62.49 | 0.369 | 11.7 | -- | -- | -- | -- | -- | -0.0506 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 30.55 | humidity | 60 | 43200 | < th | dose independent | rect. | 8 | 2 |
| 3 | 30.77 | humidity | 60 | 43200 | > th | dose independent | rect. | 8 | 2 |
| 4 | 30.80 | temperature | 20 | 1440 | > th | dose dependent | rect. | 2 | 2 |
| 5 | 30.80 | humidity | 90 | 14400 | < th | dose dependent | rect. | 1 | 5 |
| 8 | 30.82 | humidity | 90 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 9 | 30.83 | wind | 1 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 16 | 30.87 | humidity | 50 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 17 | 30.88 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 14 | 9 |
| 19 | 30.88 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 23 | 1 |
| 29 | 30.92 | humidity | 50 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 36 | 30.93 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 16 | 5 |
| 37 | 30.93 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 15 | 7 |
| 60 | 30.97 | humidity | 50 | 43200 | > th | dose independent | rect. | 10 | 3 |
| 66 | 30.97 | humidity | 70 | 14400 | < th | dose dependent | rect. | 7 | 2 |
| 87 | 30.99 | humidity | 50 | 43200 | < th | dose independent | rect. | 10 | 3 |
| 93 | 31.00 | atmosphere | 1015 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 95 | 31.00 | radiation | 20 | 43200 | < th | dose independent | rect. | 15 | 3 |
| 108 | 31.00 | humidity | 50 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 114 | 31.01 | temperature | 20 | 1440 | > th | dose independent | rect. | 4 | 1 |
| 115 | 31.01 | humidity | 80 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 116 | 31.01 | atmosphere | 1015 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 117 | 31.01 | radiation | 20 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 127 | 31.01 | humidity | 50 | 43200 | < th | dose dependent | rect. | 11 | 3 |
| 130 | 31.02 | wind | 1 | 14400 | < th | dose independent | rect. | 6 | 2 |
| 153 | 31.02 | temperature | 10 | 4320 | > th | dose dependent | rect. | 2 | 1 |
| 154 | 31.02 | temperature | 30 | 4320 | < th | dose dependent | rect. | 2 | 1 |
| 155 | 31.02 | humidity | 60 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 158 | 31.03 | temperature | 20 | 1440 | < th | dose independent | rect. | 4 | 1 |
| 160 | 31.03 | humidity | 60 | 14400 | > th | dose independent | rect. | 3 | 6 |
| 164 | 31.03 | humidity | 60 | 14400 | > th | dose independent | rect. | 20 | 13 |
| 172 | 31.04 | atmosphere | 1015 | 43200 | > th | dose independent | sin | 18 | NA |
| 196 | 31.05 | humidity | 60 | 14400 | > th | dose independent | rect. | 22 | 11 |
| 218 | 31.06 | humidity | 60 | 14400 | < th | dose independent | rect. | 20 | 13 |
| 262 | 31.08 | atmosphere | 1015 | 43200 | < th | dose independent | sin | 18 | NA |
| 281 | 31.08 | radiation | 20 | 43200 | > th | dose dependent | rect. | 15 | 16 |
| 305 | 31.09 | radiation | 10 | 43200 | > th | dose dependent | rect. | 16 | 2 |
| 380 | 31.11 | wind | 1 | 43200 | < th | dose dependent | rect. | 6 | 5 |
| 470 | 31.14 | humidity | 50 | 43200 | > th | dose independent | sin | 4 | NA |
| 473 | 31.14 | humidity | 50 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 480 | 31.14 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 11 | 7 |
| 681 | 31.18 | wind | 1 | 14400 | < th | dose independent | rect. | 22 | 1 |
| 719 | 31.19 | humidity | 50 | 43200 | < th | dose independent | sin | 5 | NA |
| 723 | 31.19 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 13 | 4 |
| 773 | 31.20 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 13 | 2 |
| 872 | 31.21 | wind | 1 | 14400 | < th | dose dependent | rect. | 6 | 2 |
| 877 | 31.21 | temperature | 20 | 270 | > th | dose dependent | rect. | 18 | 10 |
| 879 | 31.21 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 8 | 16 |
| 883 | 31.22 | humidity | 50 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 885 | 31.22 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 14 | 2 |
| 996 | 31.23 | atmosphere | 1010 | 14400 | > th | dose dependent | rect. | 11 | 1 |