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Os01g0612100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Mitochondrial ribosomal protein S11 (Nuclear encoded).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.29 (0.0209) R2 : 0.373
β1 : 1 (0.0782) R2dD : 0.23 R2D : 0.161
β2 : -- (--) R2dC : -- R2C : --
β3 : -0.647 (0.0595) R2dE : 0.186 R2E : 0.0663
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.21 (0.0447) R2dN8 : 0.0438 R2N8 : 0.0502
σ : 0.39
deviance : 70.3
__
_____
C
peak time of C : --
E
wheather : temperature
threshold : 29.6
memory length : 6110
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
61.36 0.368 9.34 0.728 0.484 -0.497 -0.272 -1.16 -0.309 2.07 29.45 1231 -- --
61.47 0.365 9.32 0.936 0.468 -0.626 -0.254 -- -0.306 2.08 29.63 1233 -- --
61.64 0.366 9.34 0.73 0.484 -0.499 -- -1.2 -0.307 2 29.4 1224 -- --
61.73 0.366 9.31 0.939 0.485 -0.635 -- -- -0.303 2.01 29.45 1230 -- --
72.6 0.397 9.25 1.33 -- -0.81 -- 1.38 -0.101 -- 26.3 1664 -- --
80.08 0.42 9.29 0.759 0.389 -- -0.461 -- -0.196 2.28 -- -- -- --
80.85 0.421 9.29 0.772 0.387 -- -- -- -0.193 2.17 -- -- -- --
70.3 0.39 9.29 1 -- -0.647 -- -- -0.21 -- 29.6 6110 -- --
84.04 0.427 9.33 -- 0.49 -0.495 -- -- -0.391 2.03 30.4 1181 -- --
89.79 0.443 9.28 0.788 -- -- -- -- -0.184 -- -- -- -- --
96.57 0.46 9.31 -- 0.401 -- -- -- -0.279 2.21 -- -- -- --
93.99 0.452 9.31 -- -- -0.516 -- -- -0.324 -- 30 6116 -- --
106.19 0.481 9.3 -- -- -- -- -- -0.271 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 60.16 humidity 80 1440 < th dose dependent rect. 18 1
2 60.20 humidity 50 1440 > th dose dependent rect. 18 1
5 60.67 temperature 25 1440 > th dose dependent rect. 15 2
6 60.70 temperature 25 1440 > th dose dependent rect. 15 4
17 61.21 humidity 80 1440 < th dose dependent rect. 16 4
27 61.33 radiation 10 1440 > th dose independent rect. 17 13
30 61.38 humidity 70 1440 > th dose independent rect. 15 13
34 61.39 radiation 30 1440 < th dose dependent rect. 17 11
36 61.40 humidity 70 1440 > th dose independent rect. 15 10
42 61.41 humidity 70 1440 > th dose independent rect. 15 7
44 61.42 humidity 70 1440 > th dose independent rect. 15 5
48 61.43 humidity 70 1440 > th dose independent sin 13 NA
58 61.49 radiation 10 1440 > th dose independent rect. 17 1
70 61.49 humidity 80 1440 < th dose dependent rect. 15 18
79 61.53 radiation 20 1440 < th dose dependent rect. 17 7
80 61.53 radiation 20 1440 < th dose dependent rect. 17 9
85 61.56 humidity 70 1440 > th dose independent rect. 15 18
96 61.61 radiation 20 1440 < th dose dependent rect. 17 5
109 61.68 radiation 20 1440 < th dose dependent rect. 17 3
160 61.79 radiation 1 1440 > th dose dependent rect. 17 1
209 61.93 temperature 30 14400 > th dose independent rect. 16 2
234 62.08 temperature 30 14400 < th dose independent rect. 16 2
241 62.11 humidity 80 1440 < th dose dependent sin 14 NA
265 62.20 humidity 60 14400 < th dose independent rect. 17 1
299 62.28 temperature 30 14400 < th dose independent rect. 15 11
345 62.39 humidity 80 1440 < th dose independent rect. 7 14
347 62.40 temperature 30 1440 < th dose independent rect. 15 20
358 62.45 humidity 70 1440 < th dose independent rect. 15 5
380 62.50 temperature 30 1440 > th dose independent rect. 15 20
413 62.57 temperature 25 1440 > th dose dependent sin 19 NA
416 62.59 humidity 70 1440 < th dose independent rect. 16 3
430 62.61 humidity 80 1440 > th dose independent rect. 6 15
434 62.62 radiation 10 1440 < th dose independent rect. 17 1
445 62.63 humidity 70 14400 < th dose dependent rect. 17 2
449 62.63 temperature 25 1440 > th dose dependent rect. 13 19
460 62.65 temperature 30 1440 > th dose dependent rect. 16 21
500 62.69 humidity 60 14400 > th dose independent rect. 17 1
509 62.70 temperature 30 14400 > th dose dependent rect. 17 1
519 62.72 humidity 50 1440 > th dose dependent rect. 11 11
538 62.74 radiation 10 1440 < th dose independent rect. 17 14
550 62.76 temperature 25 1440 > th dose dependent rect. 6 13
555 62.77 temperature 30 1440 > th dose dependent sin 9 NA
566 62.78 humidity 70 1440 < th dose independent sin 14 NA
579 62.80 temperature 30 14400 > th dose independent sin 13 NA
617 62.85 humidity 70 14400 < th dose dependent rect. 17 15
622 62.86 temperature 30 1440 < th dose independent rect. 15 13
625 62.86 temperature 30 1440 > th dose dependent rect. 10 1
642 62.87 humidity 70 14400 < th dose independent rect. 18 14
643 62.87 temperature 30 1440 > th dose dependent no NA NA
752 62.88 temperature 30 1440 > th dose independent rect. 15 4
756 62.88 temperature 30 1440 < th dose independent rect. 15 7
759 62.88 temperature 30 1440 < th dose independent rect. 15 9
762 62.88 temperature 30 1440 < th dose independent rect. 15 11
804 62.89 temperature 30 1440 > th dose dependent sin 1 NA
823 62.90 temperature 30 14400 < th dose independent sin 13 NA
825 62.90 temperature 30 1440 < th dose independent rect. 15 5
833 62.90 radiation 30 4320 > th dose dependent rect. 8 1
874 62.93 radiation 10 1440 < th dose independent rect. 17 11
881 62.94 temperature 30 1440 > th dose independent sin 11 NA
894 62.95 radiation 30 1440 > th dose independent rect. 7 1
912 62.95 humidity 70 14400 < th dose dependent rect. 17 5
931 62.95 humidity 60 1440 > th dose dependent rect. 6 16
944 62.96 humidity 50 1440 > th dose dependent sin 18 NA
947 62.96 temperature 30 1440 > th dose dependent rect. 9 4
949 62.96 radiation 20 4320 > th dose dependent rect. 16 16