Os01g0610300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Bromo adjacent region domain containing protein.
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Os01g0610300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Bromo adjacent region domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 44.34 | 0.31 | 11.3 | -0.628 | 0.538 | -0.683 | -0.72 | 0.302 | -0.339 | 17.9 | 10 | 90 | -- | -- |
| 44.64 | 0.311 | 11.3 | -0.635 | 0.559 | -0.601 | -0.76 | -- | -0.339 | 17.1 | 9.996 | 90 | -- | -- |
| 45.58 | 0.314 | 11.3 | -0.629 | 0.554 | -0.64 | -- | 0.32 | -0.341 | 17.5 | 9.811 | 90 | -- | -- |
| 46.17 | 0.316 | 11.3 | -0.628 | 0.551 | -0.616 | -- | -- | -0.337 | 17.3 | 10 | 90 | -- | -- |
| 50.89 | 0.332 | 11.2 | -0.639 | -- | -0.842 | -- | 0.498 | -0.28 | -- | 4.051 | 258 | -- | -- |
| 50.83 | 0.334 | 11.2 | -0.623 | 1.02 | -- | -0.519 | -- | -0.301 | 14.7 | -- | -- | -- | -- |
| 51.76 | 0.337 | 11.2 | -0.635 | 1.02 | -- | -- | -- | -0.304 | 14.6 | -- | -- | -- | -- |
| 50.82 | 0.332 | 11.2 | -0.672 | -- | -0.83 | -- | -- | -0.327 | -- | 4.089 | 275 | -- | -- |
| 56.6 | 0.35 | 11.2 | -- | 0.563 | -0.627 | -- | -- | -0.273 | 17.3 | 9.995 | 86 | -- | -- |
| 112.1 | 0.495 | 11.3 | -0.679 | -- | -- | -- | -- | -0.329 | -- | -- | -- | -- | -- |
| 62.4 | 0.37 | 11.2 | -- | 1.03 | -- | -- | -- | -0.233 | 14.7 | -- | -- | -- | -- |
| 62.8 | 0.369 | 11.2 | -- | -- | -0.867 | -- | -- | -0.264 | -- | 8.654 | 264 | -- | -- |
| 124.25 | 0.52 | 11.2 | -- | -- | -- | -- | -- | -0.254 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 39.18 | temperature | 20.0 | 90 | > th | dose independent | rect. | 1 | 5 |
| 3 | 39.34 | temperature | 20.0 | 270 | > th | dose independent | rect. | 1 | 3 |
| 4 | 39.49 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 1 | 6 |
| 6 | 39.63 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 8 | 5 |
| 7 | 39.68 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 4 | 21 |
| 8 | 39.68 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 4 | 21 |
| 11 | 39.74 | wind | 1.0 | 90 | > th | dose independent | rect. | 6 | 19 |
| 12 | 39.74 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 1 | 14 |
| 16 | 39.84 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 1 | 16 |
| 18 | 39.88 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 1 | 6 |
| 22 | 39.91 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 1 | 8 |
| 23 | 39.92 | temperature | 20.0 | 10 | > th | dose independent | rect. | 1 | 6 |
| 38 | 40.16 | humidity | 80.0 | 270 | > th | dose independent | rect. | 1 | 3 |
| 40 | 40.18 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 1 | 3 |
| 41 | 40.18 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 6 | 19 |
| 42 | 40.18 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 6 | 19 |
| 49 | 40.23 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 1 | 6 |
| 51 | 40.25 | radiation | 10.0 | 90 | < th | dose independent | rect. | 1 | 6 |
| 56 | 40.28 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 1 | 5 |
| 57 | 40.28 | wind | 9.0 | 270 | < th | dose independent | rect. | 4 | 21 |
| 58 | 40.28 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 1 | 3 |
| 65 | 40.36 | wind | 1.0 | 90 | > th | dose independent | rect. | 6 | 21 |
| 67 | 40.41 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 3 |
| 69 | 40.41 | temperature | 30.0 | 270 | < th | dose independent | rect. | 1 | 3 |
| 70 | 40.41 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 3 |
| 74 | 40.41 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 1 | 3 |
| 76 | 40.41 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 3 |
| 82 | 40.41 | temperature | 10.0 | 270 | > th | dose independent | rect. | 4 | 21 |
| 83 | 40.41 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 1 | 3 |
| 90 | 40.42 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 1 | 3 |
| 91 | 40.43 | wind | 9.0 | 270 | < th | dose independent | rect. | 1 | 3 |
| 96 | 40.45 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 1 | 6 |
| 99 | 40.46 | humidity | 80.0 | 10 | > th | dose independent | rect. | 1 | 6 |
| 100 | 40.47 | radiation | 10.0 | 90 | < th | dose independent | rect. | 1 | 8 |
| 101 | 40.48 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 1 | 3 |
| 114 | 40.58 | wind | 1.0 | 270 | > th | dose independent | rect. | 4 | 21 |
| 120 | 40.61 | humidity | 80.0 | 90 | > th | dose independent | rect. | 1 | 5 |
| 129 | 40.65 | temperature | 10.0 | 90 | > th | dose independent | rect. | 1 | 5 |
| 131 | 40.65 | temperature | 30.0 | 90 | < th | dose independent | rect. | 1 | 5 |
| 132 | 40.65 | humidity | 50.0 | 90 | > th | dose independent | rect. | 1 | 5 |
| 136 | 40.65 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 1 | 5 |
| 142 | 40.65 | temperature | 10.0 | 90 | > th | dose independent | rect. | 6 | 19 |
| 143 | 40.66 | wind | 9.0 | 90 | < th | dose independent | rect. | 1 | 5 |
| 152 | 40.71 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 3 |
| 153 | 40.71 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 3 |
| 162 | 40.77 | wind | 9.0 | 90 | < th | dose independent | rect. | 6 | 19 |
| 167 | 40.82 | wind | 9.0 | 4320 | < th | dose independent | rect. | 2 | 6 |
| 168 | 40.82 | radiation | 10.0 | 90 | < th | dose independent | rect. | 1 | 14 |
| 176 | 40.85 | radiation | 10.0 | 90 | < th | dose independent | rect. | 1 | 16 |
| 181 | 40.87 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 1 | 5 |
| 217 | 40.95 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 1 | 5 |
| 220 | 40.95 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 1 | 5 |
| 226 | 40.98 | wind | 9.0 | 10 | < th | dose independent | rect. | 1 | 6 |
| 227 | 40.98 | temperature | 10.0 | 10 | > th | dose independent | rect. | 1 | 6 |
| 229 | 40.98 | temperature | 30.0 | 10 | < th | dose independent | rect. | 1 | 6 |
| 230 | 40.98 | humidity | 50.0 | 10 | > th | dose independent | rect. | 1 | 6 |
| 234 | 40.98 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 1 | 6 |
| 236 | 40.98 | radiation | 20.0 | 10 | < th | dose independent | rect. | 1 | 6 |
| 239 | 40.98 | temperature | 10.0 | 10 | > th | dose independent | rect. | 7 | 18 |
| 243 | 41.01 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 9 | 5 |
| 245 | 41.01 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 9 | 5 |
| 275 | 41.08 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 2 | 6 |
| 278 | 41.08 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 2 | 6 |
| 282 | 41.08 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 2 | 6 |
| 287 | 41.08 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 2 | 6 |
| 288 | 41.08 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 8 | 18 |
| 299 | 41.11 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 6 | 19 |
| 322 | 41.15 | radiation | 10.0 | 90 | < th | dose dependent | sin | 4 | NA |
| 361 | 41.24 | wind | 7.0 | 270 | < th | dose independent | rect. | 20 | 13 |
| 386 | 41.30 | temperature | 15.0 | 270 | > th | dose independent | rect. | 9 | 11 |
| 408 | 41.36 | radiation | 1.0 | 90 | > th | dose independent | sin | 2 | NA |
| 414 | 41.38 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 20 | 13 |
| 420 | 41.38 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 20 | 13 |
| 426 | 41.41 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 7 | 18 |
| 457 | 41.44 | temperature | 20.0 | 10 | > th | dose independent | rect. | 3 | 3 |
| 490 | 41.52 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 1 | 21 |
| 494 | 41.53 | wind | 7.0 | 270 | < th | dose independent | rect. | 14 | 10 |
| 501 | 41.55 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 4 | 21 |
| 524 | 41.57 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 6 | 19 |
| 553 | 41.58 | radiation | 10.0 | 4320 | < th | dose dependent | rect. | 24 | 5 |
| 579 | 41.62 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 1 | 6 |
| 591 | 41.64 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 23 | 22 |
| 610 | 41.71 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 7 | 18 |
| 636 | 41.78 | radiation | 1.0 | 90 | < th | dose independent | sin | 2 | NA |
| 690 | 41.86 | wind | 1.0 | 270 | > th | dose independent | rect. | 14 | 11 |
| 693 | 41.87 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 21 | 3 |
| 695 | 41.87 | humidity | 50.0 | 10 | > th | dose independent | rect. | 7 | 18 |
| 738 | 41.97 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 14 | 7 |
| 744 | 41.98 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 16 | 5 |
| 749 | 41.98 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 13 | 16 |
| 752 | 41.99 | wind | 1.0 | 90 | > th | dose independent | rect. | 1 | 5 |
| 774 | 42.00 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 2 | 5 |
| 805 | 42.03 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 14 | 11 |
| 811 | 42.03 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 14 | 11 |
| 816 | 42.05 | radiation | 1.0 | 270 | < th | dose independent | rect. | 24 | 19 |
| 833 | 42.09 | humidity | 90.0 | 270 | < th | dose independent | rect. | 20 | 4 |
| 840 | 42.10 | radiation | 1.0 | 270 | < th | dose independent | rect. | 23 | 22 |
| 841 | 42.10 | wind | 9.0 | 270 | < th | dose dependent | rect. | 1 | 3 |
| 867 | 42.13 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 3 | 4 |
| 873 | 42.14 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 14 | 15 |
| 878 | 42.15 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 16 | 13 |
| 899 | 42.19 | wind | 9.0 | 4320 | < th | dose independent | rect. | 4 | 3 |
| 947 | 42.24 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 16 | 13 |
| 966 | 42.27 | temperature | 15.0 | 270 | > th | dose independent | rect. | 23 | 22 |
| 981 | 42.30 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 10 | 10 |
| 982 | 42.30 | temperature | 10.0 | 270 | > th | dose independent | rect. | 20 | 14 |
| 983 | 42.30 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 20 | 14 |
| 985 | 42.30 | temperature | 15.0 | 270 | > th | dose independent | rect. | 9 | 21 |
| 986 | 42.30 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 1 | 3 |
| 996 | 42.32 | temperature | 30.0 | 270 | < th | dose independent | rect. | 20 | 13 |