Os01g0609700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0609700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 210.66 | 0.682 | 5.2 | 0.107 | 1.32 | 1.1 | -1.13 | 1.72 | -1.13 | 9.1 | 68.38 | 6377 | -- | -- |
| 214.84 | 0.683 | 5.18 | 0.0845 | 1.33 | 1.25 | -1.24 | -- | -1.14 | 9.29 | 68.46 | 6700 | -- | -- |
| 215.08 | 0.683 | 5.2 | 0.0737 | 1.32 | 1.09 | -- | 1.91 | -1.13 | 9.13 | 68.17 | 6376 | -- | -- |
| 220.23 | 0.691 | 5.19 | 0.0362 | 1.32 | 1.26 | -- | -- | -1.16 | 9.39 | 68.46 | 6766 | -- | -- |
| 307.51 | 0.817 | 5.25 | 0.182 | -- | 1.05 | -- | 1.96 | -1.14 | -- | 68.95 | 7189 | -- | -- |
| 237.41 | 0.722 | 5.17 | -0.0372 | 1.22 | -- | -1.24 | -- | -1.06 | 9.25 | -- | -- | -- | -- |
| 242.9 | 0.73 | 5.17 | -0.0812 | 1.23 | -- | -- | -- | -1.06 | 9.28 | -- | -- | -- | -- |
| 308.72 | 0.818 | 5.24 | 0.0517 | -- | 1.17 | -- | -- | -1.19 | -- | 68.93 | 7275 | -- | -- |
| 220.26 | 0.691 | 5.19 | -- | 1.32 | 1.25 | -- | -- | -1.16 | 9.39 | 68.48 | 6766 | -- | -- |
| 330.31 | 0.849 | 5.21 | -0.0866 | -- | -- | -- | -- | -1.05 | -- | -- | -- | -- | -- |
| 243.07 | 0.729 | 5.17 | -- | 1.23 | -- | -- | -- | -1.05 | 9.29 | -- | -- | -- | -- |
| 308.79 | 0.818 | 5.24 | -- | -- | 1.16 | -- | -- | -1.19 | -- | 68.93 | 7271 | -- | -- |
| 330.51 | 0.849 | 5.21 | -- | -- | -- | -- | -- | -1.05 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 202.86 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 4 |
| 2 | 203.17 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 4 |
| 3 | 203.17 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 4 |
| 4 | 203.28 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 4 |
| 18 | 206.04 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 4 | 2 |
| 19 | 206.15 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 3 | 4 |
| 23 | 206.28 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 6 |
| 29 | 206.83 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 23 | 8 |
| 40 | 207.30 | wind | 9.0 | 14400 | < th | dose independent | rect. | 6 | 7 |
| 49 | 207.43 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 10 |
| 51 | 207.59 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 57 | 207.72 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 12 |
| 58 | 207.74 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 12 |
| 59 | 207.74 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 12 |
| 61 | 207.74 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 12 |
| 63 | 207.77 | wind | 3.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 71 | 208.00 | wind | 3.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 75 | 208.05 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 3 |
| 78 | 208.08 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 10 |
| 79 | 208.08 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 10 |
| 82 | 208.13 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 10 |
| 86 | 208.19 | wind | 9.0 | 14400 | < th | dose independent | rect. | 6 | 5 |
| 94 | 208.31 | wind | 3.0 | 14400 | < th | dose independent | rect. | 23 | 8 |
| 117 | 208.69 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 23 | 8 |
| 125 | 208.81 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 127 | 208.81 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 131 | 208.86 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 132 | 208.86 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 1 |
| 137 | 208.92 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 6 |
| 142 | 209.02 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 161 | 209.18 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 164 | 209.23 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 7 |
| 180 | 209.36 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 276 | 210.00 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 3 |
| 277 | 210.00 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 279 | 210.01 | wind | 3.0 | 14400 | < th | dose dependent | sin | 8 | NA |
| 284 | 210.05 | wind | 9.0 | 14400 | > th | dose independent | rect. | 10 | 2 |
| 287 | 210.06 | wind | 1.0 | 14400 | > th | dose independent | rect. | 4 | 3 |
| 290 | 210.08 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 293 | 210.08 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 364 | 210.47 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 366 | 210.47 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 381 | 210.60 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 382 | 210.60 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 402 | 210.73 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 408 | 210.76 | wind | 1.0 | 14400 | > th | dose independent | rect. | 4 | 7 |
| 438 | 210.99 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 460 | 211.15 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 462 | 211.17 | wind | 9.0 | 14400 | > th | dose independent | rect. | 7 | 4 |
| 470 | 211.21 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 11 | 1 |
| 475 | 211.23 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 3 | NA |
| 476 | 211.23 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 3 | NA |
| 477 | 211.23 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 3 | NA |
| 489 | 211.29 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 500 | 211.35 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 13 | 2 |
| 510 | 211.43 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 548 | 211.63 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 7 | 5 |
| 561 | 211.69 | wind | 9.0 | 14400 | < th | dose independent | rect. | 1 | 12 |
| 583 | 211.77 | wind | 9.0 | 14400 | > th | dose independent | rect. | 6 | 6 |
| 627 | 211.99 | wind | 3.0 | 14400 | < th | dose independent | sin | 8 | NA |
| 648 | 212.12 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 10 | 1 |
| 721 | 212.45 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 10 | 3 |
| 725 | 212.48 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 739 | 212.56 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 5 | 4 |
| 740 | 212.56 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 5 | 4 |
| 744 | 212.58 | radiation | 40.0 | 4320 | > th | dose independent | rect. | 15 | 17 |
| 763 | 212.63 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 767 | 212.64 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 3 | NA |
| 770 | 212.65 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 786 | 212.74 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 7 |
| 796 | 212.80 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 830 | 212.94 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 7 | 5 |
| 833 | 212.95 | wind | 3.0 | 14400 | > th | dose independent | sin | 8 | NA |
| 863 | 213.01 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 10 |
| 865 | 213.02 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 5 | 7 |
| 867 | 213.02 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 5 | 7 |
| 871 | 213.03 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 875 | 213.04 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 885 | 213.09 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 8 |
| 891 | 213.11 | wind | 7.0 | 4320 | < th | dose independent | rect. | 21 | 6 |
| 941 | 213.28 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 8 |
| 944 | 213.28 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 8 |
| 951 | 213.30 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 7 | 5 |
| 978 | 213.39 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 12 | 21 |
| 988 | 213.41 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 12 | 8 |