Os01g0608000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description :
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Os01g0608000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description :
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 186.33 | 0.641 | 2.95 | -0.312 | 0.274 | -0.324 | -0.876 | 3.68 | -0.00796 | 6.33 | 7.999 | 26 | -- | -- |
| 189.52 | 0.641 | 2.96 | -0.286 | 0.278 | -1.14 | -0.825 | -- | 0.00221 | 6.74 | 8 | 43 | -- | -- |
| 188.1 | 0.639 | 2.95 | -0.33 | 0.27 | -0.244 | -- | 3.65 | -0.0075 | 6.9 | 7.973 | 25 | -- | -- |
| 190.3 | 0.642 | 2.96 | -0.306 | 0.277 | -1.23 | -- | -- | -0.00545 | 6.9 | 7.967 | 25 | -- | -- |
| 191.9 | 0.645 | 2.95 | -0.331 | -- | -0.163 | -- | 3.74 | -0.00515 | -- | 7.932 | 25 | -- | -- |
| 196.92 | 0.658 | 2.98 | -0.409 | 0.252 | -- | -0.665 | -- | -0.0595 | 7.71 | -- | -- | -- | -- |
| 198.18 | 0.659 | 2.98 | -0.426 | 0.251 | -- | -- | -- | -0.0584 | 7.82 | -- | -- | -- | -- |
| 194.19 | 0.649 | 2.97 | -0.299 | -- | -1.19 | -- | -- | -0.0073 | -- | 7.908 | 25 | -- | -- |
| 192.51 | 0.646 | 2.96 | -- | 0.274 | -1.4 | -- | -- | 0.0269 | 6.79 | 7.965 | 25 | -- | -- |
| 201.59 | 0.663 | 2.98 | -0.423 | -- | -- | -- | -- | -0.0549 | -- | -- | -- | -- | -- |
| 202.95 | 0.666 | 2.97 | -- | 0.248 | -- | -- | -- | -0.011 | 7.94 | -- | -- | -- | -- |
| 196.43 | 0.653 | 2.97 | -- | -- | -1.34 | -- | -- | 0.0302 | -- | 7.93 | 25 | -- | -- |
| 206.31 | 0.67 | 2.97 | -- | -- | -- | -- | -- | -0.00802 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 177.61 | wind | 7 | 10 | > th | dose dependent | rect. | 12 | 2 |
| 5 | 179.80 | wind | 7 | 30 | > th | dose independent | rect. | 12 | 3 |
| 7 | 180.35 | humidity | 70 | 10 | < th | dose independent | rect. | 19 | 13 |
| 13 | 180.37 | humidity | 70 | 30 | < th | dose dependent | rect. | 19 | 13 |
| 20 | 180.41 | humidity | 80 | 90 | < th | dose dependent | rect. | 3 | 4 |
| 24 | 180.43 | humidity | 80 | 90 | < th | dose dependent | rect. | 5 | 2 |
| 26 | 180.44 | radiation | 30 | 90 | > th | dose independent | rect. | 7 | 1 |
| 44 | 180.45 | humidity | 80 | 90 | < th | dose independent | rect. | 6 | 1 |
| 62 | 180.45 | humidity | 80 | 90 | < th | dose dependent | rect. | 1 | 6 |
| 80 | 180.46 | radiation | 30 | 90 | > th | dose dependent | rect. | 7 | 1 |
| 122 | 180.48 | radiation | 30 | 10 | > th | dose dependent | rect. | 7 | 1 |
| 173 | 180.49 | humidity | 70 | 10 | < th | dose independent | rect. | 7 | 1 |
| 247 | 180.49 | humidity | 70 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 442 | 180.89 | radiation | 30 | 10 | > th | dose dependent | rect. | 13 | 20 |
| 621 | 182.56 | radiation | 40 | 10 | < th | dose independent | sin | 12 | NA |
| 738 | 185.03 | radiation | 1 | 90 | > th | dose independent | rect. | 4 | 1 |
| 748 | 185.03 | radiation | 1 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 760 | 185.11 | radiation | 20 | 10 | > th | dose independent | rect. | 13 | 20 |
| 766 | 185.29 | humidity | 80 | 1440 | < th | dose dependent | rect. | 21 | 10 |
| 769 | 185.33 | radiation | 30 | 10 | > th | dose independent | rect. | 13 | 1 |
| 774 | 185.42 | atmosphere | 1005 | 30 | > th | dose dependent | rect. | 7 | 1 |
| 808 | 185.66 | atmosphere | 1005 | 30 | > th | dose independent | rect. | 24 | 8 |
| 816 | 185.76 | wind | 1 | 30 | < th | dose dependent | rect. | 11 | 1 |
| 865 | 186.34 | humidity | 80 | 1440 | < th | dose dependent | rect. | 20 | 12 |
| 866 | 186.37 | humidity | 80 | 720 | < th | dose independent | rect. | 21 | 11 |
| 891 | 186.71 | humidity | 90 | 720 | < th | dose dependent | rect. | 24 | 1 |
| 892 | 186.73 | radiation | 10 | 270 | < th | dose dependent | rect. | 9 | 1 |
| 898 | 186.87 | atmosphere | 1005 | 30 | > th | dose dependent | rect. | 24 | 8 |
| 904 | 186.93 | humidity | 80 | 720 | > th | dose independent | rect. | 21 | 6 |
| 926 | 187.08 | humidity | 80 | 720 | > th | dose independent | rect. | 22 | 9 |
| 932 | 187.28 | radiation | 20 | 10 | > th | dose dependent | rect. | 13 | 1 |
| 934 | 187.30 | wind | 1 | 10 | < th | dose dependent | rect. | 6 | 1 |
| 950 | 187.50 | radiation | 20 | 10 | < th | dose independent | rect. | 11 | 1 |
| 970 | 187.68 | wind | 5 | 10 | > th | dose dependent | rect. | 5 | 10 |
| 986 | 187.78 | humidity | 80 | 720 | > th | dose dependent | rect. | 23 | 2 |
| 994 | 187.85 | wind | 7 | 30 | > th | dose dependent | rect. | 17 | 22 |
| 998 | 187.88 | wind | 1 | 270 | < th | dose dependent | rect. | 8 | 1 |
| 1000 | 187.90 | humidity | 90 | 720 | < th | dose dependent | rect. | 20 | 5 |