Os01g0607600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Transcriptional corepressor LEUNIG.
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Os01g0607600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Transcriptional corepressor LEUNIG.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 113.17 | 0.5 | 2.88 | 0.0552 | 0.04 | 1.58 | 0.145 | 3.31 | 0.0742 | 2.66 | 7.499 | 26 | -- | -- |
| 116.13 | 0.502 | 2.89 | 0.00734 | 0.036 | 0.75 | 0.171 | -- | 0.0527 | 2.15 | 7.498 | 31 | -- | -- |
| 113.24 | 0.496 | 2.88 | 0.0532 | 0.0431 | 1.56 | -- | 3.18 | 0.0749 | 2.91 | 7.5 | 25 | -- | -- |
| 115.47 | 0.5 | 2.86 | 0.0129 | 0.0536 | 0.758 | -- | -- | 0.0702 | 4.07 | 7.44 | 31 | -- | -- |
| 113.34 | 0.496 | 2.88 | 0.0513 | -- | 1.54 | -- | 3.17 | 0.0744 | -- | 7.462 | 25 | -- | -- |
| 118.73 | 0.511 | 2.86 | -0.0705 | 0.0146 | -- | -0.159 | -- | 0.0423 | 15.2 | -- | -- | -- | -- |
| 118.81 | 0.51 | 2.86 | -0.0737 | 0.0151 | -- | -- | -- | 0.0414 | 13.3 | -- | -- | -- | -- |
| 115.53 | 0.501 | 2.86 | 0.0136 | -- | 0.729 | -- | -- | 0.0764 | -- | 7.499 | 31 | -- | -- |
| 115.46 | 0.5 | 2.86 | -- | 0.0375 | 0.744 | -- | -- | 0.0714 | 3.86 | 7.4 | 31 | -- | -- |
| 118.83 | 0.509 | 2.86 | -0.0743 | -- | -- | -- | -- | 0.041 | -- | -- | -- | -- | -- |
| 118.96 | 0.51 | 2.86 | -- | 0.0163 | -- | -- | -- | 0.0496 | 13.5 | -- | -- | -- | -- |
| 115.53 | 0.501 | 2.86 | -- | -- | 0.724 | -- | -- | 0.0764 | -- | 7.499 | 31 | -- | -- |
| 118.97 | 0.509 | 2.86 | -- | -- | -- | -- | -- | 0.0493 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 104.29 | wind | 7 | 10 | > th | dose independent | rect. | 19 | 1 |
| 3 | 104.29 | wind | 7 | 10 | > th | dose dependent | rect. | 19 | 1 |
| 46 | 106.65 | wind | 7 | 30 | > th | dose independent | rect. | 19 | 16 |
| 118 | 110.54 | wind | 9 | 270 | > th | dose independent | rect. | 16 | 19 |
| 126 | 110.79 | wind | 9 | 270 | > th | dose dependent | rect. | 16 | 19 |
| 144 | 111.45 | wind | 7 | 30 | < th | dose independent | rect. | 23 | 23 |
| 150 | 111.71 | wind | 9 | 270 | > th | dose independent | rect. | 16 | 4 |
| 158 | 111.85 | wind | 7 | 30 | > th | dose independent | sin | 9 | NA |
| 163 | 111.91 | wind | 5 | 30 | > th | dose dependent | rect. | 19 | 16 |
| 167 | 112.01 | radiation | 40 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 190 | 112.10 | wind | 9 | 270 | > th | dose dependent | rect. | 16 | 1 |
| 210 | 112.17 | wind | 9 | 270 | > th | dose dependent | rect. | 16 | 4 |
| 211 | 112.21 | radiation | 40 | 1440 | > th | dose independent | rect. | 15 | 1 |
| 288 | 112.65 | wind | 7 | 10 | > th | dose independent | rect. | 12 | 1 |
| 304 | 112.79 | wind | 7 | 30 | < th | dose independent | sin | 9 | NA |
| 364 | 113.18 | wind | 9 | 720 | > th | dose dependent | rect. | 22 | 14 |
| 378 | 113.29 | wind | 9 | 720 | > th | dose independent | rect. | 22 | 14 |
| 379 | 113.29 | wind | 9 | 720 | > th | dose dependent | rect. | 1 | 11 |
| 388 | 113.35 | wind | 9 | 720 | > th | dose dependent | rect. | 9 | 3 |
| 413 | 113.42 | wind | 9 | 720 | > th | dose independent | rect. | 1 | 11 |
| 423 | 113.51 | wind | 9 | 720 | > th | dose independent | rect. | 9 | 3 |
| 479 | 113.69 | wind | 5 | 90 | > th | dose independent | rect. | 8 | 4 |
| 495 | 113.75 | wind | 5 | 720 | > th | dose independent | rect. | 11 | 1 |
| 497 | 113.75 | wind | 5 | 720 | > th | dose dependent | rect. | 11 | 1 |
| 513 | 113.81 | wind | 5 | 90 | > th | dose independent | rect. | 10 | 1 |
| 542 | 113.96 | wind | 7 | 30 | > th | dose independent | rect. | 9 | 12 |
| 629 | 114.17 | wind | 9 | 270 | > th | dose independent | sin | 11 | NA |
| 633 | 114.17 | wind | 3 | 90 | > th | dose dependent | rect. | 8 | 4 |
| 691 | 114.28 | wind | 9 | 270 | < th | dose independent | sin | 17 | NA |
| 716 | 114.30 | wind | 5 | 270 | > th | dose dependent | rect. | 6 | 3 |
| 718 | 114.30 | wind | 9 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 719 | 114.31 | wind | 9 | 270 | > th | dose independent | sin | 17 | NA |
| 745 | 114.34 | wind | 9 | 1440 | > th | dose independent | rect. | 19 | 1 |
| 757 | 114.34 | wind | 9 | 1440 | > th | dose dependent | rect. | 19 | 1 |
| 802 | 114.39 | wind | 7 | 30 | > th | dose independent | no | NA | NA |
| 803 | 114.39 | wind | 9 | 270 | < th | dose independent | sin | 11 | NA |
| 815 | 114.39 | wind | 9 | 270 | > th | dose dependent | sin | 11 | NA |
| 816 | 114.39 | wind | 9 | 720 | > th | dose dependent | rect. | 19 | 17 |
| 829 | 114.42 | wind | 7 | 30 | > th | dose independent | rect. | 11 | 23 |
| 944 | 114.60 | wind | 3 | 90 | > th | dose dependent | rect. | 10 | 1 |
| 994 | 114.67 | wind | 9 | 270 | < th | dose independent | no | NA | NA |