Os01g0607000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glutelin family protein.
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Os01g0607000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glutelin family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 186.78 | 0.637 | -7240 | 44300 | 0.0902 | -1820000 | -0.584 | 11100000 | 0.0898 | 5.06 | 995 | 90 | -- | -- |
| 193.55 | 0.653 | 2.94 | -0.00323 | 0.0449 | 0.981 | -0.711 | -- | 0.0899 | 5.67 | 995 | 90 | -- | -- |
| 187.48 | 0.638 | -7240 | 44300 | 0.088 | -1820000 | -- | 11100000 | 0.0979 | 2.94 | 995 | 90 | -- | -- |
| 181.37 | 0.627 | 2.94 | -0.0341 | 0.0532 | 3.81 | -- | -- | 0.105 | 6.53 | 994.7 | 151 | -- | -- |
| 187.92 | 0.638 | -7240 | 44300 | -- | -1820000 | -- | 11100000 | 0.1 | -- | 995 | 90 | -- | -- |
| 194.6 | 0.654 | 2.94 | 0.00493 | 0.0315 | -- | -0.753 | -- | 0.0873 | 5.74 | -- | -- | -- | -- |
| 195.8 | 0.655 | 2.94 | -0.00126 | 0.0615 | -- | -- | -- | 0.0897 | 1.44 | -- | -- | -- | -- |
| 181.5 | 0.627 | 2.94 | -0.0199 | -- | 3.82 | -- | -- | 0.0993 | -- | 994.6 | 151 | -- | -- |
| 181.12 | 0.627 | 2.94 | -- | 0.0828 | 3.85 | -- | -- | 0.1 | 3.2 | 994.6 | 154 | -- | -- |
| 196.03 | 0.654 | 2.94 | 0.00118 | -- | -- | -- | -- | 0.091 | -- | -- | -- | -- | -- |
| 195.8 | 0.655 | 2.94 | -- | 0.0615 | -- | -- | -- | 0.0898 | 1.44 | -- | -- | -- | -- |
| 181.51 | 0.627 | 2.94 | -- | -- | 3.82 | -- | -- | 0.102 | -- | 994.6 | 151 | -- | -- |
| 196.03 | 0.654 | 2.94 | -- | -- | -- | -- | -- | 0.0909 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 176.29 | radiation | 40.0 | 90 | > th | dose independent | rect. | 15 | 1 |
| 18 | 176.29 | radiation | 40.0 | 90 | > th | dose dependent | rect. | 15 | 1 |
| 35 | 176.69 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 23 | 23 |
| 37 | 180.14 | atmosphere | 995.0 | 10 | > th | dose independent | sin | 8 | NA |
| 39 | 180.26 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 17 | 1 |
| 46 | 180.26 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 17 | 1 |
| 53 | 180.31 | humidity | 70.0 | 30 | < th | dose independent | rect. | 18 | 1 |
| 56 | 180.34 | temperature | 30.0 | 30 | > th | dose independent | rect. | 18 | 1 |
| 327 | 180.38 | atmosphere | 995.0 | 30 | < th | dose dependent | sin | 8 | NA |
| 347 | 180.40 | atmosphere | 995.0 | 30 | < th | dose independent | sin | 8 | NA |
| 523 | 181.41 | temperature | 30.0 | 90 | > th | dose dependent | rect. | 16 | 3 |
| 559 | 181.59 | radiation | 10.0 | 90 | > th | dose dependent | rect. | 17 | 1 |
| 578 | 182.09 | radiation | 10.0 | 90 | > th | dose independent | rect. | 17 | 1 |
| 612 | 182.54 | humidity | 90.0 | 10 | < th | dose independent | rect. | 22 | 1 |
| 617 | 182.72 | humidity | 90.0 | 90 | > th | dose independent | rect. | 9 | 1 |
| 618 | 182.72 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 9 | 1 |
| 622 | 182.90 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 624 | 183.00 | wind | 3.0 | 10 | < th | dose independent | rect. | 22 | 1 |
| 643 | 183.11 | humidity | 80.0 | 10 | > th | dose independent | rect. | 22 | 1 |
| 644 | 183.17 | wind | 3.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 663 | 183.22 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 664 | 183.22 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 22 | 1 |
| 666 | 183.22 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 671 | 183.24 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 672 | 183.26 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 674 | 183.27 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 677 | 183.29 | wind | 1.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 680 | 183.29 | temperature | 10.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 682 | 183.29 | temperature | 30.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 683 | 183.29 | humidity | 50.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 687 | 183.29 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 689 | 183.29 | radiation | 1.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 694 | 183.29 | temperature | 10.0 | 30 | > th | dose independent | rect. | 23 | 23 |
| 696 | 183.29 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 703 | 183.32 | radiation | 30.0 | 4320 | < th | dose dependent | rect. | 23 | 1 |
| 704 | 183.33 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 709 | 183.38 | wind | 9.0 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 711 | 183.38 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 714 | 183.38 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 718 | 183.38 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 728 | 183.38 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 729 | 183.38 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 749 | 183.38 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 24 | 23 |
| 753 | 183.38 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 23 | 1 |
| 758 | 183.41 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 800 | 183.47 | wind | 9.0 | 30 | < th | dose independent | rect. | 23 | 23 |
| 804 | 183.48 | temperature | 25.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 812 | 183.57 | wind | 1.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 816 | 183.62 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 819 | 183.66 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 23 | 23 |
| 820 | 183.66 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 873 | 184.28 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 4 | 2 |
| 874 | 184.28 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 4 | 2 |
| 881 | 184.39 | atmosphere | 1000.0 | 90 | < th | dose independent | rect. | 4 | 1 |
| 884 | 184.40 | atmosphere | 1000.0 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 925 | 184.68 | humidity | 70.0 | 30 | < th | dose dependent | rect. | 18 | 1 |
| 965 | 185.03 | wind | 1.0 | 270 | < th | dose independent | rect. | 12 | 9 |
| 968 | 185.14 | atmosphere | 995.0 | 90 | < th | dose dependent | sin | 16 | NA |