Os01g0606200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0606200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 148.12 | 0.572 | 4.64 | 1.04 | 0.289 | -2.08 | 0.0266 | -0.549 | -0.0725 | 12.8 | 10.3 | 5736 | -- | -- |
| 148.37 | 0.567 | 4.62 | 1.16 | 0.292 | -2.04 | 0.0207 | -- | -0.0401 | 12.9 | 6.795 | 5732 | -- | -- |
| 148.12 | 0.567 | 4.64 | 1.04 | 0.29 | -2.08 | -- | -0.55 | -0.0722 | 12.9 | 10.29 | 5739 | -- | -- |
| 148.38 | 0.567 | 4.62 | 1.16 | 0.292 | -2.04 | -- | -- | -0.0395 | 12.9 | 6.931 | 5735 | -- | -- |
| 152.31 | 0.575 | 4.63 | 1.06 | -- | -2.13 | -- | -0.671 | 0.00366 | -- | 9.765 | 6827 | -- | -- |
| 218.04 | 0.692 | 4.72 | 0.173 | 0.358 | -- | 0.0994 | -- | -0.481 | 13.2 | -- | -- | -- | -- |
| 218.08 | 0.692 | 4.72 | 0.177 | 0.359 | -- | -- | -- | -0.481 | 13.3 | -- | -- | -- | -- |
| 152.71 | 0.576 | 4.63 | 1.15 | -- | -2.09 | -- | -- | -0.06 | -- | 10.04 | 5405 | -- | -- |
| 166.75 | 0.601 | 4.67 | -- | 0.28 | -1.58 | -- | -- | -0.256 | 15 | -1.002 | 2097 | -- | -- |
| 226.02 | 0.702 | 4.73 | 0.163 | -- | -- | -- | -- | -0.488 | -- | -- | -- | -- | -- |
| 218.9 | 0.692 | 4.73 | -- | 0.356 | -- | -- | -- | -0.5 | 13.2 | -- | -- | -- | -- |
| 169.57 | 0.606 | 4.67 | -- | -- | -1.53 | -- | -- | -0.256 | -- | 13.83 | 2443 | -- | -- |
| 226.72 | 0.703 | 4.73 | -- | -- | -- | -- | -- | -0.506 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 141.53 | wind | 9 | 43200 | > th | dose dependent | rect. | 20 | 10 |
| 2 | 141.77 | radiation | 30 | 4320 | < th | dose independent | rect. | 15 | 17 |
| 4 | 142.66 | wind | 9 | 43200 | > th | dose independent | rect. | 20 | 10 |
| 7 | 143.77 | wind | 9 | 43200 | < th | dose independent | rect. | 20 | 10 |
| 18 | 145.01 | wind | 5 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 21 | 145.86 | radiation | 20 | 4320 | > th | dose dependent | rect. | 15 | 17 |
| 22 | 145.99 | wind | 5 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 23 | 146.25 | wind | 9 | 43200 | < th | dose independent | rect. | 19 | 5 |
| 28 | 146.41 | wind | 9 | 43200 | > th | dose independent | rect. | 20 | 5 |
| 31 | 146.58 | temperature | 10 | 4320 | > th | dose dependent | rect. | 17 | 2 |
| 39 | 146.88 | wind | 9 | 43200 | > th | dose dependent | rect. | 20 | 4 |
| 49 | 147.10 | temperature | 30 | 4320 | < th | dose dependent | rect. | 18 | 1 |
| 52 | 147.16 | wind | 5 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 71 | 147.61 | temperature | 25 | 4320 | > th | dose independent | rect. | 6 | 2 |
| 77 | 147.67 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 13 |
| 123 | 148.36 | temperature | 25 | 4320 | < th | dose independent | rect. | 6 | 2 |
| 133 | 148.52 | radiation | 30 | 4320 | > th | dose independent | rect. | 15 | 17 |
| 140 | 148.55 | temperature | 10 | 4320 | > th | dose dependent | rect. | 6 | 17 |
| 152 | 148.61 | temperature | 10 | 4320 | > th | dose dependent | rect. | 7 | 2 |
| 157 | 148.64 | temperature | 10 | 4320 | > th | dose dependent | sin | 18 | NA |
| 172 | 148.70 | temperature | 10 | 4320 | > th | dose dependent | rect. | 6 | 4 |
| 184 | 148.76 | temperature | 30 | 4320 | < th | dose dependent | rect. | 7 | 2 |
| 191 | 148.78 | temperature | 25 | 4320 | > th | dose dependent | rect. | 6 | 4 |
| 192 | 148.78 | radiation | 20 | 4320 | > th | dose dependent | rect. | 16 | 15 |
| 205 | 148.81 | radiation | 1 | 43200 | < th | dose dependent | rect. | 19 | 5 |
| 248 | 148.92 | temperature | 25 | 4320 | > th | dose dependent | rect. | 24 | 10 |
| 286 | 149.00 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 22 |
| 336 | 149.14 | wind | 5 | 43200 | > th | dose independent | rect. | 16 | 20 |
| 343 | 149.14 | temperature | 10 | 4320 | > th | dose dependent | rect. | 13 | 22 |
| 363 | 149.19 | wind | 5 | 43200 | < th | dose independent | rect. | 17 | 19 |
| 410 | 149.29 | temperature | 10 | 4320 | > th | dose dependent | no | NA | NA |
| 415 | 149.29 | temperature | 10 | 4320 | > th | dose dependent | rect. | 15 | 23 |
| 490 | 149.45 | wind | 5 | 43200 | > th | dose dependent | rect. | 17 | 19 |
| 559 | 149.57 | wind | 9 | 43200 | > th | dose independent | rect. | 17 | 14 |
| 585 | 149.60 | temperature | 25 | 4320 | > th | dose dependent | sin | 7 | NA |
| 620 | 149.66 | atmosphere | 1000 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 676 | 149.72 | humidity | 80 | 14400 | > th | dose dependent | rect. | 21 | 2 |
| 788 | 149.89 | wind | 5 | 43200 | < th | dose independent | rect. | 17 | 17 |
| 901 | 150.04 | temperature | 30 | 4320 | < th | dose dependent | rect. | 17 | 18 |
| 912 | 150.07 | atmosphere | 1000 | 43200 | < th | dose dependent | rect. | 11 | 4 |