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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os01g0605500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Kinesin, motor region domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.96 (0.0173) R2 : 0.34
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : 4.99 (0.326) R2dE : 0.338 R2E : 0.335
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0577 (0.0364) R2dN8 : 0.00471 R2N8 : 0.00184
σ : 0.324
deviance : 48.5
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_____
C
peak time of C : --
E
wheather : radiation
threshold : 41.06
memory length : 167
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 7.7
open length of G : 0.817

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
48.28 0.326 2.97 0.0952 0.00176 5.39 0.207 12 0.0639 8.28 41.12 126 7.7 0.934
48.29 0.324 2.96 0.0519 0.00208 4.96 0.212 -- 0.0644 8.25 44.82 89 7.66 0.908
48.41 0.324 2.97 0.1 0.00107 5.37 -- 12.1 0.0637 8.26 41.1 126 7.7 0.935
48.41 0.324 2.96 0.0564 0.00251 4.98 -- -- 0.0638 19.4 41.08 166 7.7 0.82
48.41 0.324 2.97 0.1 -- 5.37 -- 12.1 0.0636 -- 41.1 126 7.7 0.935
72.71 0.4 2.96 0.0721 0.0464 -- 0.288 -- 0.052 9.29 -- -- -- --
72.99 0.4 2.96 0.0833 0.0473 -- -- -- 0.0528 10.8 -- -- -- --
48.41 0.324 2.96 0.0562 -- 4.98 -- -- 0.0638 -- 41.08 166 7.7 0.821
48.49 0.324 2.96 -- 0.0128 4.98 -- -- 0.0579 14.3 41.08 154 7.72 0.837
73.13 0.4 2.97 0.0823 -- -- -- -- 0.0525 -- -- -- -- --
73.17 0.4 2.97 -- 0.0467 -- -- -- 0.0435 10.7 -- -- -- --
48.5 0.324 2.96 -- -- 4.99 -- -- 0.0577 -- 41.06 167 7.7 0.817
73.31 0.4 2.97 -- -- -- -- -- 0.0434 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 62.61 temperature 30.0 10 > th dose independent rect. 10 1
3 68.56 radiation 40.0 90 > th dose dependent rect. 8 1
37 68.64 atmosphere 1005.0 90 < th dose independent rect. 8 1
38 68.64 atmosphere 1005.0 10 < th dose independent rect. 9 1
47 68.67 temperature 30.0 10 < th dose independent sin 8 NA
52 69.13 temperature 30.0 10 > th dose dependent rect. 10 1
71 69.17 temperature 30.0 30 < th dose independent rect. 21 22
73 69.37 humidity 90.0 30 < th dose independent rect. 19 2
76 69.48 humidity 90.0 90 < th dose dependent rect. 19 2
116 69.79 temperature 20.0 270 > th dose dependent rect. 6 1
121 69.86 radiation 1.0 43200 < th dose dependent rect. 20 2
131 69.95 humidity 80.0 30 < th dose dependent rect. 19 11
148 69.96 temperature 30.0 30 < th dose independent rect. 24 19
149 69.96 humidity 80.0 30 < th dose dependent rect. 19 9
152 69.97 humidity 80.0 30 < th dose dependent rect. 19 7
162 70.00 temperature 20.0 90 > th dose independent rect. 19 2
174 70.04 atmosphere 1010.0 10 < th dose dependent rect. 20 1
186 70.08 temperature 25.0 720 > th dose independent rect. 24 2
211 70.16 wind 7.0 90 < th dose independent rect. 19 2
212 70.17 humidity 70.0 30 > th dose independent rect. 19 2
213 70.17 radiation 1.0 1440 < th dose dependent rect. 20 2
225 70.18 temperature 25.0 30 > th dose dependent rect. 19 15
234 70.20 temperature 10.0 1440 > th dose independent rect. 20 2
237 70.20 temperature 30.0 1440 < th dose independent rect. 20 2
241 70.20 humidity 50.0 1440 > th dose independent rect. 20 2
247 70.20 atmosphere 995.0 1440 > th dose independent rect. 20 2
248 70.20 radiation 1.0 1440 < th dose independent rect. 20 2
268 70.20 temperature 10.0 1440 > th dose independent rect. 22 22
284 70.26 temperature 10.0 90 > th dose dependent rect. 19 2
285 70.27 wind 3.0 30 > th dose independent rect. 19 2
287 70.27 temperature 25.0 720 < th dose independent rect. 24 7
289 70.27 temperature 30.0 10 > th dose independent rect. 16 19
290 70.27 temperature 25.0 30 > th dose dependent rect. 6 4
297 70.30 temperature 20.0 270 > th dose dependent rect. 5 4
301 70.31 temperature 25.0 720 > th dose independent rect. 23 10
303 70.33 temperature 25.0 270 > th dose independent rect. 6 1
304 70.33 precipitation 0.1 90 < th dose independent rect. 19 2
305 70.33 wind 1.0 270 > th dose independent rect. 5 16
306 70.33 precipitation 0.1 90 < th dose dependent rect. 19 2
314 70.37 temperature 10.0 90 > th dose independent rect. 19 2
316 70.37 temperature 30.0 90 < th dose independent rect. 19 2
317 70.37 humidity 50.0 90 > th dose independent rect. 19 2
319 70.37 atmosphere 995.0 90 > th dose independent rect. 19 2
321 70.37 atmosphere 1010.0 90 < th dose independent rect. 19 2
323 70.37 radiation 1.0 90 < th dose independent rect. 19 2
329 70.37 temperature 10.0 90 > th dose independent rect. 21 22
330 70.37 radiation 1.0 90 < th dose dependent rect. 19 2
338 70.38 wind 9.0 90 < th dose dependent rect. 19 2
345 70.40 wind 9.0 90 < th dose independent rect. 21 22
351 70.42 atmosphere 995.0 90 > th dose independent rect. 21 22
352 70.42 wind 1.0 270 > th dose dependent rect. 6 1
358 70.44 temperature 25.0 720 < th dose independent rect. 1 4
360 70.44 precipitation 0.1 90 < th dose independent rect. 21 22
361 70.44 precipitation 0.1 90 < th dose dependent rect. 21 22
367 70.46 temperature 25.0 720 < th dose independent rect. 24 9
372 70.47 temperature 30.0 30 < th dose independent rect. 3 16
374 70.47 temperature 25.0 10 > th dose dependent rect. 20 1
379 70.48 humidity 50.0 90 > th dose independent rect. 21 22
393 70.50 temperature 10.0 90 > th dose dependent rect. 19 16
400 70.51 atmosphere 1015.0 90 < th dose dependent rect. 19 2
410 70.53 atmosphere 995.0 90 > th dose dependent rect. 19 2
465 70.57 radiation 10.0 30 < th dose dependent rect. 21 22
468 70.58 wind 5.0 30 < th dose independent rect. 19 15
474 70.59 wind 1.0 270 > th dose independent rect. 6 1
522 70.62 wind 1.0 270 > th dose independent rect. 5 4
534 70.63 temperature 30.0 10 < th dose independent rect. 3 13
536 70.63 temperature 30.0 10 < th dose dependent rect. 20 1
567 70.68 humidity 80.0 270 > th dose independent rect. 6 2
573 70.69 temperature 25.0 1440 < th dose independent rect. 1 1
578 70.69 temperature 20.0 270 > th dose independent rect. 5 16
630 70.72 wind 1.0 270 > th dose independent rect. 4 6
650 70.74 humidity 90.0 270 < th dose independent rect. 16 5
653 70.74 radiation 10.0 10 < th dose dependent rect. 6 5
654 70.74 temperature 15.0 10 > th dose dependent rect. 6 6
656 70.74 radiation 20.0 270 > th dose dependent rect. 16 15
695 70.78 radiation 20.0 270 > th dose dependent rect. 16 1
719 70.79 wind 1.0 90 > th dose dependent rect. 19 2
738 70.81 temperature 30.0 10 > th dose independent sin 8 NA
756 70.82 radiation 20.0 270 < th dose independent rect. 6 2
831 70.86 precipitation 0.1 270 < th dose independent rect. 5 16
832 70.86 radiation 10.0 30 < th dose independent rect. 21 22
837 70.86 precipitation 0.1 270 < th dose dependent rect. 5 16
842 70.88 temperature 30.0 720 > th dose independent rect. 11 1
855 70.89 humidity 60.0 270 < th dose independent rect. 16 1
870 70.90 precipitation 0.1 90 < th dose independent rect. 19 16
879 70.90 precipitation 0.1 90 < th dose dependent rect. 19 16
886 70.91 wind 7.0 270 < th dose independent rect. 16 5
889 70.91 radiation 1.0 270 < th dose independent rect. 21 9
890 70.91 temperature 30.0 30 < th dose independent rect. 9 10
892 70.91 radiation 40.0 90 < th dose independent rect. 19 16
894 70.91 atmosphere 1015.0 90 < th dose independent rect. 21 22
902 70.92 humidity 60.0 270 < th dose independent rect. 16 3
906 70.92 wind 7.0 90 < th dose independent rect. 11 8
914 70.92 atmosphere 1015.0 10 < th dose dependent rect. 8 2
936 70.93 wind 1.0 10 > th dose dependent rect. 20 1
938 70.93 humidity 50.0 10 > th dose dependent rect. 20 1
977 70.95 wind 5.0 10 < th dose dependent rect. 8 2
978 70.95 radiation 1.0 270 < th dose dependent rect. 21 10
988 70.96 humidity 50.0 90 > th dose dependent rect. 19 2