Os01g0603700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0603700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 168.75 | 0.61 | 5.28 | 2.94 | 0.162 | -0.984 | 0.122 | 3.46 | 0.954 | 8.23 | 21.57 | 1363 | -- | -- |
| 181.07 | 0.627 | 5.41 | 1.87 | 0.155 | -0.691 | 0.0801 | -- | 0.634 | 7.01 | 22.09 | 2663 | -- | -- |
| 168.72 | 0.605 | 5.28 | 2.95 | 0.162 | -1.01 | -- | 3.53 | 0.954 | 7.56 | 21.75 | 1335 | -- | -- |
| 179.02 | 0.623 | 5.41 | 1.88 | 0.186 | -0.659 | -- | -- | 0.638 | 8.88 | 21.84 | 1412 | -- | -- |
| 170.01 | 0.607 | 5.29 | 2.92 | -- | -1.03 | -- | 3.56 | 0.948 | -- | 21.7 | 1235 | -- | -- |
| 196.69 | 0.657 | 5.45 | 1.62 | 0.179 | -- | 0.139 | -- | 0.485 | 9.75 | -- | -- | -- | -- |
| 196.76 | 0.657 | 5.45 | 1.62 | 0.18 | -- | -- | -- | 0.485 | 9.55 | -- | -- | -- | -- |
| 176.52 | 0.619 | 5.46 | 1.83 | -- | -0.756 | -- | -- | 0.462 | -- | 27.3 | 1059 | -- | -- |
| 258.69 | 0.749 | 5.5 | -- | 0.138 | -0.434 | -- | -- | 0.258 | 6.93 | 28.7 | 1079 | -- | -- |
| 198.66 | 0.659 | 5.45 | 1.62 | -- | -- | -- | -- | 0.486 | -- | -- | -- | -- | -- |
| 266.12 | 0.763 | 5.49 | -- | 0.18 | -- | -- | -- | 0.305 | 8.87 | -- | -- | -- | -- |
| 259.52 | 0.75 | 5.5 | -- | -- | -0.464 | -- | -- | 0.253 | -- | 28.5 | 1012 | -- | -- |
| 267.97 | 0.764 | 5.49 | -- | -- | -- | -- | -- | 0.306 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 164.95 | temperature | 10 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 3 | 164.96 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 2 |
| 5 | 165.04 | temperature | 20 | 1440 | > th | dose dependent | rect. | 12 | 7 |
| 19 | 165.38 | humidity | 60 | 14400 | < th | dose independent | rect. | 17 | 16 |
| 35 | 165.63 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 15 | 5 |
| 42 | 165.67 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 15 | 4 |
| 45 | 165.68 | wind | 1 | 43200 | > th | dose independent | rect. | 8 | 3 |
| 82 | 165.96 | temperature | 10 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 90 | 166.02 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 15 | 4 |
| 105 | 166.13 | temperature | 10 | 1440 | > th | dose dependent | rect. | 15 | 3 |
| 117 | 166.21 | humidity | 60 | 14400 | < th | dose independent | rect. | 17 | 3 |
| 118 | 166.22 | wind | 1 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 139 | 166.29 | wind | 9 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 153 | 166.35 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 155 | 166.38 | wind | 5 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 188 | 166.64 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 192 | 166.64 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 18 | 1 |
| 233 | 166.81 | humidity | 60 | 14400 | > th | dose independent | rect. | 17 | 3 |
| 243 | 166.84 | wind | 5 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 254 | 166.89 | humidity | 60 | 14400 | > th | dose independent | rect. | 17 | 7 |
| 255 | 166.89 | humidity | 60 | 14400 | > th | dose independent | rect. | 17 | 10 |
| 279 | 166.96 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 304 | 167.09 | temperature | 20 | 1440 | > th | dose dependent | sin | 21 | NA |
| 308 | 167.10 | wind | 3 | 43200 | > th | dose dependent | rect. | 5 | 16 |
| 317 | 167.15 | wind | 3 | 43200 | > th | dose dependent | sin | 22 | NA |
| 318 | 167.15 | wind | 1 | 43200 | > th | dose dependent | rect. | 9 | 7 |
| 338 | 167.22 | wind | 3 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 353 | 167.28 | wind | 9 | 43200 | < th | dose dependent | rect. | 9 | 7 |
| 372 | 167.34 | wind | 3 | 43200 | > th | dose dependent | rect. | 11 | 20 |
| 385 | 167.40 | wind | 3 | 43200 | > th | dose dependent | rect. | 9 | 13 |
| 433 | 167.52 | wind | 9 | 43200 | < th | dose dependent | rect. | 8 | 9 |
| 443 | 167.55 | wind | 5 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 476 | 167.62 | wind | 3 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 490 | 167.66 | wind | 5 | 43200 | < th | dose independent | rect. | 5 | 15 |
| 499 | 167.69 | wind | 5 | 43200 | < th | dose independent | sin | 21 | NA |
| 551 | 167.78 | wind | 9 | 43200 | < th | dose dependent | sin | 0 | NA |
| 556 | 167.81 | wind | 5 | 43200 | < th | dose independent | rect. | 10 | 7 |
| 558 | 167.81 | wind | 5 | 43200 | < th | dose independent | rect. | 9 | 12 |
| 566 | 167.81 | wind | 9 | 43200 | < th | dose dependent | rect. | 3 | 18 |
| 628 | 167.93 | wind | 5 | 43200 | > th | dose independent | sin | 20 | NA |
| 640 | 167.96 | wind | 5 | 43200 | > th | dose independent | rect. | 9 | 11 |
| 647 | 167.97 | wind | 5 | 43200 | < th | dose independent | rect. | 13 | 18 |
| 665 | 168.00 | wind | 5 | 43200 | > th | dose independent | rect. | 10 | 7 |
| 733 | 168.08 | wind | 5 | 43200 | > th | dose independent | rect. | 11 | 13 |
| 744 | 168.09 | wind | 5 | 43200 | > th | dose independent | rect. | 6 | 14 |
| 749 | 168.09 | humidity | 60 | 14400 | < th | dose dependent | rect. | 17 | 16 |
| 837 | 168.20 | humidity | 80 | 43200 | > th | dose independent | rect. | 21 | 4 |
| 869 | 168.23 | wind | 9 | 43200 | < th | dose dependent | rect. | 9 | 21 |
| 885 | 168.26 | wind | 3 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 887 | 168.26 | wind | 5 | 43200 | > th | dose independent | rect. | 13 | 18 |
| 929 | 168.32 | wind | 5 | 43200 | > th | dose independent | rect. | 14 | 11 |