Os01g0602400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Cytochrome P450 monooxygenase CYP72A5 (Fragment).
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Os01g0602400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Cytochrome P450 monooxygenase CYP72A5 (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 183.74 | 0.637 | 11.5 | 3.35 | 1.02 | -2.13 | -1.61 | -5.8 | 0.818 | 3.06 | 0.3876 | 4312 | -- | -- |
| 197.45 | 0.654 | 11.7 | 2.87 | 1.39 | -1.08 | -1.68 | -- | 0.623 | 3.23 | 4.819 | 7664 | -- | -- |
| 181.82 | 0.628 | 11.5 | 3.25 | 1.4 | -2.17 | -- | -5.66 | 0.804 | 3.23 | 0.695 | 13376 | -- | -- |
| 202.07 | 0.662 | 11.7 | 2.76 | 1.36 | -1.17 | -- | -- | 0.583 | 3.26 | 4.58 | 7668 | -- | -- |
| 247.5 | 0.733 | 11.5 | 3.56 | -- | -1.82 | -- | -5.55 | 0.879 | -- | 0.5813 | 15759 | -- | -- |
| 217.83 | 0.692 | 11.6 | 2.74 | 1.09 | -- | -1.39 | -- | 0.842 | 3.01 | -- | -- | -- | -- |
| 224.27 | 0.701 | 11.6 | 2.77 | 1.08 | -- | -- | -- | 0.85 | 3.04 | -- | -- | -- | -- |
| 256.78 | 0.75 | 11.6 | 2.78 | -- | 0.595 | -- | -- | 0.884 | -- | 9.071 | 11395 | -- | -- |
| 229.97 | 0.706 | 11.8 | -- | 1.49 | -2.06 | -- | -- | 0.36 | 3.33 | 5.167e-08 | 47520 | -- | -- |
| 291.27 | 0.797 | 11.6 | 2.81 | -- | -- | -- | -- | 0.878 | -- | -- | -- | -- | -- |
| 425.85 | 0.965 | 11.7 | -- | 1.14 | -- | -- | -- | 0.542 | 3.05 | -- | -- | -- | -- |
| 267.65 | 0.762 | 11.9 | -- | -- | -2.36 | -- | -- | -0.187 | -- | 0.89 | 47520 | -- | -- |
| 499.79 | 1.04 | 11.7 | -- | -- | -- | -- | -- | 0.566 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 178.00 | temperature | 20 | 720 | > th | dose dependent | rect. | 1 | 10 |
| 2 | 178.19 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 12 |
| 3 | 178.29 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 14 |
| 7 | 178.64 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 10 |
| 9 | 179.11 | radiation | 1 | 14400 | < th | dose dependent | rect. | 5 | 12 |
| 11 | 179.13 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 12 |
| 15 | 179.28 | temperature | 20 | 720 | > th | dose dependent | sin | 7 | NA |
| 19 | 179.34 | radiation | 1 | 14400 | < th | dose dependent | rect. | 23 | 18 |
| 22 | 179.35 | radiation | 1 | 14400 | < th | dose dependent | rect. | 1 | 16 |
| 26 | 179.37 | radiation | 1 | 14400 | < th | dose independent | rect. | 6 | 11 |
| 27 | 179.37 | radiation | 1 | 14400 | < th | dose dependent | rect. | 3 | 14 |
| 32 | 179.39 | radiation | 1 | 14400 | > th | dose independent | rect. | 6 | 11 |
| 33 | 179.44 | radiation | 1 | 14400 | < th | dose dependent | rect. | 9 | 9 |
| 63 | 180.07 | radiation | 1 | 43200 | < th | dose dependent | rect. | 12 | 23 |
| 66 | 180.09 | radiation | 1 | 43200 | < th | dose dependent | rect. | 7 | 22 |
| 69 | 180.09 | radiation | 1 | 43200 | < th | dose dependent | rect. | 16 | 23 |
| 71 | 180.10 | radiation | 1 | 43200 | < th | dose dependent | rect. | 7 | 19 |
| 85 | 180.12 | radiation | 1 | 43200 | < th | dose dependent | no | NA | NA |
| 100 | 180.12 | radiation | 1 | 43200 | < th | dose dependent | rect. | 3 | 21 |
| 122 | 180.13 | radiation | 1 | 14400 | < th | dose dependent | sin | 1 | NA |
| 149 | 180.14 | radiation | 1 | 43200 | < th | dose dependent | rect. | 10 | 23 |
| 197 | 180.21 | radiation | 1 | 43200 | < th | dose dependent | sin | 23 | NA |
| 210 | 180.22 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 17 |
| 239 | 180.28 | radiation | 1 | 43200 | < th | dose dependent | rect. | 3 | 7 |
| 248 | 180.29 | radiation | 1 | 43200 | < th | dose dependent | sin | 8 | NA |
| 255 | 180.29 | radiation | 1 | 43200 | < th | dose dependent | rect. | 22 | 13 |
| 283 | 180.34 | humidity | 90 | 43200 | > th | dose dependent | rect. | 23 | 1 |
| 305 | 180.35 | radiation | 1 | 43200 | < th | dose dependent | rect. | 12 | 14 |
| 487 | 180.63 | radiation | 1 | 43200 | < th | dose dependent | rect. | 16 | 2 |
| 531 | 180.86 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 564 | 181.03 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 23 |
| 589 | 181.14 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 594 | 181.15 | radiation | 1 | 14400 | > th | dose independent | rect. | 6 | 13 |
| 602 | 181.15 | radiation | 1 | 43200 | < th | dose independent | rect. | 7 | 19 |
| 687 | 181.24 | temperature | 20 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 722 | 181.30 | radiation | 1 | 14400 | > th | dose independent | sin | 23 | NA |
| 728 | 181.31 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 23 |
| 729 | 181.31 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 741 | 181.34 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 11 | 3 |
| 774 | 181.39 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 776 | 181.39 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 5 | 3 |
| 780 | 181.40 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 806 | 181.43 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 11 | 12 |
| 807 | 181.43 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 18 | 14 |
| 822 | 181.44 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 824 | 181.45 | temperature | 15 | 43200 | > th | dose dependent | rect. | 2 | 1 |
| 829 | 181.45 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 13 | 10 |
| 858 | 181.47 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 18 | 10 |
| 867 | 181.47 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 11 | 21 |
| 884 | 181.48 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 11 | 19 |
| 885 | 181.48 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 13 | 19 |
| 888 | 181.48 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 18 | 20 |
| 895 | 181.49 | atmosphere | 1005 | 43200 | > th | dose dependent | sin | 15 | NA |
| 911 | 181.49 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 13 | 17 |
| 916 | 181.49 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 3 | 20 |
| 946 | 181.50 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 5 | 18 |
| 960 | 181.51 | temperature | 20 | 43200 | < th | dose independent | rect. | 5 | 1 |